Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01139 ATTATAAATCTAACGCAAAGCCTCATCTGAACTCTCTCTTCTCTTACTCTGCTCCAAAGCCACCAATGTTGTCTCTCAGGCTAACCTCGTTAACCCATCTCTTCTCTCCGCCCTCTTCCACCGCCATCGCTCGCCGTTCCCCGGCGATTCTCCGGCGCCGAAACCACCACCTCCGGCCACGCCCACTCGCCGCCTCGTTCTCCTCCCAGAGCGCGGCGGCGGAGACTCAGGACCGAGTGGACAACTCGAAGAACCGAGTCAGCGACCGAGTCATCACGCCACGGTCACAGGACTTCAACGCGTGGTACCTTGACGTCATCGCCAATGCTGAGTTGGCTGATTACGGTCCGGTTCGCGGCACCATGGTCATTCGTCCCTACGGTTACGCCATTTGGGAAGCCATTCAGGAGTTTTTGAATGTCAAGTTCAAGGAGACTGGCCATAGTAACATGTATTTTCCGCAGTTTATTCCATACTCATTTATAGAGAAAGAAGCAAGTCATGTTGAGGGTTTTAGTCCTGAGTTAGCACTAGTGACAATTGGGGGTGGAAAAGAACTTGAAGAGAAGCTCGTGGTCCGGCCTACAAGCGAAACCATTGTAAATCATATGTTTACTCAATGGATCCATAGCTACCGTGATCTTCCTCTCTTGATTAATCAGTGGGCAAACGTGACAAGATGGGAAATGCGCACTAAACCATTTGTGAGAACTCTTGAATTTCTTTGGCAAGAAGGACATACTGCTCATGCAACTCCAGAGGAAGCAGAAAAAGAGGCTATACAGATGATTGACATTTATACCAGATTTGCATATGAGCAAGCTGCAATACCTGTTATTACAGGTCGAAAATCTAAAGTGGAAACATTTGCTGGTGCTTGTAAGACCTATACAATTGAGGCTATGATGGGTGATAAGAAAGCATTACAAGCAGGAACCAGTCATAATCTTGGGCAAAACTTTGCCCGAGCCTTTGGAACACAGTTCACAGATGAAAGTGGAGTAAGAGAATATGTTTGGCAGACATCATGGGCAATTAGTACCCGCTTTGTTGGGGGCATCATAATGACACATGGAGATGATGCAGGCTTAATGCTTCCCCCAAAGATTGCACCAATACAGGTGGTAATTGTACCCATTTGGAAGAAGGATGATGAAAAGGCAGCGGTTCTAAATGCAGCATCATCCGTAAAAGATGTTCTTCTAACATCTGGGATTAAAGTTAAACTTGATGACTCTGATCAAAGAACCCCTGGATGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCCTCTTAGAATTGAAATTGGTCCTCGTGATGTGGCAAGTGGAAGTGTGGTTATATCCAGGAGAGATATCCCTGGTAAGCAAGGGAAAGTGTTTGGAATATCTATGGAGCCTTCAAATTTGGAGGCTTATGTTAAAAACAAATTGGATCAGATACAGTCATCTCTTTTGGCAAGGGCTATTGCATTTCGAGACAGTAACATCATAGATGTGAGCACATACGATGATCTAAAAGCTGCAATCTCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGTGATGAAGATGAATTAAAAGTGAAAGAGGAAACCAGAGCAACTATTAGCCACAAGGGATTAAAAAGATGCTTGATGACTGGCAATCCTGCTGAAGAAGTGGCTATTTTGCCAAATCGTACTAACTTTCCG 1697 0.4537 MLSLRLTSLTHLFSPPSSTAIARRSPAILRRRNHHLRPRPLAASFSSQSAAAETQDRVDNSKNRVSDRVITPRSQDFNAWYLDVIANAELADYGPVRGTMVIRPYGYAIWEAIQEFLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAIQMIDIYTRFAYEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFARAFGTQFTDESGVREYVWQTSWAISTRFVGGIIMTHGDDAGLMLPPKIAPIQVVIVPIWKKDDEKAAVLNAASSVKDVLLTSGIKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVASGSVVISRRDIPGKQGKVFGISMEPSNLEAYVKNKLDQIQSSLLARAIAFRDSNIIDVSTYDDLKAAISQGKWARGPWSASDEDELKVKEETRATISHKGLKRCLMTGNPAEEVAILPNRTNFP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01139 544 Pfam Anticodon binding domain 352 454 IPR004154 -
Pste9g01139 544 NCBIfam proline--tRNA ligase 71 536 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 Hamap Proline--tRNA ligase [proS]. 70 541 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 Gene3D Bira Bifunctional Protein; Domain 2 71 345 IPR045864 -
Pste9g01139 544 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 97 345 IPR006195 -
Pste9g01139 544 PANTHER PROLYL-TRNA SYNTHETASE 47 515 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 SMART ProRS_C_1_2 481 537 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 PRINTS Prolyl-tRNA synthetase signature 128 146 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 PRINTS Prolyl-tRNA synthetase signature 208 219 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 PRINTS Prolyl-tRNA synthetase signature 169 180 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 PRINTS Prolyl-tRNA synthetase signature 199 207 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 SUPERFAMILY Class II aaRS ABD-related 341 473 - -
Pste9g01139 544 CDD ProRS_anticodon_zinc 341 537 - -
Pste9g01139 544 MobiDBLite consensus disorder prediction 42 56 - -
Pste9g01139 544 CDD ProRS_core_arch_euk 76 335 IPR033721 -
Pste9g01139 544 MobiDBLite consensus disorder prediction 40 67 - -
Pste9g01139 544 FunFam Proline--tRNA ligase 65 345 - -
Pste9g01139 544 Gene3D - 346 469 IPR036621 -
Pste9g01139 544 FunFam Proline--tRNA ligase, chloroplastic/mitochondrial 346 470 - -
Pste9g01139 544 SUPERFAMILY Class II aaRS and biotin synthetases 76 339 IPR045864 -
Pste9g01139 544 SUPERFAMILY C-terminal domain of ProRS 476 536 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 Gene3D - 475 537 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Pste9g01139 544 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 164 333 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01139 Pste-Chr9 8667380 8672999 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01139 9 8667380 8672999 Pste9g01139 9 8667380 8672999 ECH