Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01106 ATGCCTGATCTTATCAATTCTCGTAGTTGGCTGCAAATGATTGCCAAGCTACCAAAACTAAGAGAATTGAGTTTACAAGAATGTGGCCTTTCCGATCATTTTATCCTTTCATTGAGTCCTTCTAATTACAACTTTTCTTCTTCCCTTTCGGTCCTTGATCTTTCTGAGAATAGTTTCACATCATCACTAATACTCCAATGGGTGTCAAACATCACTACCAACCTTGTTGAGCTTGACCTTAGTCATAACCACTTGGAGGGTTCCATATCAAATCATTTTGGCATGGTAATGAATTCGCTTGAGCACCTTGACCTATCCCTTAATATGTTCAAGGGTGATGTTTTGAAATCCTTCATGAATATATGCACCCTACATTCTTTAAACATGCAAGGAAACAATTTGACTGAAGACCTTCCATCTATTCTTCATAATTTGTCTAGTGGTTGTATTCGATACTCTTTACAAGATTTGGATCTATCATTTAATCAAATCACTAGCTCTTTTTCTGACCTTTCAGTATTCTCTTCTTTGAAAATGTTAGATCTTTCTTTCAATCAATTAAATGGGAAGATATCTGAAGGTGTTAGAATACCATATCAATTGGAATCTTTGTCAATCCAACAAAACTCTTTAGAAGGTGGAATTCCAATATCGTTTAGAAATGCATGTGCTTTGAGCTCGTTGGACTTGTCTAGTAATAATTTGAATCAAGAGCTTCCAATGATGATTCATCACTTGTCTGGGTGTGCTAGATACTCGCTGCGAGACTTGAACTTGGCACAAAATCAAATCAATGGTATGCTGCCCGATCTTTCAACATTTTCAATCTTGAAAACATTGGATCTTTCAGAAAATCAATTAAGTGGAAAGATACCAAAAGCTAACAAATTGCCTTCCCAATTGGAGTTTTTGTCAATCCAATCGAACACTTTAGAAGGTGGACATGTTTCCTTCAAGAATGCATGTGCTTTACGCTCATTAGACTTGTCTAATAATAGCTTGAATGAAGATTTTCCAATGATAATTCATCACTTATCTTGTGCTAGATATTCATTGGAAACTTTAGATCTAAGCATGAATCAAATCAATGGCACGCTACCTGACCTCTCAATATTCTCATCTTTGAAAAGTTTATATCTTTTCGAAAACAAGCTAAAAGGAGACATTCCTAAAGATATTCGGTTTCCACCTCAATTGATGGATCTACATATGCAATCAAACTCCTTAAAAGGTGTGCTCAATGACTATCATTTTGTGAATATGTCTAAGTTAGGTTCATTGGATTTATCTGACAACTTATTGACCTTGACATTTACTAAAAAATGGGTCCCACATTTTCACTTAAGGACCATGAGATTGCGATCTTGCAAGCTAGGTCCAACATTTCCCAAATGGTTGGAAACACAAAATGACTTTCTTGATCTTGACATTTCAAATGCTGGAATATCAGATAAGGTTCCAAGGTGGTTTTGGGCTAAATTAGCATTGCGAGAACATCCAGATGGAGAAGGGATTTTGATGAATATTTCATACAATAACTTCTATGGTATAATTCCAAGTTTTCCACTAAAGAAAATTTATCATTCTCTGATTCTCAGTTCAAATCAATTTGAAGGTCATATTCCACCATTTCTACGAGGTTTCTTACTTGATTTATCCAAAAATAAATTCTCAGATTCTTTTTCATTCTTATGTGGGAATGATACAGTTATAACTTCACATCAATTAGACCTTTCAAATAATCATTTATCTGGACAAATTCCAGATTGTTGGAGCCATTTTGAGACATTATCTTATTTAGATTTAAGTCACAATAACTTTTCAGGAAAGATACCTACATCCATCAGGTTTCTTCTTGGTCTTCAAGCATTACTAATGAGGAACAACAACTTAATAGATGAGATTCCTTTCTCCCTTGGGAGTTGCACAAACCTAGTAATGCTAGATATGGCAGAAAACAAATTATCAGGGTCTATCCCTACTTGGATTGGAAGTCAAATGGAAAAGTTGCAAATTTTGAGTTTGGGAATGAATCATTTCAATGGAAGTTTACCACTGCAAATTTGTTATCTAAGAAACATTCAACTCTTAGATCTTTCAATAAACGAGTTGTCTGGAAAAATTCCTAAATGCATACAAAATTTTACTGCAATGGCTCAAAAGATGTCTTCAACTTATTATCAAGACCATAAGTATTATATCAGCACTGGTGGTGAGCCATTCACTAAATCATTTGATTTGAAAGCACTCATGATGTGGAAAGGTTTAGAACAAATGTTCAACAATAAGGAATTGTCACTTTTAAAAAGCATTGATCTCTCAAGCAATCACTTTTCAGAAGAAATCCCAGTAGAAATAGAGAATTTATTTGATTTGGTTTCGTTGAATTTATCAAGAAACAATTTGGCAGGAAAAATTCCTTCAAATATTGGAAGGTTAACTTCACTTGAATTTCTTGATTTGTCAAGAAACCAAATTATTGGTTCAATCCCTCTAAGTCTTACTCAAATAGATCGACTTGCCATGCTAGATTTGTCACATAACCATCTATCTGGAGAAATTCCAACTGCCACACAATTACAAAGTTTCAATGTGTCGAGTTATGAAGATAACCTAAATCTTTGTGGGCCACCACTGGAGAAATTGTGTATTTTTAGAGGGTCAACACAAGAACCAAATGTTGAAATCCATGAGGATGAATATTCACTTTTCAGACGTGAATTTTACATAGGTATGGCAATTGGATTTGTTATAAGCTTTTGGGTGGTATTTGGCTTAATCTTATTCTGGCGTTCTTGGCAACATGCCTATGTCATGTTCTTGAACAATTTAGCAGACAATATTTATGTCAAGGTAGCAGTGTTCGCTAATAAAATATCGAGAACGTCGAACACTTAG 2898 0.3461 MPDLINSRSWLQMIAKLPKLRELSLQECGLSDHFILSLSPSNYNFSSSLSVLDLSENSFTSSLILQWVSNITTNLVELDLSHNHLEGSISNHFGMVMNSLEHLDLSLNMFKGDVLKSFMNICTLHSLNMQGNNLTEDLPSILHNLSSGCIRYSLQDLDLSFNQITSSFSDLSVFSSLKMLDLSFNQLNGKISEGVRIPYQLESLSIQQNSLEGGIPISFRNACALSSLDLSSNNLNQELPMMIHHLSGCARYSLRDLNLAQNQINGMLPDLSTFSILKTLDLSENQLSGKIPKANKLPSQLEFLSIQSNTLEGGHVSFKNACALRSLDLSNNSLNEDFPMIIHHLSCARYSLETLDLSMNQINGTLPDLSIFSSLKSLYLFENKLKGDIPKDIRFPPQLMDLHMQSNSLKGVLNDYHFVNMSKLGSLDLSDNLLTLTFTKKWVPHFHLRTMRLRSCKLGPTFPKWLETQNDFLDLDISNAGISDKVPRWFWAKLALREHPDGEGILMNISYNNFYGIIPSFPLKKIYHSLILSSNQFEGHIPPFLRGFLLDLSKNKFSDSFSFLCGNDTVITSHQLDLSNNHLSGQIPDCWSHFETLSYLDLSHNNFSGKIPTSIRFLLGLQALLMRNNNLIDEIPFSLGSCTNLVMLDMAENKLSGSIPTWIGSQMEKLQILSLGMNHFNGSLPLQICYLRNIQLLDLSINELSGKIPKCIQNFTAMAQKMSSTYYQDHKYYISTGGEPFTKSFDLKALMMWKGLEQMFNNKELSLLKSIDLSSNHFSEEIPVEIENLFDLVSLNLSRNNLAGKIPSNIGRLTSLEFLDLSRNQIIGSIPLSLTQIDRLAMLDLSHNHLSGEIPTATQLQSFNVSSYEDNLNLCGPPLEKLCIFRGSTQEPNVEIHEDEYSLFRREFYIGMAIGFVISFWVVFGLILFWRSWQHAYVMFLNNLADNIYVKVAVFANKISRTSNT 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01106 965 Pfam Leucine Rich Repeat 74 93 IPR001611 GO:0005515
Pste9g01106 965 Pfam Leucine Rich Repeat 597 618 IPR001611 GO:0005515
Pste9g01106 965 ProSiteProfiles Leucine-rich repeat profile. 276 298 IPR001611 GO:0005515
Pste9g01106 965 ProSiteProfiles Leucine-rich repeat profile. 74 96 IPR001611 GO:0005515
Pste9g01106 965 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
Pste9g01106 965 SUPERFAMILY L domain-like 298 548 - -
Pste9g01106 965 SUPERFAMILY RNI-like 10 364 - -
Pste9g01106 965 PANTHER OS10G0469600 PROTEIN 317 559 - -
Pste9g01106 965 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 507 725 - -
Pste9g01106 965 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 760 883 - -
Pste9g01106 965 SUPERFAMILY L domain-like 550 880 - -
Pste9g01106 965 Gene3D Ribonuclease Inhibitor 250 500 IPR032675 -
Pste9g01106 965 ProSiteProfiles Leucine-rich repeat profile. 351 373 IPR001611 GO:0005515
Pste9g01106 965 Gene3D Ribonuclease Inhibitor 5 249 IPR032675 -
Pste9g01106 965 Gene3D Ribonuclease Inhibitor 505 885 IPR032675 -
Pste9g01106 965 PRINTS Leucine-rich repeat signature 277 290 - -
Pste9g01106 965 PRINTS Leucine-rich repeat signature 813 826 - -
Pste9g01106 965 SMART LRR_sd22_2 198 219 - -
Pste9g01106 965 SMART LRR_sd22_2 174 197 - -
Pste9g01106 965 SMART LRR_sd22_2 72 94 - -
Pste9g01106 965 SMART LRR_sd22_2 813 834 - -
Pste9g01106 965 SMART LRR_sd22_2 691 717 - -
Pste9g01106 965 SMART LRR_sd22_2 153 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01106 Pste-Chr9 8123227 8126124 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01106 16 929 Receptor kinase-like Gene Family AT2G15080 31.540 5.74e-85 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01106 9 8123227 8126124 Pste9g01106 9 8123227 8126124 ECH