Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01029 TTCAATGGGTGTAGTAGAAGTGCTGAAGCTAAGTGCATAGAGAGGGAAAGACAAATATTTCTCAACTTCAAACAAGGTCTCATAGATGTGTATGGCATGCTTTCTTTACGGAGGGATGATGACAATAGTAAAAATTGTTGCAAATGGAAAGGCATTCAATGTGACAATGAAACAGGTCGTTCAAATGCATATCCCAGAAGACATTGGCTCCTTCAAAAACTTCAGATATCTCGATTATCATATATAAGCTTGGTTGGGAGGATTCCTTATGAGCTGGGACATCTCTCAAAGTTGGATGGAACTAATCTTTTCGGAGGAATCCCTTTTGAAATTGGGAATCTTCGAGTCTTGCATACTCTTAAGCTTGGTGAGAATTTGGATGTCAAATCTATTGATACAAGTCCTATCCTAGATGTATTTGGGAAAGTAATGAGCTTTCTAGAAGATCTTTTGCAACAATTATTCCTTCATAATGACAGCTTGAGTGGGAAAATTTCTAGCTTTATAAAGAACTTTTCAAGGTGCAACAACACTAGAATGCTACCTAATCTTTCAAATTTGGCATCTTTGAGGACTTTAGATCTTTCCTATAACAAGTTAACAGGAGAAATACCTAAAAACATTGGATTTGTATATGATCCCTTCACCTTGAGGAGAATTACTTGGAAAGGTGGCATCACTGAATCACATCTCCCAAGTTTATCCAAATTGGAAGAGATAGCCTTAACAACCAATTCATTGTCTTTGAAGTTTGACACTACTTGGGTCCCTCTTTTCCAATTATTTTTTTTGGAGCCAACTTTTTGCAAGTTAGGTTCTAGTTTCCAAAATATATCTGATGCTGGGATTGATGACTTTGTACCGTGGTTTTGGAACAAGTTACAATTTATATATGCCATGAATATCTCTTACAACAATCTCAAAGGCACAATTCCAAATTTACCAATTAAGCTTACCATGAATTATCCAATATCAGTGTTACTCAATTCAAATCAATTCGAAGGTGGACTTTCTACTTTTTTGTCACAAGCGCAACTACAAAGATCCAGATTTTGGATTTATCAAATAATGGGACAACTACCTAACTATTGGAAACATCTAAATTCATTACAAATTGTTGATTTAAGCAACAATAGATTGTCTAGGAAGATTCCAAAGGCCATGGGTAGTCTTATTCTTGGTGTGAGTGAAAATTTTATTGTTTGGTCCAATACCCTCATTGGAGAAAGCCTACAACAACTGGAAATCTTGAGCTTGCGAGTAAATCTTTTCTCTGGAAGTGTTCATGTGCATCTTTGCTATTTGAGGCAAATTTATCTCTTGGATCTTTCAAGAAATAACTTGACAGAAAGAATTCCATCTTGTCTAAACAATTTTTCTGCAATGGTAGTAAGGAGTGCATCCACAAGAAAAATTGTAACGAGAGAAAGATTGAAATATGAAAATGTGTACTCATCTAATTATTATAACTCTGATGTGTTAATGATGTGGAAGGGAACATTTGTATTGGAATCCTGTCTCACTTCTGAGGAGCTTGATCTCTCAAGTAATCATTTAACAAGTAAACTACCAAAAGAGGTCGAATATTTACTTGAATTAATTTCTTTAAATTTATCAAGAAACAACCTAAGTGGAGAAATTCTTTCTTGGATTGGGAATTTAAGTTCACTAGATTTTCTTGATTTATCAAGAAATCATTTCTCTGGTGAAATTCCTTCAACTATTTCCAAAATTGATCGTCTTTCTACGTTAGACTTATTTGAGAACCATCTTATTGGGATAATTCCTTGGGCTAGACAGTTGCAGACTTTTAGTGCCTCCACTTTTGATGGAAATATTGATCTATGTGGTGAACCACTTAAGAAAATCTACCTGGAGATTCACATACAACTACTTGATCTTCATGGTCTGGATATCATTGGTGCAGTCAATCTCGCTTTATTAATTGACTTGCAAAATCTTCAATATCTTGATCTCAGTCATAATAATTTTCTATTGAGTCATATCCCACAACTCATTGGCTCTTTCACCAACTTAACATATCTCAATCTCTCATTTTCTGGATTTGGAGGGAGGATTCCTTCTACACTTGGAAATCTTGCACAACTCCAGTATCTAGACCTCGGGGGAAATGATCTTTTGGGAGCAATTCCTTTTCAGATTGGAAATCTCAAACACTTGCAATATCTTGATCTTGGAGACAATTCTCTTTCGGGAGAAATCCCATTTCAATTTGGCAATCTCAAACAGCTACAATATCTTAATCTTGCAAGTAATACTCTTTCTGGAACAATACCTTTTCGGAGTGGGAATCTTTCTCTCTTGCACACTCTCAGGCTAAGTGGCAATTTTGAAGTAAAAGCTAAGGATGCAGAGTGGTTGTCTAATCTTTATTCCTTAGCAATTCTTGAGTTGAGTTCATTGCATAACCTTAGCTCTTCTGCTGAGTGGCTACAAGCTATCAATAAGCTTATTCCAAACTTAAGAGAATTGAGACTTGCTGATTGTTCTCTTTCAGATGCTTATATCAAATCTTTGTTTTATTCTCATTCCAACTTTTCTTCTGCTCTTACCTATCTTGATCTTTCTTATAATGTGCTAACATCCTCAACATTTCAATCATTGTTCAATTTTAGTCTTAAGCTTCAGGAGCTTTATCTTTCTCATAATAACATCGGTTTGTTATCTTCTCTCAAACCAAATTTTCCATCTCTTAAGATCCTTGACCTCTCTGCTAACAATCTAACATCATCAGTTATGCAAGGCCATTTCAATATCAGCTCCAAACTACGAGAGCTTCATCTACAAAACTGCAGTCTTATGGATAGAAGTTTCCTCGTTTCATCTACTTCCACAATGAATTCTTCATCTTCTCTTGCCATCCTTGATCTCTCCTACAATTTGTTGAAATCGGATGCTATGTTTTACTGGCTTTTTAACTTCACCACCAATCTTCGTACACTTTCCATTGATGGTAACTTGTTTGAAGGTCCCATTCCAGATGGGTTTGGGAAAGTAATGAACTTTGTTGAAGATCTTTCTCTTTACAACAATAGACTGCAAGGCAATATTCCATATTTCTTGGGAAACATGTGCAGATTACAAAGCTTAGACCTCTCATTTAACAAGTTGAATGGGGAAATTTCTAGCTTCATTCAAAATTCTTCATGGTGCAACAGACAAGTATTGCACAGATTATATTTATCTTATAACCAAATTATAGGCAAGATACCTGAAAGGATCGGATGGCTATCTGAGTTGCAGGAGTTATACTTGCAGGGGAATTTTTTAGATGGTGAGGTCACTGAATCCCATCTTTCTAATTTTTCTAAATTAAAACACTTACACTTATCACACAACTCATTGTCTCTACATCTTGTCCCTACCTGGGTTCCTCCTTTTCATTTACATTCCTTGGGTTTAGCATCTTGTAGGGTAGGTCCTAGTTTTCCTAGTTGGCTCCAGACCCAAAGTTCCTTAACCTTTGTGGATGTATCTAATAATGGACTAAGTGGTTCCGTACCAAGATGGTTTTGGAACAACTTGCAAATTATGTACTGGTTGAACATGTCTCACAGTAATCTCGCTGGTGCTATTCCTAATATACCATTCAAGCTTCTTCACAGGCCATCCATAATTTTAAATTCAAATCAATTTGAAGGTCAGGTTCCCTCATTTTTGCTTCAAGCTTCTGAGTTGTTGCTCTCTCAAAATAAATTTTCAGATTTGTTACCATTCTTATGTGACCAAAGCACAACTGCCAACTTGGTCAGTCTAGATTTGTCAAACAACCAAATAAAGGGAGAACTTCCAGATTGTTGGAAACCTGTTGATCCTCTACAGTTTCTTGATTTAAGCAGCAATACATTGTCAGGAAATATTCCTATGTCCATGGGCACCCTTGTTAAATTGGATGCCTTGATTTTACGAAACAATAGTTTAATGGGGGTATTGCCTTACACTTTGAAGAATTGCAGCAATTTAATTATGCTAGATGTGAGTGAAAATATGTTGTCTGGTCCAATACCATCTTGGATTGGAGAAAGCATGCAGCAATTGATCATCTTGAGCATGCGGGGGAATAACTTCTCCGGAAAGTTTGCAACTGAACTCTGTTATTTAAGGTTTATTCAACTGTTGGATCTTTCAAGGAATAGAATATCACAAGGAATTCCAAAATGCTTAAAGAATTTTACTGCTATGTCTGAAAAGAGCATCAACAGAAGTGAAGTTCGAAGGCATATATATGAGTCCAATATTACTGTGTATAAAATTTATGATATTGAGAAATTTGTTAATTATAGACTTGACATAACATGGGTGTGGAAAGGTTTGAAACAGCGGTTGAAGGATCCCGAATTGATTCTCAAGAGCATCGATCTCTCATGCAACAATTTAACAGGTGAAATACCAAAAGAGGTTGGATATTTGGTTGGTGTAGCTTCTTTGAACTTTTCAAGAAACAAACTGAGTGGAGAAATTCCTTCAGAGATTGGAAATTTAAGCTCACTAGAATCTCTTGACTTATCAAGAAATCATTTGAGTGGGAGAATTCCTTCTTCTCTTGATCAAATTGATTTCCTTGGAAAATTAGACTTAATCCCATTGGGAAGACATTTGGAAACCTTTGATGCCTCTAGTTTTGAAGGAAATATTGATCTTTGTGGTGAGCAACTTAACAAAAGTTGTCTTGGAGATCAGACGACAGTAGTAGTAGAGCCTCAAGTTCCTTCAGGTCATGGAGAAGATTCAGTTTTTTATGAAGCACTGTACTTAAGCATGGGTGTAGGATACTTTGTAGGCTTTTGGGGCTTGGGGCTTAATGGGACCACTACTGATATGGAGACCTTGGAGAATTGCTTACCTGAGATTCTTGGA 4878 0.362 FNGCSRSAEAKCIERERQIFLNFKQGLIDVYGMLSLRRDDDNSKNCCKWKGIQCDNETGRSNAYPRRHWLLQKLQISRLSYISLVGRIPYELGHLSKLDGTNLFGGIPFEIGNLRVLHTLKLGENLDVKSIDTSPILDVFGKVMSFLEDLLQQLFLHNDSLSGKISSFIKNFSRCNNTRMLPNLSNLASLRTLDLSYNKLTGEIPKNIGFVYDPFTLRRITWKGGITESHLPSLSKLEEIALTTNSLSLKFDTTWVPLFQLFFLEPTFCKLGSSFQNISDAGIDDFVPWFWNKLQFIYAMNISYNNLKGTIPNLPIKLTMNYPISVLLNSNQFEGGLSTFLSQAQLQRSRFWIYQIMGQLPNYWKHLNSLQIVDLSNNRLSRKIPKAMGSLILGVSENFIVWSNTLIGESLQQLEILSLRVNLFSGSVHVHLCYLRQIYLLDLSRNNLTERIPSCLNNFSAMVVRSASTRKIVTRERLKYENVYSSNYYNSDVLMMWKGTFVLESCLTSEELDLSSNHLTSKLPKEVEYLLELISLNLSRNNLSGEILSWIGNLSSLDFLDLSRNHFSGEIPSTISKIDRLSTLDLFENHLIGIIPWARQLQTFSASTFDGNIDLCGEPLKKIYLEIHIQLLDLHGLDIIGAVNLALLIDLQNLQYLDLSHNNFLLSHIPQLIGSFTNLTYLNLSFSGFGGRIPSTLGNLAQLQYLDLGGNDLLGAIPFQIGNLKHLQYLDLGDNSLSGEIPFQFGNLKQLQYLNLASNTLSGTIPFRSGNLSLLHTLRLSGNFEVKAKDAEWLSNLYSLAILELSSLHNLSSSAEWLQAINKLIPNLRELRLADCSLSDAYIKSLFYSHSNFSSALTYLDLSYNVLTSSTFQSLFNFSLKLQELYLSHNNIGLLSSLKPNFPSLKILDLSANNLTSSVMQGHFNISSKLRELHLQNCSLMDRSFLVSSTSTMNSSSSLAILDLSYNLLKSDAMFYWLFNFTTNLRTLSIDGNLFEGPIPDGFGKVMNFVEDLSLYNNRLQGNIPYFLGNMCRLQSLDLSFNKLNGEISSFIQNSSWCNRQVLHRLYLSYNQIIGKIPERIGWLSELQELYLQGNFLDGEVTESHLSNFSKLKHLHLSHNSLSLHLVPTWVPPFHLHSLGLASCRVGPSFPSWLQTQSSLTFVDVSNNGLSGSVPRWFWNNLQIMYWLNMSHSNLAGAIPNIPFKLLHRPSIILNSNQFEGQVPSFLLQASELLLSQNKFSDLLPFLCDQSTTANLVSLDLSNNQIKGELPDCWKPVDPLQFLDLSSNTLSGNIPMSMGTLVKLDALILRNNSLMGVLPYTLKNCSNLIMLDVSENMLSGPIPSWIGESMQQLIILSMRGNNFSGKFATELCYLRFIQLLDLSRNRISQGIPKCLKNFTAMSEKSINRSEVRRHIYESNITVYKIYDIEKFVNYRLDITWVWKGLKQRLKDPELILKSIDLSCNNLTGEIPKEVGYLVGVASLNFSRNKLSGEIPSEIGNLSSLESLDLSRNHLSGRIPSSLDQIDFLGKLDLIPLGRHLETFDASSFEGNIDLCGEQLNKSCLGDQTTVVVEPQVPSGHGEDSVFYEALYLSMGVGYFVGFWGLGLNGTTTDMETLENCLPEILG 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01029 1626 ProSiteProfiles Leucine-rich repeat profile. 653 676 IPR001611 GO:0005515
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 627 739 IPR032675 -
Pste9g01029 1626 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1248 1342 - -
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 1213 1570 IPR032675 -
Pste9g01029 1626 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 646 741 - -
Pste9g01029 1626 SUPERFAMILY L domain-like 818 942 - -
Pste9g01029 1626 Pfam Leucine Rich repeat 189 203 IPR001611 GO:0005515
Pste9g01029 1626 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 979 1246 - -
Pste9g01029 1626 SUPERFAMILY RNI-like 172 599 - -
Pste9g01029 1626 SUPERFAMILY RNI-like 511 853 - -
Pste9g01029 1626 FunFam LRR receptor-like serine/threonine-protein kinase 1454 1526 - -
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 1059 1212 IPR032675 -
Pste9g01029 1626 SUPERFAMILY L domain-like 1230 1534 - -
Pste9g01029 1626 SMART LRR_sd22_2 879 900 - -
Pste9g01029 1626 SMART LRR_sd22_2 1253 1279 - -
Pste9g01029 1626 SMART LRR_sd22_2 1501 1524 - -
Pste9g01029 1626 SMART LRR_sd22_2 651 671 - -
Pste9g01029 1626 SMART LRR_sd22_2 1084 1111 - -
Pste9g01029 1626 SMART LRR_sd22_2 367 397 - -
Pste9g01029 1626 SMART LRR_sd22_2 187 210 - -
Pste9g01029 1626 SMART LRR_sd22_2 724 756 - -
Pste9g01029 1626 ProSiteProfiles Leucine-rich repeat profile. 881 902 IPR001611 GO:0005515
Pste9g01029 1626 SUPERFAMILY L domain-like 957 1240 - -
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 12 206 IPR032675 -
Pste9g01029 1626 PANTHER LRR RECEPTOR-LIKE KINASE 702 766 - -
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 826 1058 IPR032675 -
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 740 789 IPR032675 -
Pste9g01029 1626 SMART LRR_typ_2 748 772 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 651 676 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 700 723 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 902 926 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 187 211 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 435 459 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 1501 1529 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 1031 1059 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 1301 1324 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 724 747 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 507 530 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 1084 1108 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 367 391 IPR003591 -
Pste9g01029 1626 SMART LRR_typ_2 554 578 IPR003591 -
Pste9g01029 1626 FunFam Tyrosine-sulfated glycopeptide receptor 1 406 626 - -
Pste9g01029 1626 Gene3D Ribonuclease Inhibitor 215 626 IPR032675 -
Pste9g01029 1626 SUPERFAMILY L domain-like 42 316 - -
Pste9g01029 1626 PRINTS Leucine-rich repeat signature 1034 1047 - -
Pste9g01029 1626 PRINTS Leucine-rich repeat signature 1501 1514 - -
Pste9g01029 1626 Pfam Leucine rich repeat 702 761 IPR001611 GO:0005515
Pste9g01029 1626 Pfam Leucine rich repeat 1456 1514 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01029 Pste-Chr9 7015127 7024851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01029 184 824 Receptor kinase-like Gene Family AT2G15080 25.289 8.09e-20 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01029 9 7015127 7024851 Pste9g01029 9 7015127 7024851 ECH