Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00862 AATATGAGAGAAATAATTAGCATTCATATTGGACAAGCTGGAATTCAGGTTGGTAATTCATGTTGGGAGCTATATTGCCTTGAACATGGCATTCAACCAGATGGAACAATGCCCAGTGATGATGTACATGATGCTTTCAACACTTTCTTCAGTGAAATTGGAACTGGCCAATATGTCCCAAGGGCATTATTTGTTGATCTAGAGCCTAGTGTAATTGATGAAGTAAGGTGTGGTCCTTACAAACAACTCTTTCATCCAGAGCAATTGATGTCTGGCAAGGAAGACGCTGCTAATAACTTTGCAAGGGGACATTACACAGTTGGAAAAGAAATGGAAGAGCTGTGCCTTGACCGTATCAGAAAATTAGCTGACAATTGCACTGGCTTGCAAGGATTCTTGGTTTTCAATGCTGTTGGTGGTGGCACTGGTTCTGGCTTGGGATCATTGCTTTTGGAACGTTTATCTGTAGATTATGGGAAGAAGTCAAAACTTGGCTTCATCATTTATCCTTCTCCTCAGGTATCTACTGCAGTTGTTGAACCATACAATACGGTTCTTTCCAATCACGCGCTCATTGAGCACAGTGATGTAGTTGTGCTTTTGGACAATGAAGCAATATATGACATTTGTAGAAGATCACTAGACATAGAAAGGCCAACTTACACCAACTTGAACCGTTTGATATCTCAAATCATCTCTTCTTTAACCACTTCCTTGAGATTTGATGGTGCAATCAATGTTGACATTTCTGAGTTCCAGACCAACCTTGTGCCTTATCCACGCATCCATTTTATGCTTTCATCCTATGCTCCTGTGATATCTGCTGCAAAGGCCTACCATGAGCAACTATCAGTGCCTGAGATCACCAGAGCTGTGTTTGAGCCATCAAGCATGATGGTAAAGTGTGATCCAAGACATGGCAAATACATGGCATGCTGCCTCATGTATCGTGGAGATGTTGTGCCAAAAGATGTCAACCATGCTGTCTCAAGTATCAAGACAAAGAGACAAGTTCAGTTTGTAGACTGGTGCCCTACTGGTTTCAAGTGTGGTATCAACTACCAAGCTCCAACAGTGGTACCAGAAGGTGATCTTGCCAAAGTGGATAGAGCAGTTTGCATGATAAGCAACAACACAGCTGTGGCTGAAGTTTTCTCTCGCATTGACCACAAATTTGACCTCATGTTTGCCAAAAGGGCCTTTGTGCATTGGTATGTGAGTGAAGGCATGGAAGAAGGTGAATTCTCAGAAGCCAGAGAGGATCTTGCAGCTCTTGAAAAGGACTATGATGAAGTTGGTGATGAAGGTGTGGATGATGAAGATGTTTAAACTTATTGAAACTTAATCCTCCTTCACTAGCTACCTACATCTCCTATGTTTTTTGTCTTGCCACGTAGTATTGTTCTTGTCCATTTTCTTATGCTTCTTTTTGTTGTATGGTGTGACTGTCATCTTATGGTTGTTTTGAATTGAAGTGTTAAGAGAATTGTTTAATTCATGTAGAATGGTAGTGTAATTGATTGTCCTTTTG 1531 0.4102 NMREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDDVHDAFNTFFSEIGTGQYVPRALFVDLEPSVIDEVRCGPYKQLFHPEQLMSGKEDAANNFARGHYTVGKEMEELCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFIIYPSPQVSTAVVEPYNTVLSNHALIEHSDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDISEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITRAVFEPSSMMVKCDPRHGKYMACCLMYRGDVVPKDVNHAVSSIKTKRQVQFVDWCPTGFKCGINYQAPTVVPEGDLAKVDRAVCMISNNTAVAEVFSRIDHKFDLMFAKRAFVHWYVSEGMEEGEFSEAREDLAALEKDYDEVGDEGVDDEDV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00862 442 PRINTS Alpha-tubulin signature 85 98 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 419 435 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 145 157 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 318 339 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 42 55 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 117 125 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 211 223 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 158 169 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 382 398 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 271 286 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 357 376 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 19 34 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Alpha-tubulin signature 344 357 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 Pfam Tubulin/FtsZ family, GTPase domain 4 210 IPR003008 GO:0005525
Pste9g00862 442 Gene3D Helix hairpin bin 381 433 IPR023123 -
Pste9g00862 442 FunFam Tubulin alpha chain 2 265 - -
Pste9g00862 442 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 139 145 IPR017975 GO:0005525|GO:0005874|GO:0007017
Pste9g00862 442 SMART Tubulin_C_4 245 390 IPR018316 -
Pste9g00862 442 Coils Coil 415 435 - -
Pste9g00862 442 FunFam Tubulin alpha chain 266 380 - -
Pste9g00862 442 Gene3D Tubulin/FtsZ, GTPase domain 2 265 IPR036525 -
Pste9g00862 442 SUPERFAMILY Tubulin C-terminal domain-like 243 434 IPR008280 -
Pste9g00862 442 Gene3D - 266 380 IPR037103 -
Pste9g00862 442 SMART Tubulin_4 46 243 IPR003008 GO:0005525
Pste9g00862 442 PRINTS Tubulin signature 92 103 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 175 188 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 50 69 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 11 31 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 189 209 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 105 129 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 131 149 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 377 405 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 PRINTS Tubulin signature 150 171 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 Pfam Tubulin C-terminal domain 260 389 IPR018316 -
Pste9g00862 442 PANTHER TUBULIN 3 433 IPR000217 GO:0005874|GO:0007017
Pste9g00862 442 SUPERFAMILY Tubulin nucleotide-binding domain-like 2 241 IPR036525 -
Pste9g00862 442 CDD alpha_tubulin 3 432 - -
Pste9g00862 442 FunFam Tubulin alpha chain 381 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00862 Pste-Chr9 4576833 4581738 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01863 5 11767049 11770414 Pste9g00862 9 4576833 4581738 PCT