Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00805 GTCCCTTTTCTGAGCTTTGACCACGACAAGAACCAAAGCCTCTCACTCCTCCTCACATCACAACACAACACAACTCAAGAAAGTTCCTATTTCCCACCACTTTCTCTCTTTCATCTCTTCAAAGCCTCCAAAAGCTGCAACCTTTCTTTGTTTTTTCCTCACTCTCCCTTGAATCTTCCAACTCTTCTAGCCCCTTTCAGCAGTTTTCCATTCTGGGTCTCTTTTCAATCACTCCAAAGTGGAACTTGAAGCACTGTTTTTCTGTTTATAGTTAGTAGTGGCTTTTTCAAAAGGAAGTTCAAAGTTCTAATGGCTATTCTGCTAATCTTTTACTTGCTTTGTGCCATAGCTTTGCCTGCTTATGGAGATGCTTTCATTGGTGTCAACATTGGTACAGATATCACCAACATGCCAAGTCCAACAGAAACTGTAGCTCTTCTTAAGGCTCAAGGTATCCAACATGTTAGACTCTATGATGCAGACAGAGCCATGCTTCGCGCCCTTGCCAACACAGGAATCCGTGTAATGATTTCTGTTCCTAATGACCAGATTCTTGGCATTGGTCAGTCCAATGCCACAGCCGCGAATTGGGTTGCACGCAATGTCATAGCTCATGTTCCTGCTACTAACATTACTGCCATAGCTGTTGGATCTGAAATCCTAACTTCCCTCCCAAATGCAGCTCCTATCCTAGTCTCAGCACTAAATTTCATTCAAGCTGCGCTAGTTGCAGCCAATCTTGACCAACAAGTCAAAGTCTCTACTCCACATTCTTCTTCTATCATCCTTGACTCTTTCCCACCTTCTCAAGCATTTTTCAATAAAACTTGGGATCCTGTCATGGTTCCGTTGCTTAAATTTCTGCAATCAACAGGTTCATATCTTATGCTCAATGTGTACCCTTATTATGATTACATGCTAAACGATGACTCAATCCCTCTAGACTATGCTTTGTTCCGGCCCTTACCCCCAAATAAGGAAGCTATTGATTCCAACACCCTCTTGCATTATACTAATGTCTTTGATGCAGTTGTTGATGCTGCTTATTTTGCAATGTCATATTTGAATTTTACCAATATTCCTATTGTGGTCACTGAGTCAGGATGGCCCTCCAAGGGTGATTCATCTGAGCCAGATGCAACTATTGATAATGCTAACACTTACAATAGTAACTTGATCAAGCATGTCCTTAACAATAGTGGGACTCCTAAGCAACCTAGAATTGGAATTAGCACTTATATTTATGAGCTTTATAATGAAGACATGAGACCAGGTCCAGTGTCTGAGACTAATTGGGGCTGTTTTATGCTAATGGAGCTCCAGTGCTGCTTTAGATTGGGCTTGTGGACTGGGAAGGTGAATTGTTCACCTTTGCTCCAGGGTCAACCATGTTATGAACCAAATAGTGTTGTTGCACATGCTACATATGCTATCAATGCATATTATCAGCAAATGGATAAGGCTGCTGGAACCTGTGATTTCAAGGGAGTTGCCTCTGTCACCACCACAAACCCAAGTCACGGTTCCTGTATATTTCCAGGAAGGGTGCTTGTCACAATATTACAATGGTGGATCTTTAAGAAGCTTTGTGATTCTTACTTTAGTTTTGAGTGTAGTGGTCCTGCAAAACTAAGATTGGAATATGTTAAGCATTGGAATCTATTTAATGGTGACACACTAAGATTGCTGCATGCCCAATTTTGTGTTCCTCATTCAGAGAGGATTTAA 1728 0.4144 MAILLIFYLLCAIALPAYGDAFIGVNIGTDITNMPSPTETVALLKAQGIQHVRLYDADRAMLRALANTGIRVMISVPNDQILGIGQSNATAANWVARNVIAHVPATNITAIAVGSEILTSLPNAAPILVSALNFIQAALVAANLDQQVKVSTPHSSSIILDSFPPSQAFFNKTWDPVMVPLLKFLQSTGSYLMLNVYPYYDYMLNDDSIPLDYALFRPLPPNKEAIDSNTLLHYTNVFDAVVDAAYFAMSYLNFTNIPIVVTESGWPSKGDSSEPDATIDNANTYNSNLIKHVLNNSGTPKQPRIGISTYIYELYNEDMRPGPVSETNWGCFMLMELQCCFRLGLWTGKVNCSPLLQGQPCYEPNSVVAHATYAINAYYQQMDKAAGTCDFKGVASVTTTNPSHGSCIFPGRVLVTILQWWIFKKLCDSYFSFECSGPAKLRLEYVKHWNLFNGDTLRLLHAQFCVPHSERI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00805 472 Pfam X8 domain 347 395 IPR012946 -
Pste9g00805 472 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Pste9g00805 472 FunFam Glucan endo-1,3-beta-glucosidase 3 22 347 - -
Pste9g00805 472 SMART X8_cls 337 409 IPR012946 -
Pste9g00805 472 Gene3D Glycosidases 22 335 - -
Pste9g00805 472 SUPERFAMILY (Trans)glycosidases 23 332 IPR017853 -
Pste9g00805 472 Gene3D - 336 409 - -
Pste9g00805 472 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 398 IPR044965 GO:0004553|GO:0005975
Pste9g00805 472 Pfam Glycosyl hydrolases family 17 23 332 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00805 Pste-Chr9 4177577 4183790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00805 20 403 Glycoside Hydrolase AT2G01630 68.735 0.0 587
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00805 9 4177577 4183790 Pste9g00805 9 4177577 4183790 ECH