Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00459 CACCCTTTTGCATTAAGGGCAATTCTTAGTACTATTAATGCCATATATAGCTTCATCACCTACACCAACAATGCTGAACCATTTCAAAATGAACAACAACATTTTGTTCACATTGCTTTTGGTGATCATCACCACAGCATGTTTCTATGTTCCTGAATGGAAGCCTAGTCCTTCAATTATGGTAACATTTTGCATGGTCATGACCCTATTGTACCATTACCTTATTAACAAACCAAACAAAATTTACTTGGTGGATTATGCATGCTTCAAACCAAGCAAAGAATGTCTATGTTCCAAGGAAACATTGCTTGACAGAGCCAAGCATGTGGGGTTTCTCTCAGATGAGAACTACAAGCTTGTGACAAAGATTCTAGATAGGTCAGGGTTGGGGCCATGGACCTATGTGCCTGAAGGGTTGTTGGAGATTCCACCAAGGCTCACACTTGATGAGGCTAGGAAGGAAACTGACACTGTTCTTTTTGGTGCTGTTGATGAGTTGCTTCACAAAACTGGGGTTGAGGCTAAGGACATTGGGATTCTTGTGGTGAATTGTTGCTTGTTTAACCCTACTCCTTCTTTGTCTGACTCCATTGTGAATAGGTACAAGTTAAGAGGGAACATTTTGGCTTATAATCTTAGTGGCATGGGGTGCAGTGCAGGTGTTCTTGCTGTTGACTTTGCCAAACAGCTCCTTCAGGCACACCCCAACTCGTATGCCCTTGTCCTCAGCACCGAGAACGAAATCTCCAGCATGTATTGGGGCAACAACCCCTCCATGCTCCTCGTCAACTGCCTCTTCCGCATGGGTGGCTCCGCCGCCCTCCTTTCCAGCCACCCCTCCGACCGGTGCCGCTCCAAGTATGAACTCTTCCACACCCTCCGCACCCACGTTGGCGCTGATGACAACAGCTACAAATGTGTCTTTCAGGTCCACATAACCTCTCTGGGGCCAGTGGTTCTTCCACTCTCAGAAAAACTAAAATTTGTGGTTAACCTAATTGAGAGAAGGGTCTTGAAGACGAAGTTGGAGTCATACATGCCAAACTTCACACTAGCGTTTAAGCATTTCTGCATCCACACAGGAGGAAGAGCAGTGCTAGATAGAATGCAGAAAAGTTTGGGCTTGGAGGATTGGTACATGGAGCCTTCAAGAATGACGTTGTATCGGTTCGGGAACACGTCCTCAAGCTCAGTGTGGTACGAGCTGGCTTACTGTGAGGCCAAAGGGAGGATCAAGAAGGGTGATAGGGTGTGGCAGATGGCTTTTGGGTCTGGGTTTAAGTGCAACACAGCAGTGTGGGTTGCTTTGAGGAGTATTGAGGGTGGGGCTGGTACTATCAGCCCTTGGAGGGATGAGATTCATAATTTT 1369 0.4646 MPYIASSPTPTMLNHFKMNNNILFTLLLVIITTACFYVPEWKPSPSIMVTFCMVMTLLYHYLINKPNKIYLVDYACFKPSKECLCSKETLLDRAKHVGFLSDENYKLVTKILDRSGLGPWTYVPEGLLEIPPRLTLDEARKETDTVLFGAVDELLHKTGVEAKDIGILVVNCCLFNPTPSLSDSIVNRYKLRGNILAYNLSGMGCSAGVLAVDFAKQLLQAHPNSYALVLSTENEISSMYWGNNPSMLLVNCLFRMGGSAALLSSHPSDRCRSKYELFHTLRTHVGADDNSYKCVFQVHITSLGPVVLPLSEKLKFVVNLIERRVLKTKLESYMPNFTLAFKHFCIHTGGRAVLDRMQKSLGLEDWYMEPSRMTLYRFGNTSSSSVWYELAYCEAKGRIKKGDRVWQMAFGSGFKCNTAVWVALRSIEGGAGTISPWRDEIHNF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00459 444 CDD CHS_like 70 421 - -
Pste9g00459 444 SUPERFAMILY Thiolase-like 254 422 IPR016039 GO:0016746
Pste9g00459 444 Gene3D - 122 422 IPR016039 GO:0016746
Pste9g00459 444 PIRSF Very_long_ch_3-ktacl-CoA_syn 7 299 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste9g00459 444 PIRSF Very_long_ch_3-ktacl-CoA_syn 296 444 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste9g00459 444 Pfam FAE1/Type III polyketide synthase-like protein 62 297 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pste9g00459 444 PANTHER 3-KETOACYL-COA SYNTHASE 47 297 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste9g00459 444 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 342 421 IPR013747 -
Pste9g00459 444 SUPERFAMILY Thiolase-like 53 272 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00459 Pste-Chr9 2293085 2301177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00459 44 444 Miscellaneous Gene Families AT1G04220 56.481 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00459 9 2293085 2301177 Pste9g00459 9 2293085 2301177 ECH