Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02119 ATGCTTCCCCGTTTCTCCCACCTTCTCCGCCACCCTCCGCCACTCCACGCCATGGCGCGTGCCGTCACGTGCGCGACTCACCCCTCTCATTTCCACCTCCCACCGGACATCACCGCCCGCCACATGTCCCTGCCTTCCAAATCTTCCCTTTTCGGTCGCACCTTTCACGCACTCGCGCGGTGCCTCAGTGAAGGGGCGCGGCGCGTGGTTGGAGTACGCTCCGAACAGAGGGAGTACCGGAAAACCAGGAGAAGAGCGCCCAAAAAGAAAGAGAGGGAGTTGCAACTCTGCGTGGAGATTTGCGTAGAGGAAGATTTGCCTGATGATCCTGAAATTTTGAGCATTGCCGAGTTGCTTCGACTTAATGTACCAATGGCAATGAAATTGGCGTTTGATGGTTTGAAAGATTCACGGTATAAAACACGGGACACTGCTATAAGTGATGTTGGTGGCTTTGATAGTGTTGAGTTATCAGTACTTCTTTGCAACGATGAGTTTATTCGAAAACTTAATAAGGAATGGAGAGATGAAGATCATGCCACAGATGTTCTCTCAATGTCACAACATGTGCCTGGGCTCAATCTTCCTATTCTTATGTTGGGTGATATTGTTATTTCTGTCGAGACAGCAGCAAGACAAGCAGAGGAAAGAGGGCACACTCTTCTTGATGAGATCCGAATCCTCATGGTTGAATATCAATTACTCTGTTTGCAGGTTCATGGCTTGTTACATCTTTTGGGATTTGACCATGAAATAAGTGAAGAGGCTGAAGTAGAAATGGAAAGAGAGGAAGAAATCCTTTTAAAAAGTCTTGATTGGAAAGGAAAAGGGCTAATAAAGAGTGCCTGTGATGCTGAAACAAATTCAAATTTTCACCAAGACAGTTTGGATGGAAGAAAGAAGGCAGTCTTAGATTTTACAAACCAAAGTTCAGCTATATCTTCTGTGATATGGATGACTCCTGTATTGTATAAAGGAACATTGCTGAACAGCAAAAGTCAACTTTCTTCTGCAACTGTCAATGCTTTGAGGGAGGCATCATCAAGGGGTGTGAAAATTGTGATAGCTACCGGAAAAGCTCGTCCAGCTGTAATAGACATTTTTAAGATGGTAGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTTCTTACAGGGATTGCTTGTTTATGGTAGGCAAGGTCGGGAAATCTTTAGGAGCAACTTAGATCCAAAAGTCTGTAGAGAGGCATGCATTTACTCTTTGGAGCGTGAGGTTCCACTTATTGCATTTTGTGAAGGTCGCTGCTTAACCCTATTTCATGATCCTCTTGTTAATTCACTGCATACAATATATCATGAGCCAAAGGCTGAGGTCATGCCTTCTGTTGAACATCTATTGGCTTCTGCTGATGTACAG 1413 0.4459 MLPRFSHLLRHPPPLHAMARAVTCATHPSHFHLPPDITARHMSLPSKSSLFGRTFHALARCLSEGARRVVGVRSEQREYRKTRRRAPKKKERELQLCVEICVEEDLPDDPEILSIAELLRLNVPMAMKLAFDGLKDSRYKTRDTAISDVGGFDSVELSVLLCNDEFIRKLNKEWRDEDHATDVLSMSQHVPGLNLPILMLGDIVISVETAARQAEERGHTLLDEIRILMVEYQLLCLQVHGLLHLLGFDHEISEEAEVEMEREEEILLKSLDWKGKGLIKSACDAETNSNFHQDSLDGRKKAVLDFTNQSSAISSVIWMTPVLYKGTLLNSKSQLSSATVNALREASSRGVKIVIATGKARPAVIDIFKMVDLAGKDGIVSEFSPGVFLQGLLVYGRQGREIFRSNLDPKVCREACIYSLEREVPLIAFCEGRCLTLFHDPLVNSLHTIYHEPKAEVMPSVEHLLASADVQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02119 471 SUPERFAMILY HAD-like 326 465 IPR036412 -
Pste8g02119 471 NCBIfam rRNA maturation RNase YbeY 144 270 IPR002036 GO:0004222|GO:0006364
Pste8g02119 471 ProSitePatterns Uncharacterized protein family UPF0054 signature. 240 250 IPR020549 -
Pste8g02119 471 Pfam Endoribonuclease YbeY 151 270 IPR002036 GO:0004222|GO:0006364
Pste8g02119 471 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 146 275 - -
Pste8g02119 471 Hamap Endoribonuclease YbeY [ybeY]. 97 280 IPR002036 GO:0004222|GO:0006364
Pste8g02119 471 Gene3D Metalloproteases ("zincins"), catalytic domain 125 273 IPR023091 GO:0004222
Pste8g02119 471 Pfam haloacid dehalogenase-like hydrolase 326 433 - -
Pste8g02119 471 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 93 471 IPR002036 GO:0004222|GO:0006364
Pste8g02119 471 Gene3D - 324 424 IPR023214 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02119 8 18478563 18484219 Pste8g02119 8 18478563 18484219 ECH