Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02114 CGTGATTTCACTCAAAACTTGGTTCTTCAATTGGGTCTATCATCTATTATCATATTCTTATCTGATTATGTTCATATTTTCTCTCATACGAACAAAACAAAACCCGTTATTTCAAATGATTCACCGTTCTGCGAGTGTTGATACTTGACGGAACGAATTGAAAGCGGATCTCAATGGACAACACCAAACCTCTTATCGAACCCGAACCCGAACCCGAACCCGACGATGATGGAAGAATCCGAAGAACCGGGAATGTGTTGACTGCTAGCACACACATTATAACAGTGGTGGTAGGGGCAGGGGTGCTTGCTCTGGCATGGGCCATGGCCCAACTAGGATGGATAGCAGGCATAGCCAGCATTCTCACCTTTTCTTCTGTCTCCATTTTCACTTATAGTGGAACAATGCATCTGCTTTGTGGATTGATTCAATATACCAAGCTTGCTGGGATCACAGTGGGCTACACAATAACTTCCTCCACAAGCTTGGTTGCAATAAGGAAAGCAATTTGCTACCACAAAACAGGAAAAGAAGCTTCCTGCAAGTTTTCAAATAATCCCTTCATGATTGGTTTTGGGATCTTGCAAATTTTCTTGTCTCAAATCCCAAACTTTCATGAGCTTACATGGCTCTCAACTGTTGCTGCTATCACCTCATTTGGTTATGTATTCATTGGTAGTGGGCTATGTCTATCGGTCATCCTTTCAGGGAAAGGAGCATCAACCAGCATAACCGGGACCGCACTACCTCCAGCAGATAAACTTTTGAGGGTTTTCACTGCAATGGGAAACATAGCACTTGCATGCACTTATGCTACTGTTGTTTATGATATAATGGACACATTAAAGTCACATCCACCAGAGAATAAACAAATGAAAAGGGCAAATGTGCTGGGAGTGACAGCAATGACAATATTGTTCTTGCTATGTAGTGCCCTTGGCTATGCTGCTTTTGGTGACAACACACCTGGGAACATCTTGACTGGATTTACTGAACCCTTCTGGTTGGTTGCACTGGGGAATGGATGCATTGTAATCCACATGATTGGAGCATATCAGGTGATGGGTCAACCTTTCTTTCGTATAGTTGAAATGGGTGCTAACATGGTGTGGCCACAATCAGATTTCATCAACAAGGAATATGCATTCATGATGGGCAATGTAATGCTCCGTTTCAACTCGTTTAGGTTAGTTTGGAGGACCATTTTTGTGATATTGGCAACAATTCTTGCAATGTTAATGCCATTTTTCAGTGAGGTTCTTTCCCTTCTTGGAGCAATTGGGTTTGGTCCTCTAGTTGTGTTTTTCCCAATACAAATGCACATTGCCCAAAGAAATATTAAGAAACTATCACTTAGATGGTGTGGCCTTCAACTTTTAAGTAGCTTGAGCTTTGTTGTTTCACTAGCTGCTGTGGTTGGTTCAGTTCAAGGAATCATTAAGGATTTCCAGAAAACCAACCTTTTCATATGCGTAGATAATAGGACAATATGGACTGCAAGTGCACATATAATAACAGCAGTTGTTGGAGCTGGGGTACTTTCTTTGGCTTGGGCCCTGGCCCAATTGGGATGGATCATAGGTGTATCTGCTATAATTCTATTTGCCAGTGTCACACTCTACACTTCCAATCTTTTAGCTGATTGTTATAGATCACCAGACCCTGTCACTGGTAAGAGAAATCACACTTACATGGAGACTGTGAAAACCAACTTAGGTGGTAAAATGCATATGATTTGTGGATTGGTCCAATATGGCAATCTTAGTGGGGCAGCAATTGGATACACAATAACCACATCCATAAGTGTAGTGTCAATACAAAAAGTCAACTGCTTCCATAAAAATGGAGTTGAAGCTTCATGCAAATTTTCTAATAATCCATACATGATTGGTTTTGGCATTGTAGAAATATTTTTGTCTCAAATCCCCAATTTCCATAAGTTATCTTGGTTGTCAATCATAGCAGCAATTATGTCTTTTGGTTATGCATTTATTGGAGCTGGGCTTTCTATTGCTACTAAAATTGAAGGAGGAGGAAGAAGTACCTATTTATTTGGGGGAAGCAAGGAACAAAACTCTGTAGATAAATTGTGGAATATGTTTATGGCACTGGGAAATATTGCACTTGCCAGCACATATACTCAAATTGCAATAGATATTCAGGACTCTTTAAAGTCATCGCCACCAGAAAATAAAGTGATGAAGATGGCAAACAAGATAGGAATTTCGACAATGACATTTATCTTTCTCTTATCTGCCTGCTCTGGCTATGCTGCATTTGGCTCAAATACTCCAGGCAGCATCTTAATGAGCTATGGATTTAAAGAACCATTTTGGCTTGTTGATTTGGCCAATGGCTTCATCATTGTACTTACACAACCAATTTTTGGTGCGGTAGAAACTTTGGTTAGGCAAAAATGGCCAGAATCAAGTTTTGTTACAAAGGAGTACCCAATAAACATTGGAAAAATGATTTTTAACTTCAATTTCTTTAGGCTTGTTTGGAGGACCATATTTGTGATGGTGGCAACCATTTTGGCTATGGCAATGCCCTTTTTCAATGAAATGCTTGCTCTTCTTGGGGCTATGGCATTTTGGCCCTTGGTGATTTATTTTCCAGTGGAGATGTTCATTGCAAAACAGAAGATCAAGAAACTAACAATTAAATGGTTTGGACTTCAAACATTGAACTTTGTTTTTATGTTAGTGTCTATAGTTGTAGCATGTGCAGCCATTCATGGCTTGAATCAAGCTCTTCGTAAGTACAAGCCCTTTATGTATAGAATAAAATAA 2792 0.3979 MDNTKPLIEPEPEPEPDDDGRIRRTGNVLTASTHIITVVVGAGVLALAWAMAQLGWIAGIASILTFSSVSIFTYSGTMHLLCGLIQYTKLAGITVGYTITSSTSLVAIRKAICYHKTGKEASCKFSNNPFMIGFGILQIFLSQIPNFHELTWLSTVAAITSFGYVFIGSGLCLSVILSGKGASTSITGTALPPADKLLRVFTAMGNIALACTYATVVYDIMDTLKSHPPENKQMKRANVLGVTAMTILFLLCSALGYAAFGDNTPGNILTGFTEPFWLVALGNGCIVIHMIGAYQVMGQPFFRIVEMGANMVWPQSDFINKEYAFMMGNVMLRFNSFRLVWRTIFVILATILAMLMPFFSEVLSLLGAIGFGPLVVFFPIQMHIAQRNIKKLSLRWCGLQLLSSLSFVVSLAAVVGSVQGIIKDFQKTNLFICVDNRTIWTASAHIITAVVGAGVLSLAWALAQLGWIIGVSAIILFASVTLYTSNLLADCYRSPDPVTGKRNHTYMETVKTNLGGKMHMICGLVQYGNLSGAAIGYTITTSISVVSIQKVNCFHKNGVEASCKFSNNPYMIGFGIVEIFLSQIPNFHKLSWLSIIAAIMSFGYAFIGAGLSIATKIEGGGRSTYLFGGSKEQNSVDKLWNMFMALGNIALASTYTQIAIDIQDSLKSSPPENKVMKMANKIGISTMTFIFLLSACSGYAAFGSNTPGSILMSYGFKEPFWLVDLANGFIIVLTQPIFGAVETLVRQKWPESSFVTKEYPINIGKMIFNFNFFRLVWRTIFVMVATILAMAMPFFNEMLALLGAMAFWPLVIYFPVEMFIAKQKIKKLTIKWFGLQTLNFVFMLVSIVVACAAIHGLNQALRKYKPFMYRIK 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02114 872 MobiDBLite consensus disorder prediction 1 23 - -
Pste8g02114 872 Pfam Transmembrane amino acid transporter protein 73 422 IPR013057 -
Pste8g02114 872 Pfam Transmembrane amino acid transporter protein 437 853 IPR013057 -
Pste8g02114 872 PANTHER OS05G0424000 PROTEIN-RELATED 439 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02114 Pste-Chr8 18340371 18382274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02114 441 867 Organic Solute Cotransporters AT1G58360 53.182 2.99e-164 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02114 8 18340371 18382274 Pste8g02114 8 18340371 18382274 ECH
Pste2g02287 2 22989697 23009929 Pste8g02114 8 18340371 18382274 PCT