Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02048 CAAAAATACAACACATGTACACAGTAAGTCCCATAACCAAAACCATGCATACACGAACCTGCCAATTAATCACCCCTCAAATCCTTCCATTCCAACGGGCTTCCACGCCCCACCGTCACCGCCACCTCCTGCCACCACCCTCAGCCTCTGTCTCCGCCACGGCACCCCTCAAGGCACCCCTCAAAGCCCGCAAAACCCACTCACTCCCCGCTGAAAAACAAGAAATTTTCAAATTGATGGAGCCGTGGGCCTCGGAGTGGGTCCTACCACTCCTAAAGCCCGTGGACCAATGCTGGCAGCCGCAGACCTTCCTCCCAGACTCCAGCCTCCCATTCAAGGAGTTCAGCGATCAGGTAAAAGCGCTTCGCGAACGCACAAAGGAGCTTCCCGATGAGTACTTCGTGGTGCTTGTGGGGGACATGGTCACTGAAGATGCGCTTCCCACTTACCAGACCATGATTAACAATCTCGATGGAGTTAAGGATGACTGCGGCACGAGCCCAAGCCCATGGGCCGTGTGGACCCGGGCCTGGACCGCCGAGGAGAACAGACATGGTGATTTGCTCAGGACTTATTTGTACCTTTCCGGTCGGGTTGACATGGCCAAGGTTGAAAAGACTGTTCATTACCTCATTGGTGCTGGCATGGACCCTGGAACAGAGAACAATCCTTATTTGGGGTTTGTGTACACGTCATTCCAAGAGCGAGCCACGTTTGTGGCTCACGGCAACACGGCTCGGCTCGCTAAGGAGGGTGGTGATCCAGTGCTGGCGCGTCTATGCGGGACCATTGCAGCTGACGAGAAGCGTCATGAGAATGCGTACTCTAGAATCGTGGAGAAGCTTCTGGAAGTGGACCCCACTGGAGCGATGATGGCCATAGGGGACATGATGGAGAAGAAGATCACCATGCCGGCGCACCTTATGTACGATGGGGAGGACCCCAGGCTATTCGAGCATTACTCCGCTGTGGCGCAGCGCATGGGGGTGTACACTGCCGATGACTACGCAGACATCTTGGAGTTTCTCGTTCGACGGTGGAGATTGGAGAAGATTGAGGGTTTAACGGGCGAGGGAAAGCGAGCGCAGGATTACGTGTGCGCGTTAGCGCCGAGGATTAGGAAACTGCAGGAGCGTGCTGATGAGAGAGCGCGTAAGATGAAGAAGCCTCACAGCGTCAAGTTTAGTTGGATCTTCAATAAGGAACTTGTTTTGTGAAATTTAAGTTTAAAACAGTGAAGTGACATA 1247 0.5373 MYTVSPITKTMHTRTCQLITPQILPFQRASTPHRHRHLLPPPSASVSATAPLKAPLKARKTHSLPAEKQEIFKLMEPWASEWVLPLLKPVDQCWQPQTFLPDSSLPFKEFSDQVKALRERTKELPDEYFVVLVGDMVTEDALPTYQTMINNLDGVKDDCGTSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMAKVEKTVHYLIGAGMDPGTENNPYLGFVYTSFQERATFVAHGNTARLAKEGGDPVLARLCGTIAADEKRHENAYSRIVEKLLEVDPTGAMMAIGDMMEKKITMPAHLMYDGEDPRLFEHYSAVAQRMGVYTADDYADILEFLVRRWRLEKIEGLTGEGKRAQDYVCALAPRIRKLQERADERARKMKKPHSVKFSWIFNKELVL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02048 400 PIRSF Dlt9_acylACP_des 27 400 IPR005067 GO:0006631|GO:0045300
Pste8g02048 400 Gene3D Ribonucleotide Reductase, subunit A 52 400 IPR012348 GO:0016491
Pste8g02048 400 CDD Acyl_ACP_Desat 67 375 IPR005067 GO:0006631|GO:0045300
Pste8g02048 400 SUPERFAMILY Ferritin-like 56 399 IPR009078 -
Pste8g02048 400 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 53 398 IPR005067 GO:0006631|GO:0045300
Pste8g02048 400 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 52 400 - -
Pste8g02048 400 Pfam Fatty acid desaturase 67 394 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02048 Pste-Chr8 16725476 16727828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02048 38 398 Acyl Lipid Metabolism Gene Families AT1G43800 74.531 0.0 584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02048 8 16725476 16727828 Pste8g02048 8 16725476 16727828 ECH