Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02033 TGCGAATACACCGACAACCGAAACATCAAAGGGGTTTTCTTTGACCATCCGCAACCTTCTACTAATCCCTCTTTCCCTTCAAAATCTTTTTCCTTTTCCTTCTTCTTCCACTTTCCACCGAAGTCAAGTCTAGAATTTCCAACGAACACAACAAAAGAAAAATAGAACAAAACCTCTTCTTAGATCCAATCCAATATAATACATTGATACCTATCTATCAAGTCAAGACCAAAGTCCAAGCTTGGTTTGTTGAATTTCTCATTTGGGGTTCCCAATGGATGCTTCGTCCTCGAGTCAACCTGAATTCGATTATTTGTTCAAGCTTCTCTTGATTGGGGATTCTGGGGTTGGCAAAAGCACCCTGCTTTTGAGCTTCACCTCTGATACTTTTGAGGATCTTTCTCCCACCATTGGTGTAGATTTCAAAGTTAAATATGTTACAATTGGAGGAAAAAAGTTAAAACTTGCAATTTGGGACACAGCTGGACAGGAAAGGTTCAGAACACTGACTAGTTCATATTATAGAGGAGCTCAAGGAATAATAATGGCATGGGCACATGGCTTATATGATGTAACAAGGCGGGAAACCTTTACTAATCTATCTGATATTTGGGCTAAAGAAATTGACCTATACTCAACAAATCAAGATTGCATCAAGATGCTTGTAGGAAACAAGGTTGATAAGGAAAGTGAAAGGGTTGTCAGCAAAAAGGAAGGGATAGACTTTGCAAGGGAATCTGGATGTCTGTTTACTGAATGCAGTGCAAAAACCAGAGTCAATGTTGCACATTGTTTTGATGAGCTTGTGATGAAGATTTTGGAGACACCAAGTCTATTGGCTGAGGGCTCATCTGGTGTGAAAAAGAACATCTTCAAACAGAAAGCCCCCCAGTCTGATGCATCAAACAGTGGCTGCTGTTCATGGTGATTTACATGTTTAATGGGATTTCACCTTCCACTTCTCGGTATGATCTTCATTCCAAGTGGAATTAAATTTCTTTACATGTACCAACCAAGAAAATATTTTTATTCCAGCTTGTATATTTAGATTAAATTTAAATTATTATTCTTCTCAATAATTTGCCTAATGTTTAAATATATCCATTTTATTCTAGCCTTTGTATTTATTTATGCTTTGATATTTTAACTTGATCATATGTGTGATTCACGTAATAGAGGG 1180 0.372 MDASSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAWAHGLYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEGIDFARESGCLFTECSAKTRVNVAHCFDELVMKILETPSLLAEGSSGVKKNIFKQKAPQSDASNSGCCSW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02033 217 Gene3D - 8 215 IPR027417 -
Pste8g02033 217 PRINTS Transforming protein P21 ras signature 15 36 - -
Pste8g02033 217 PRINTS Transforming protein P21 ras signature 37 53 - -
Pste8g02033 217 PRINTS Transforming protein P21 ras signature 124 137 - -
Pste8g02033 217 PRINTS Transforming protein P21 ras signature 159 181 - -
Pste8g02033 217 PRINTS Transforming protein P21 ras signature 55 77 - -
Pste8g02033 217 ProSiteProfiles small GTPase Rab1 family profile. 10 215 - -
Pste8g02033 217 SMART ran_sub_2 20 212 - -
Pste8g02033 217 SMART rho_sub_3 17 184 IPR001806 GO:0003924|GO:0005525
Pste8g02033 217 SMART rab_sub_5 15 184 - -
Pste8g02033 217 ProSiteProfiles small GTPase Ras family profile. 7 217 IPR001806 GO:0003924|GO:0005525
Pste8g02033 217 CDD Rab18 15 181 - -
Pste8g02033 217 PANTHER RAS-RELATED PROTEIN RAB 14 196 - -
Pste8g02033 217 NCBIfam small GTP-binding protein domain 13 176 IPR005225 GO:0005525
Pste8g02033 217 Pfam Ras family 16 182 IPR001806 GO:0003924|GO:0005525
Pste8g02033 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 193 IPR027417 -
Pste8g02033 217 SMART ras_sub_4 12 184 - -
Pste8g02033 217 FunFam Ras-related protein RABC1 8 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02033 Pste-Chr8 16507733 16513454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g02033 16 117 EF-hand Containing Proteins AT5G27540 24.510 7.74e-08 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02033 8 16507733 16513454 Pste8g02033 8 16507733 16513454 ECH