Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g02025 ATTTCCCAATCCCGAAGCTGCGGCTTCGTCATTTTTGCTTCAGATATTCCCATCACTTCTTATTCCTATTTCATTTTCAATTCAATTCCACGGTTTTTTCATCTCATAATAATTTCAGAAGATTTGAATTACAATTGAGGATTTGAGTGAAGAGCGAGGGAGAGAGAAATGGCTAACGATGCAGCAGCCTGTGCTGAGAGGGCAACCAGTGACATGCTAATTGGTCCGGATTGGGCAGTTAACATTGAGTTGTGTGATATTATCAATATGGATCCTTGGCAAGCAAAGGATGCAATAAAGATACTTAAGAAGCGTTTGAGCAATAAAAATCACAAAATACAACTTCTGGCTCTTGTTGCCCTGGAAACCCTTAGTAAAAATTGTGGTGACAGTGTATTTCAACAGATCATTGAGCGGGATATCTTACATGACATGGTTAAAATAGTGAAGAAGAAGCCAGACTTAAGTGTAAAGGAAAAGATATTGATTGTGATTGATACATGGCAAGAAGCTTTTGGTGGACCAAGTGGAAGGTATCCCCAGTACCATGCAGCATATAATGAATTAAAGTCTGCTGGAGTTGAATTTCCCCCACGAGAAGAGAATAGTGTTCCTTTCTTCACTCCTCCTCAAAACCGGTCAGTTCATCATGCTGCTGCAGAATATGAGGCTGCTGCTATTCAGGCTTCTCTTCAGTCTGACGCATCCGGCCTTAGTTTGCCAGAGATCCAGAATGCTCAAGGATTAGCAGATGTATTGACTGAAATGCTCAATGCCTTGGATCCTAAAAATCCTGAGGTTGTGATGCAGGAGTTGATTGTTGACCTTGTTGACCAGTGCCGTTCATACCAAAAGCGTGTTATGCTTCTTGTAAATGAGACTACGGATGAGCAGCTTTTGGGTCAGGGATTGGCACTGAATGACTGTCTTCAAAGAGTGCTTTGTCAACATGACAATATTGTAAAAGGAACTCCTGATACAGGCAAAAGAGGCACAGAAACATCAATTCTGCCAGTTGTAAATGTAAACAACGATGAGGATGAGTCAGATGATGATTTTGCTCAACTAGCTCATAGGTCATCACGAAACACAAATGCACAGAAACAGAAACCAGCCTTTGACAAGGCAGAACCGGTGAGAGTAAGCCCATTTCTTCCACCTCCACCAGCACCAAGTAGACCTATCTTCTCTGATGCTGGTATGATTGACTATCTCAGTGGTGATGCATACAAAACAGAAGCATCCCATGAGCACTCTGAACCAATTTCATATGCCGTGCCTGTTCATTCTAGTCCTGATAATTCTGCCTTAACTGCTACAACAATGTCTTCCTCTCTGACTCATTCCACCAGTACCTCATCACCAATTTTAAACAAACAACCTGTGTATGATGAGCCATTTCCAGTCAATAAATCTTCAGAAAGCCTTCCTCTGTCTACCGGGGAAACACAGTCTTCATGCTTTATTCCACCACCCCCTTCAAGTTATAATCAGAGACAGAAATTTTCTGAACAACAAGGTGTGTCTCATTCAAGTTCTGGGTCGAGTTCCATGAATGACAACTTGTTGGAACAAACCCAGAATATGTCTTTGAATTCATCTAATCCAACCAAACAAGAGAAGCCAGAAGATGTCCTTTTTAAAGATCTAATTGACTTTGCAAAATCCAAAACCTCTTCACCTTCCAAACCCAGTAGGCCATTTTGAGAGATTTTGTATGTATTGCTTATGGTGGTGCAGCTTAAGAATTTTATTCATCAGGTTTTGCTTCTGATCACTCAGATGACCCATTTTATGGTGGTCCTCAGTAATTTTCAAGTATGATTTGTCCCTGCATGTACCTTGTTTAATCAATACATTGCTGCATAGTGCATATATACATGTATAGTGCTCATATTGTTGTTTGCTAAATTTTTCAATAATATTGGATTTTTAGAAGCATA 1943 0.4035 MANDAAACAERATSDMLIGPDWAVNIELCDIINMDPWQAKDAIKILKKRLSNKNHKIQLLALVALETLSKNCGDSVFQQIIERDILHDMVKIVKKKPDLSVKEKILIVIDTWQEAFGGPSGRYPQYHAAYNELKSAGVEFPPREENSVPFFTPPQNRSVHHAAAEYEAAAIQASLQSDASGLSLPEIQNAQGLADVLTEMLNALDPKNPEVVMQELIVDLVDQCRSYQKRVMLLVNETTDEQLLGQGLALNDCLQRVLCQHDNIVKGTPDTGKRGTETSILPVVNVNNDEDESDDDFAQLAHRSSRNTNAQKQKPAFDKAEPVRVSPFLPPPPAPSRPIFSDAGMIDYLSGDAYKTEASHEHSEPISYAVPVHSSPDNSALTATTMSSSLTHSTSTSSPILNKQPVYDEPFPVNKSSESLPLSTGETQSSCFIPPPPSSYNQRQKFSEQQGVSHSSSGSSSMNDNLLEQTQNMSLNSSNPTKQEKPEDVLFKDLIDFAKSKTSSPSKPSRPF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g02025 512 SUPERFAMILY GAT-like domain 139 267 - -
Pste8g02025 512 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Pste8g02025 512 Gene3D - 175 272 IPR038425 -
Pste8g02025 512 Pfam VHS domain 10 136 IPR002014 GO:0035091|GO:0043130
Pste8g02025 512 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Pste8g02025 512 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Pste8g02025 512 MobiDBLite consensus disorder prediction 416 484 - -
Pste8g02025 512 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Pste8g02025 512 CDD VHS 10 135 - -
Pste8g02025 512 PANTHER TOM1-LIKE PROTEIN 1 505 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pste8g02025 512 CDD GAT_GGA-like_plant 186 264 - -
Pste8g02025 512 MobiDBLite consensus disorder prediction 303 340 - -
Pste8g02025 512 PIRSF TOM1 1 510 IPR014645 -
Pste8g02025 512 MobiDBLite consensus disorder prediction 379 490 - -
Pste8g02025 512 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Pste8g02025 512 FunFam TOM1-like protein 2 4 151 - -
Pste8g02025 512 MobiDBLite consensus disorder prediction 379 403 - -
Pste8g02025 512 Gene3D - 2 158 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g02025 Pste-Chr8 16357023 16363572 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02025 8 16357023 16363572 Pste8g02025 8 16357023 16363572 ECH
Pste8g02025 8 16357023 16363572 Pste2g03262 2 32520133 32527144 PCT