LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste8g01995	GCAAATCGCGTATTCCAAGTTTGGGATTCGGATTTAGAAAATCCTCAAATTTCTTCCCGAAAATCACTTTTCACTCTCTCACTCACTCTACTTGTCACTGTTTCGTACACCCAACACAACATCACATGTAATTACAACAGCAACACAAACACAAACACAAACACGTTATCTCTTCCTACAACGTCGTCGTTCTCGTTTCAATTCTCATTTCAACGTTCAACGTTGTTTCTCGAAACCTTAATCAGCAAGATCCACGCGAGGTTTTCGAATTTCCTGTGTTGTTTCCCTCTTACTGAAAAAATGAAGCCTTTAGCGATGCTATGGTCTATTGATACTGTCAAAACGTCGTCGTTTGTTAGAATCACCGCCGTCTCGATCTTCTCCCTCTCCCTCTTCCTCTTCCTCTTCCTCTTCACCCGGTTTTCTCCTAACAATTATTCTTCTTCGCTCGCGTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGGAGGCACCGTCGCCGGAGGAATCACCGCCGCGTCCGCCACCGCCGGTGAAAATATTCCGTGTGCCGCCGTTACCGCCGGTGGAGCGGATGGGGATGCTGGACGGGAACGGCGTGATGACGGAGGATTTTAAAGTGGGGGAATTGGATCCTGGTTTTGAAGATGATTTGTTAAACGACACCGTTTCAGGGGGTGATGGTGGTGGTGGTGGTGGTGGTGTTGTTGTGAGGAAGAAGGTGGGGAAGTATAAGGTGTGTGATGTGAGGATGGTGGATTATGTGCCGTGTTTGGATAACGAGAAAGCGATTAAGGAGTTGAAGGGCGATAGAGGGGAGAGGTACGAGCGGCATTGTCCGGAGAAAGGGATGGGCTTGAATTGTTTGGTGCCGAGGCCCAAAGGATACCGGAAGCCCATCCTCTGGCCCAAAAGCAGAGACGAGGTTTGGTTCAGTAATGTACCTCATACACGTTTGGTTGAGGATAAAGGTGGCCAAAATTGGATATCAATAAAGAAGGATAAATTTGTTTTTCCTGGTGGAGGAACACAATTTATACATGGTGCAAATAAATACCTGGATCAGATTTCTGAGATGGTTCCCGATATTGCATTTGGTCACAAAACCAGAGTTGCTTTAGATGTTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTCGATGCAACGTAATGTGACAACTCTTTCAATAGCTCCAAAAGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGAGGTGTGCCAGCCATGGTAGCAGTATTTGGTACACACCGTTTGTTATTTCCAAGCCAGGCATTTGACCTGATCCATTGTTCAAGATGCAGAATTAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGCCAACAGGCTCCTTAGGGCTGGTGGCTACTTTGTCTGGGCAGCACAGCCTGTTTACAAACATGAAGAGAGCCTTCAAGAACAATGGAAAGAAATGGAGAACCTGACAGCTAGCATTTGTTGGGAACTTGTACGGAAGGAGGGTTATATTGCTATATGGCAGAAACCTATGAACAATAGCTGCTACCTTAGTCGAGAGATTGATGCGCATCCTCCATTATGTGAGTCCGATGATGATCCAGATAATGCATGCATCACTCCATTACCTAGTAATGGATATGGAGCAAATGTTACAGAGTGGCCTTTGCGACTTCATCAACCACCAGACAGGCTCCATAGCATCCAATTGGATGCCATTATATCCAGAGGTGAACTCTTGAGGGCTGACACAAAATATTGGTATGAAATAATAGGAAGTTATGTTCGGGCTTTCCGTTGGGACGAGTACCACCTCAGAAATGTAATGGACATGAGAGCAGGATTTGGAGGGGTTGCTGCTGCGTTGCATGATCTCCACATTGACTGTTGGGTTATGAATGTTGTTCCTGTTAGTGGATTCAATACCTTGCCTGTTATATATGACCGTGGGCTGATAGGAGTTATGCATGATTGGTGTGAACCATTTGATACATACCCAAGAACATATGACCTGCTGCATGCAGCAGGTCTTTTCTCTGTTGAAAAAAAGAGGAAAAAGTGTAATATCTCAACCATTATGCTTGAGATGGATAGGATGCTAAGACCTGGAGGGCGTGTATATATACGTGACACCACACTTGTGATCTTTGAACTTGAAGAAATTGCAACTGCATTGGGATGGTCAAATGCCCTAAATGATGTAGGAGAGGGTCCCTATTCAAGCTGGAAGATATTAAGGTCTGAGAAAAGGTTCTGATTGCTTAATAGTGTCAGTAACTTATATAGCACACAGTATATTAGCTCATGCAACCAGAACATGGTGGTTCACTTGAATTCTCATTGTGCCAGAAATGTGGCCAATACTAACCCATGCATTTTTTTTCAAGAAAAAAAAAATTTATATTTGCCAGAAATGGTTGTGTGGTTAGAATGTTGAATCCTACTAACAGTTTTTGTTGTGATAAAAAATTTAAAGAAATTGCATTGTATCAAATGTCAATCTCTACAGCATTACTAGATATGTTTAGTCTTTTTCTTTCTTTTTATAAACAGATATGTTTAGATGATAGTTTCATCTATTTGATTCTAGTTTGATGTAAGGTTAAGTTATTGTGTAGACTGTACCAAATGCTTGAAATTTGTTTATTAGGTGACAATAAAGCTTCAATTGTAATGTGATCTCTTTCCTTCC	2700	0.4256	ANRVFQVWDSDLENPQISSRKSLFTLSLTLLVTVSYTQHNITCNYNSNTNTNTNTLSLPTTSSFSFQFSFQRSTLFLETLISKIHARFSNFLCCFPLTEKMKPLAMLWSIDTVKTSSFVRITAVSIFSLSLFLFLFLFTRFSPNNYSSSLAFFSSSSSSSSSSGEAPSPEESPPRPPPPVKIFRVPPLPPVERMGMLDGNGVMTEDFKVGELDPGFEDDLLNDTVSGGDGGGGGGGVVVRKKVGKYKVCDVRMVDYVPCLDNEKAIKELKGDRGERYERHCPEKGMGLNCLVPRPKGYRKPILWPKSRDEVWFSNVPHTRLVEDKGGQNWISIKKDKFVFPGGGTQFIHGANKYLDQISEMVPDIAFGHKTRVALDVGCGVASFGAFSMQRNVTTLSIAPKDVHENQIQFALERGVPAMVAVFGTHRLLFPSQAFDLIHCSRCRINWTRDDGILLLEANRLLRAGGYFVWAAQPVYKHEESLQEQWKEMENLTASICWELVRKEGYIAIWQKPMNNSCYLSREIDAHPPLCESDDDPDNACITPLPSNGYGANVTEWPLRLHQPPDRLHSIQLDAIISRGELLRADTKYWYEIIGSYVRAFRWDEYHLRNVMDMRAGFGGVAAALHDLHIDCWVMNVVPVSGFNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRKKCNISTIMLEMDRMLRPGGRVYIRDTTLVIFELEEIATALGWSNALNDVGEGPYSSWKILRSEKRF	754

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste8g01995	754	MobiDBLite	consensus disorder prediction	169	186	-	-
	Pste8g01995	754	Gene3D	Vaccinia Virus protein VP39	352	516	IPR029063	-
	Pste8g01995	754	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	278	500	IPR029063	-
	Pste8g01995	754	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	604	714	IPR029063	-
	Pste8g01995	754	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	171	736	IPR004159	GO:0008168
	Pste8g01995	754	MobiDBLite	consensus disorder prediction	161	186	-	-
	Pste8g01995	754	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	255	752	IPR004159	GO:0008168
	Pste8g01995	754	FunFam	probable methyltransferase PMT3	350	513	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste8g01995	Pste-Chr8	15838261	15847720	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste8g01995	8	15838261	15847720	Pste8g01995	8	15838261	15847720	ECH