Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01979 CAAAAAATAAATCGTACTGCAGTTGCATTTTTATTTTAAATATTACAAAATAGCATACTAATTTTTCTATGTTCTCCACCGATGGTAGCATGCATCGACATGACATTCTCGGCGGACATGACCGCCGCTCTGCCACCGTCGTATCAGTGCTTCTTCAAGCCTCCTCCCTCGTTCTTGGGCTTGGGCCTGGGCTTTGAGTTTCAGAAGAAGGGTGGCAGAAGGCTCCGTAGACACTTCAACTTGGTCATCAGGGCTCAGCTTTCTGACTCCTTTTCGTTGAGTTTCGGACTCGACTCTCCGAACTTAGGTTCTTTCCAATCCAATGATACATCACAGTTGTCCTGGATGGGTCCAGTTCCAGGTGATATTGCTGAAGTCGAAGCATTTTGTAGGATCTTTAGGAATTCAGAAAGGCTTCATTCTGCATTAATGGACGCATTATGTAACCCATTCACTGGTGAATGTAGTGTTTCATATGAGGTTCCATCAGATGAGAAACCTCAACTAGAAGATAAAATAGTTTCTGTCCTAGGATGCATGGTATCCCTTGTGAACAAGGGCAGGGAGGATATTCTTTCTGGAAGATCCTCAATTATGAATTCCTTTCGTGCTGCAGAGGTTAACACAACAGATGATAAGCTGCCCCCACTTGCCCTTTTTAGGAGTGAGATGAAAAGGTGTTCTGAGAGCTTGCACGTTGCTCTTGAGAACTATTTAATACCCAATGATGATCGAAGCTTAAATGTGTGGAGGAAACTTCAAAGACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGGGAAGGTTGTCCCTGTCACACACTGTTTGCAAATTGGAGTCCTGTATATTTATCTGCTTCTAAAGAGGACATAGAATCCAAAGGCACAGAGGCAGCCTTTTGGAATGGTGGTCAGGTAACAGAAGAGGGCTTGAAGTGGTTACTGGATAAAGGATATAAAACCATTATTGATCTCAGAGCAGAGACTGTAAAAGATAACTTCTATGAAACGGCTCTGCATGATGCTATTTCATCTGGAAGAATTGAATTGGTAAAAATCCCAGTTGAAGTTAGGACTGCACCTACAATGGAACAGGTTGTGAAGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGGCCTATCTATCTTCACAGCAAGGAAGGAGTTTTGAGAGCATCTGCCATGGTCTCCCGATGGAGGCAGTACATGACTCGATCTTCATCACAGGTTGTTTCTAATCAACCAGTTACACCTGATGACATGTTAACACGTTATACAAATGGATCTGCAAAACATCAGGACTCTTCACTGACTGCAGAGAGATCCTCCCTGGAAAAGGATAACAATTCATCAAGAGAGAGTTTGGACTCAACAAATAGTTCTGTTGTAACATTTGACAGAAGTATCTCTCAAAAGAATAGTAATGGTAAAGCACAAGGTACAGCCTCGAGTGAAGTTTCTACTGATAATGGGGAATTATCAGAAACCACTGCTACTAATGACGAAGGATCATTTCCACGAGACTTCCGCAAAATAAACCCTTTAAAGGCTCAAGTGCCACCTTGTGATATCTTTTCCAAAAGAGAGATGTCAAAATTTTTGGGAAACCGGAAGATCTCACCACCTTCTTATGTCAATTATCAGAGTAGAAGATTGAATATCACAAGATTACAGGGAGGTTTGATTGGTAGAAGTAGTGATAATCCAACACCTAAAATTGTTGGTCCAGAAAGGTCAAATGGATCGGCTCTTGTGGATCATCCATCTACAGAGTCCCAGATTACAGTTGGTGACAATTGGAAGTTAGTGAACAGGGGTACTTCTAGTTCTGTTAGGACAACGGTAAATGGATTTAGTGAACAGGGAATGCATTACGTGACTACTGCCAATGCTTCCAACATTGTGAAGAATGATTTGGATAATGTCACGACTAATTCTGAAAGGATTAAAGGTCAGATGGTTAAGGGTAGGTTAGCCTTAAACGATGACGACTTGGGATCCATTGAAGGAGATATGTGTGCTTCTTCAACAGGAGTTGTAAGAGTGCAATCAAGAAAGAAAGCTGAGATGTTCCTAGTTCGAACAGATGGATTTTCTTGTACCAGAGAAAAAGTGACCGAATCTTCTTTGGCTTTCTCTCATCCTAGCACCCAGCAGCAGATGCTTATGTGGAAATCTATGCCAAAAAATGTGTTATTGTTGAAAAAGTTGGGTGAAGAACTAATGGAAGAAGCAAAAAGGGTTGCTTCTTTCCTTTATCACCAAGAGAAAATGAATGTTCTTGTGGAACCTGATGTGCATGATATATTTGCTAGAATTCCGGGGTTTGGATTTGTTCAGACGTTCTACAGTCAAGATACCAGTGATCTACATGAGAAGGTAGATTTTGTGGCATGCTTGGGTGGAGATGGTGTTATACTGCATGCATCAAATTTATTCAGAGATGCCGTTCCCCCTATTGTGTCATTTAACCTTGGCTCCCTTGGTTTTCTGACTTCTCATGATTTTGAAGATTACAAGCACGACTTACGACAAGTCATCCATGGAAATAATACACGAGATGGTGTGTATATTACTCTTAGAATGCGTCTCCGATGTGAAATTCTTCGTAAAGGTAAAGCAATGCCTGGCAAAGTATTTGACATCCTCAATGAGGTTGTTGTTGATCGCGGTTCTAATCCGTACCTTTCAAAGATTGAATGCTATGAACATGATCGACTTATAACAAAAGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACAGGAAGTACTGCCTATTCTACAGCTGCTGGAGGATCCATGGTCCATCCAAATGTTCCTTGCATACTGTTTACCCCAATATGTCCACATTCACTCTCATTTAGGCCAGTTATACTTCCAGATTCTGCAAGACTAGAATTGAAGATTCCTGAAGATGCAAGAAGTAATGCCTGGGTTTCATTTGATGGGAAGAGAAGGCAGCAACTCTCAAGAGGAGATTCTGTCCGAATATCTATGAGTCAACATCCCCTTCCAACCGTTAACAAGTTTGACCAAACGGGTGATTGGTTCCGAAGCTTGATTCGCTGCCTAAATTGGAATGAGAGGCTTGATCAAAAGGCTCTGTGATGCCTGTGACAGTGAAGAACAGATATGCACTACCCTAATGTGAGTACAGGTCAGGGCTAGTATAATTACTGTACAGCTTATACATTGAGATTACAGAACTTAGATATATAGCAGATACCTCCACTTTATTACATTGGCTACCATTGTGAAGATAGGGTTTGCCAATGAATTTTCCACATGTTATAATGCCAAGAAGCTGTTGTATATACATTTATAGAAAGTAGTAAATTTTTTATCTTGGAAGCTGATCTTTGTACCATCTGAAAATTTGATCACTATTTTGCTAGACTTGATTATCTCCATGGGCACATGTGAATTCTTTCTGACATACAAACTAGAGGTACTTTTTCATGCCATAATGTTGGAAGCAGAAACTGCAAAATCTAGCTTAAGTAATTGCCGTTTCCTTCCCAGGATTTTAAGATTATTAGTGTTTGGCTATATGGTGACTTTCTATGATATGTATTAGTCTATTAAATGCTTATGAGGGTATAATTTGGATCAATCATAAGCCAAGCAAAGTGACTGAGGTTTTCAC 3652 0.4058 MVACIDMTFSADMTAALPPSYQCFFKPPPSFLGLGLGFEFQKKGGRRLRRHFNLVIRAQLSDSFSLSFGLDSPNLGSFQSNDTSQLSWMGPVPGDIAEVEAFCRIFRNSERLHSALMDALCNPFTGECSVSYEVPSDEKPQLEDKIVSVLGCMVSLVNKGREDILSGRSSIMNSFRAAEVNTTDDKLPPLALFRSEMKRCSESLHVALENYLIPNDDRSLNVWRKLQRLKNVCYDSGFPRGEGCPCHTLFANWSPVYLSASKEDIESKGTEAAFWNGGQVTEEGLKWLLDKGYKTIIDLRAETVKDNFYETALHDAISSGRIELVKIPVEVRTAPTMEQVVKFASYVSDCSKRPIYLHSKEGVLRASAMVSRWRQYMTRSSSQVVSNQPVTPDDMLTRYTNGSAKHQDSSLTAERSSLEKDNNSSRESLDSTNSSVVTFDRSISQKNSNGKAQGTASSEVSTDNGELSETTATNDEGSFPRDFRKINPLKAQVPPCDIFSKREMSKFLGNRKISPPSYVNYQSRRLNITRLQGGLIGRSSDNPTPKIVGPERSNGSALVDHPSTESQITVGDNWKLVNRGTSSSVRTTVNGFSEQGMHYVTTANASNIVKNDLDNVTTNSERIKGQMVKGRLALNDDDLGSIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFSHPSTQQQMLMWKSMPKNVLLLKKLGEELMEEAKRVASFLYHQEKMNVLVEPDVHDIFARIPGFGFVQTFYSQDTSDLHEKVDFVACLGGDGVILHASNLFRDAVPPIVSFNLGSLGFLTSHDFEDYKHDLRQVIHGNNTRDGVYITLRMRLRCEILRKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01979 1010 Pfam ATP-NAD kinase C-terminal domain 857 983 - -
Pste8g01979 1010 FunFam NAD kinase 2, chloroplastic 692 857 - -
Pste8g01979 1010 MobiDBLite consensus disorder prediction 381 411 - -
Pste8g01979 1010 MobiDBLite consensus disorder prediction 534 564 - -
Pste8g01979 1010 Pfam ATP-NAD kinase N-terminal domain 736 823 IPR002504 GO:0003951|GO:0006741
Pste8g01979 1010 Gene3D - 692 1002 IPR017438 -
Pste8g01979 1010 MobiDBLite consensus disorder prediction 427 477 - -
Pste8g01979 1010 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 274 380 IPR029021 -
Pste8g01979 1010 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 706 1005 IPR016064 -
Pste8g01979 1010 MobiDBLite consensus disorder prediction 412 426 - -
Pste8g01979 1010 FunFam NAD kinase 2, chloroplastic 837 977 - -
Pste8g01979 1010 Gene3D Protein tyrosine phosphatase superfamily 268 401 IPR029021 -
Pste8g01979 1010 FunFam NAD kinase 2 chloroplastic 266 400 - -
Pste8g01979 1010 Hamap NAD kinase [nadK]. 703 1001 IPR002504 GO:0003951|GO:0006741
Pste8g01979 1010 Gene3D - 837 977 IPR017437 GO:0003951|GO:0019674
Pste8g01979 1010 PANTHER NAD KINASE 262 1010 - -
Pste8g01979 1010 MobiDBLite consensus disorder prediction 381 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01979 Pste-Chr8 15564861 15572753 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01979 8 15564861 15572753 Pste8g01979 8 15564861 15572753 ECH
Pste8g01979 8 15564861 15572753 Pste2g03200 2 31860123 31864428 PCT