Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01975 GTAACTCTGCCACTCCAAACACTTATATATACCCACACACTCTTCTTATTCCATGCACAAACCCAAGACAAATTTCTTCAGAAGTTGCAACATTGTCTGAATTCTGAAGACCATTTTCTTGCTCTTTGATTCCTAAACATACTTAGGTGTGAGCGTGTGTGTAACACTCAACTTCTCAACTTAGTAACACTTGAAATTTTAGTTAAACTCACTCTCATAAAGTAGTCACCGCTTCATAGCATTTAACAACCGCTGAATCCATATTTGAGACTCCCATTTCCTATTTTTGTTTTCTTTTTATGTTGATTGATTTATTGATCAGAATCATATATAACTTGGAATCCTACTCAGCAGTGTGCACAAACTCAGAGACTGCTTATTAGAGTTTGAGTCTTGACTCAGAAGCCTAAGTTGGGTTGGAGTCTATCTCTCTATCTCGCATAGCAAGATGATTGAAAACAGTGGCAAAGATACATTTGAAGTTTCCAGTGAGGCGCTTTCACAGACAGGTTCCAAGTACTTTGATGATGATGGCCGTCCCAAAAGAACTGGAACTGTTTTGACTTCAAGTGCTCACATAATAACAGCTGTTATTGGTTCTGGGGTGCTATCTTTAGCTTGGGCTATTGCCCAACTAGGTTGGGTTGCTGGTCCTGCTGTGATGATTCTCTTCTCTATGGTGACCTATTACACCTCAACTCTTCTAGCTGCTTGTTACCGTACTGGTGACCAACTCAGTGGCAAGAGAAACTACACTTACACACAAGCTGTTAGCTCCTACCTTGGTGGTGCTAATGTCAAGTTTTGTGCGTGGGTTCAGTATTTGAATCTTTTTGGAGTGGCAATTGGGTACACCATAGCAGCTTCCATAAGCATGATGGCAGTCAAAAGGTCCAATTGTTATCATTTTAGCGGAGGAAAAAATCCGTGCAAAATGAACAGTAATTTTTACATGATTTCATTTGGTGTTGCGGAGATTATCTTCTCCCAAATTCCAGATTTCCATGATTTATGGTGGCTTTCTGTTCTTGCTGCTGTTATGTCCTTCACATACTCATTTATAGGACTTGGTCTGGGTGTTGGCAAAGTAGTGGGAAACGGCAGAATTAAAGGGAGCATGACTGGTGTAACTGTCGGTGCTAGTGTGACAGAAGCCCAAAAAGTTTGGAGGAGCTTTCAAGCTCTTGGTAACATAGCCTTTGCCTACTCCTACTCAATGATCCTTATAGAAATCCAGGACACAGTGAAATCCCCTCCAGCAGAGTCAAAGACAATGTCCAAGGCAACTTTAGTGAGTGTTTTAGTCACAACAATTTTCTACATGCTTTGTGGATGCTTTGGCTATGCTGGTTTTGGAGATGCAAGCCCTGGAAACCTTCTCACTGGCTTTGGCTTCTTCAATCCATATTGGCTAATTGACATAGCCAATGTTGCCATTGTTGTCCACCTTGTTGGTGCATACCAAGTTTACTGCCAACCCCTTTTCTCATTTATTGAACGCCAAGCAAAACAAAGATTTCCAGATAGTGATTTTATGAGCAGAGAGTATGAAGTGCCAATCCCTGGTTGCAAACAACCCTACAAGCTTAACTTCTTCAGGTTGGTTTGGAGGACAATTTTTGTGATACTATCTACTGTGATAGCCATGCTCCTACCTTTCTTCAATGACATTGTGGGGCTACTTGGAGCCATTGGATTTTGGCCCCTCACAGTGTATTTCCCAGTGGAGATGTACATAGTTCAAACCAAAATACCAAAGTGGACCATGAAATGGATATGCCTACAAATGCTTAGTGCTGCATCTCTTGTAATTACTCTGGTAGCTGCAGCAGGTTCCATTGCTGGAGTTGTTAGTGATCTTAAAGTTTACAAGCCATTTGTTACAAGCTACTAATTGAATAGGATTAATTAGCAGTCTTGATCACCATTGTCAAAGATTTCATTAGCAATAGAGAAAAAAAACAGTAAATGCTTGCTGATATGAAATCTATAGGAAGGTTGATCTTAGTTATTTATTGCTTAGTAACCTTGTATCTTGTAACTTTTTTGTGATCTCTTAGTTTGTAACTTGTTACGTATTCCTGATTTCCAATGAAAAATGAAGCAAAAAAGTTTCAAATTA 2122 0.3982 MIENSGKDTFEVSSEALSQTGSKYFDDDGRPKRTGTVLTSSAHIITAVIGSGVLSLAWAIAQLGWVAGPAVMILFSMVTYYTSTLLAACYRTGDQLSGKRNYTYTQAVSSYLGGANVKFCAWVQYLNLFGVAIGYTIAASISMMAVKRSNCYHFSGGKNPCKMNSNFYMISFGVAEIIFSQIPDFHDLWWLSVLAAVMSFTYSFIGLGLGVGKVVGNGRIKGSMTGVTVGASVTEAQKVWRSFQALGNIAFAYSYSMILIEIQDTVKSPPAESKTMSKATLVSVLVTTIFYMLCGCFGYAGFGDASPGNLLTGFGFFNPYWLIDIANVAIVVHLVGAYQVYCQPLFSFIERQAKQRFPDSDFMSREYEVPIPGCKQPYKLNFFRLVWRTIFVILSTVIAMLLPFFNDIVGLLGAIGFWPLTVYFPVEMYIVQTKIPKWTMKWICLQMLSAASLVITLVAAAGSIAGVVSDLKVYKPFVTSY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01975 481 PANTHER OS05G0424000 PROTEIN-RELATED 37 464 - -
Pste8g01975 481 FunFam Amino acid permease 6 30 471 - -
Pste8g01975 481 Pfam Transmembrane amino acid transporter protein 33 468 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01975 Pste-Chr8 15466168 15469028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01975 10 481 Organic Solute Cotransporters AT5G09220 70.464 0.0 714
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01975 8 15466168 15469028 Pste8g01975 8 15466168 15469028 ECH
Pste8g01975 8 15466168 15469028 Pste2g03177 2 31672629 31676989 PCT