Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01971 AGCCCGCTTTACCCAGGCTCCATGGAGATGATGTTCATGACTTAGGAGTTGTTCCTTCCAAGGATGAATTCTTTGCAACATTAAAAAGAATGGAATCTTTTAAAGCCCCTGGGTTGGATGGGTTTCAAGCCTTATTTTACAAGATGTATTGGGATAATGTGAGGGATAAAATGTGTCAGAGGATCTCCGGACAACCAACTTTGTGGAATGGATCCTTGTTGAGTAGAGCAGGTAGGGTTACCTTGGTGAATTCTGTCATGGCAGCCATACTCGCGTATACTAAACAGATACAATGGGTACCCCAAGGTATTTGTGATGCTTTGGATCGAGCAACATATAAGTTTATTTGGAGTGGAATGGGCTTAAGAAAACTGCATATGGTGAAATGGGAAACAATCACAAGGTCGCGTCGATTTGAGGGCTTGGGCATCAGGATTGCTTGTCTTCAGAACATTTTGTTGCCAGGGAAGCTAGTTTGGGACCTGCACCATAGTAGGGACAAATTATGGGTTCAACTGATTCTTCATGGTCCCCTTCCTACTCAGCAGCTGGTATGGTCAAGGCATGTGGGACTGGAAGATATCTGCCTATGTTGTCACATAGAGATTGAAGATCTCTTCCACATGTACGCATACACCAACTTCCTTTTTGGTATATCAGATTTCGAGGATCCTATAAGAAGACACAAAAAGAGAATAGTGAGTTGTATTCATGCAAAGGAGCTGCAAATAACAATGCATGTGGATGATAGTGCTCGTGGAAACCCATATCCTGTGGGTGGCTTAACCCCAAAGAAAACTAAGCCCCCAAAACCTAACACTCTTCTCTGCATCACCATCTTCGTAGCTGGGATCAAGAACATGTCGATCTTCGAGTACAACGGAAGTGCTGTGGTGGCTATGGTCGGAAAGAACTGTTTCGCCATTGCCAGTGACCGAAGACTCGGTGTTCAGCTTCAAACCATAGCCACCGATTTTCAACGAATTTCAAAGATTCACGATAAACTCTTCATCGCTCTCTCTGGCCTTGCCACCGATGCTCAGACACTGTATCAGCGTCTTGTTTTTCGGCACAAACTTTATCAGCTTCGTGAAGAGAGGGATATGAAGCCGGAGACTTTTGCTAGCTTGGTGTCTGCTCTGCTATATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGACTAGGGGATGAAGACAAACCTTTCATTTGCACAATGGATTGCATTGGAGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGCGAAGCGATGTTTAAACCTGACATGGAACCAGAGGAGTTGTTTGAGACCGTCTCTCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGTTGGGGAGGACATGTCTATGTTGTCACACCAACTGAAGTGAAGGAAAGGATTTTAAAGGGGAGGATGGATTAACTTTAAAGCCACCTTGGTTTCTGTTTAGTTTGGAGTTGAATGGTAAAACATTTACATTCCTTTGTTAAAGGGTACCCTTTTATTGTGGCTCTTTAGTTAATGTACCATGAAAAATATTTTATATATTTCAATCCCGATATTTTCCCCCTTCTTTTCAGGTTTCCTTGATAAATTAATTGATTTCAAGTAATGACTGTTTCTTTTAAGTAAACATTCATTTTGATCCGCGTAAGATACAGGCACTGACACTTAGATCCTTGAAATAAATTTTCAGCTAAGAGGGTTCCTAATTATTTTGTCTTTTGTGCACTTTAGTCTTTCCATGAACGGTTTGTTAGTGATGATGTTAAAAATTGAACAATAACTGTTAACTGTTG 1852 0.4168 MESFKAPGLDGFQALFYKMYWDNVRDKMCQRISGQPTLWNGSLLSRAGRVTLVNSVMAAILAYTKQIQWVPQGICDALDRATYKFIWSGMGLRKLHMVKWETITRSRRFEGLGIRIACLQNILLPGKLVWDLHHSRDKLWVQLILHGPLPTQQLVWSRHVGLEDICLCCHIEIEDLFHMYAYTNFLFGISDFEDPIRRHKKRIVSCIHAKELQITMHVDDSARGNPYPVGGLTPKKTKPPKPNTLLCITIFVAGIKNMSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETVSQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01971 461 CDD proteasome_beta_type_3 263 457 IPR033811 GO:0019774|GO:0043161
Pste8g01971 461 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 258 461 IPR029055 -
Pste8g01971 461 FunFam Proteasome subunit beta 258 461 - -
Pste8g01971 461 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 261 460 IPR029055 -
Pste8g01971 461 ProSitePatterns Proteasome beta-type subunits signature. 269 316 IPR016050 GO:0005839|GO:0051603
Pste8g01971 461 ProSiteProfiles Proteasome beta-type subunit profile. 265 446 IPR023333 -
Pste8g01971 461 PANTHER METALLOPROTEASE TLDD 258 454 IPR023333 -
Pste8g01971 461 Pfam Proteasome subunit 264 446 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01971 Pste-Chr8 15350436 15360768 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01971 8 15350436 15360768 Pste8g01971 8 15350436 15360768 ECH