Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01948 ATGGGATCTCTTAGTCTTACCAAGTTTCAGATCCCCCTTGTGTCATCTTTTGTACTTTTATCTATTGTTGCCACAATATTGAACCCAGTAACTGCTGCTAAACAATGTGATTTTCCTGCAATCTTTAGCTTTGGAGCCTCAAATGCTGACACTGGTGGCTTAGCTGCTTCCTTTTATCCTTATTCACCAAAAAAACCATATGGAGAGACCTATTTTAATAGATCAACTGGAAGGTACTCTGATGGTCGAATCATTCTTGATTTCATAGCACAGAGTTTTGGAATCCCTTTCCTCAGTGCATATCTCGATTCTCTAGGGACCAACTTCTCTCATGGTGCAAACTTTGCAGTTGGAGGATCCACTATCAAAACCGCAGGTGGTTCCAGTCCTTTTTCCCTTGGAATTCAGTACTCACACTTTGAACGTTTGAAAAACACTTCACAGTTCATTAGTAGCAAAGGTGGGGTATTTGCAACACTGATGCCCAAACAAGAGTACTTTTCTGAAGCTTTATACACATTTGATATGGGTCAAAATGATCTTACTGCTGGTTTTATGAGTAACAAGACCCTACAGCAAGTTAATGCTTCTATACCTGATATAGTCCAAAGTTTCACATCAACTATCAAGAATATCTCCAATTTTGGGGCCAAATCATTTTGGATACACAATATTGGACCCCTTGGCTGTCTCTCTTCAATTTTAACCAATTTTCGATCAGCTGAGAGGGATAACAATGGTTGTGCAAAGGCATATAATGAAGTGGTTCAGTTTTTTAACCAAAATTTGAAGGAAGCCTTAGCTAAACTTCGTAAGGACATTCCTTTGGCAGCAATCACATATGTAGACATCTATTCTGCTAAGTACTCTCTTTTCAGCAACCCAAAGAAATATGGATTTGAGCTTCCACATGTAGCTTGTTGTGGCTATGGAGGGGAGTACAACTTCAATAGTAGTATTGGATGTGGAAGAACCATAAAGGTGAATGACACCGATAAATTTGTGGGTTCATGTGAAAGACCATCTGCTAGAGTGTTATGGGATGGAATCCACTATACTGAAGCAGCAAACAAGGTTGTCTTTGATCAAATCTCTTCTGGAAATTTCACAGATCCACCCATTACCTTGCAAATGGCATGTTAG 1143 0.3937 MGSLSLTKFQIPLVSSFVLLSIVATILNPVTAAKQCDFPAIFSFGASNADTGGLAASFYPYSPKKPYGETYFNRSTGRYSDGRIILDFIAQSFGIPFLSAYLDSLGTNFSHGANFAVGGSTIKTAGGSSPFSLGIQYSHFERLKNTSQFISSKGGVFATLMPKQEYFSEALYTFDMGQNDLTAGFMSNKTLQQVNASIPDIVQSFTSTIKNISNFGAKSFWIHNIGPLGCLSSILTNFRSAERDNNGCAKAYNEVVQFFNQNLKEALAKLRKDIPLAAITYVDIYSAKYSLFSNPKKYGFELPHVACCGYGGEYNFNSSIGCGRTIKVNDTDKFVGSCERPSARVLWDGIHYTEAANKVVFDQISSGNFTDPPITLQMAC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01948 380 Coils Coil 249 269 - -
Pste8g01948 380 SUPERFAMILY SGNH hydrolase 113 364 - -
Pste8g01948 380 Gene3D SGNH hydrolase 28 367 IPR036514 -
Pste8g01948 380 Pfam GDSL-like Lipase/Acylhydrolase 41 364 IPR001087 GO:0016788
Pste8g01948 380 CDD SGNH_plant_lipase_like 39 368 IPR035669 -
Pste8g01948 380 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 20 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01948 Pste-Chr8 14964513 14966206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01948 5 371 Acyl Lipid Metabolism Gene Families AT4G10950 25.393 7.53e-31 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01948 8 14964513 14966206 Pste8g01948 8 14964513 14966206 ECH