Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01945 GAGAAACAGTGATAGACGCAAAAATGGTGACGACAAAACAAACCTGAAAGCCAACTTGGGGAACTCCTTCCTCAACGGAAACTCCAACAACCACTTCAATAGCTTAATTCACCATTCTGAATCCTATTTAAACCCCTCTCACACTTTCCGCACCTCACTCACAATCATGAGTCCCTACATTTTCGGAGTCCTTCTCCCTCTCCTAGTCACGCTCCTCGTCACCAACTCCAAGAAGAATCCCAAACACCGCGGCGTTCCAGTCCACGCCGCCGGCCAGCCAGGTCTCGCCGTCCGCAACCGCCGCTTCCACTCCCCGGTCCACACCGCCTGGGACGGCGTCACCACGCTCGCCGAGCTTTTCCAGCACGCCTGCACGGCGCACGCGCAGAGCCTCTTCCTCGGCACGCGCCAGCTCCTGCTCCGGGAGCTCCACACCAGCCCCGACGGCAGGTCGTTTGAGAAACTTCACTTCGGAGATTACCGCTGGCTCTCCTACGACGCTGTGTTTCACATCGTTTCGGACTTCGCCTCTGGATTGGCTCGCATCGGACATGTTAGGGAAGAGCGTGCCGCGATCTTCGCCGACACGCGCCAAGAGTGGTTCATGGCACTCCAGGGCTGTTTCAGACGAAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATGTTACTCATTGAATGAGACAGAGGTTACAACAGTGATTTGTGGGAAAAAGGAATTGAGAACACTTTTAAACATTAGTGGACAACTAGACACAGTGAAACGGGTGATATGCATGGATGATGATATCCCATCTGATGCCTCTTCTATTGCATATGAATGGACAATCACTTCCTTTGCTGAGGTTGAAAGACTTGGTAGAGAAAATCCTGTTGATGCTGATCTACCTCTTTCAGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACCGGATTACCTAAGGGTGTGATGATGACACATGGCAATGTCTTAGCTACACTCTCTGCTGTGATGACCATTGTTCCTAACATTGGGACAAAGGATGTGTATCTTGCATACTTACCGATGGCTCATATTTTAGAATTAGCAGCTGAGAATTTGATGGCAGCTGTTGGAGTTCCTATAGGATATGGATCTCCTTTGACCCTTACGGATACATCAAACAAAATTAAAAAAGGAACAAAGGGGGATGCTACTTCACTGAGACCAACATTACTGGCCGCCGTACCAGCAATTCTTGATCGTGTCCGTGATGGAGTTTTCAAGAAGGTAAATGCTACTGGAGGATTGTCAAAGAGGTTGTTTCACTTAGCCTATGCACGGAGATTGCAAGCAGTTAATGGTAGTTGGTTTGGAGCTTGGGGTTTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAGAAAGATCCGAGCAATTCTAGGTGGTCGTATCCGTTTTATACTGTCTGGTGGTGCTCCCCTTTCTGGTGATACGCAGAAGTTCATCAATATTTGTCTTGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATTTTGATGATACATCTGTTGGCCGTGTTGGACCACCTCTTCCCTGCTCATTTATTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAACAAATGACTCGCCGATGCCCCGTGGAGAAATTGTAATTGGTGGTCCAAATGTCACTCTCGGGTATTTCAAAAATGAAGAAAAAACAAAAGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGATATTGGGAGATTTCATGCAGATGGATGCCTTGAAATCATAGATCGTAAAAAGGATATCGTTAAATTGCAGCATGGAGAGTATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGTCCCTTGGTGGACAATATTATGGTTCATGCTGATCCTTTCCATAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTCCACATTGGAAGAATGGGCTTCAGAAGAAGGAATTTCTTGTTCCAATTTTTCAGAACTTTGCACGAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGGAAAGAAGGCTCGTTTGGAGAAATTTGAGACTCCTGCAAAAATAAAATTGCTTTCTGAACCTTGGACTCCTGAGTCTGGCCTAGTCACTGCTGCCCTCAAACTCAAGAGAGAGGCTATAAAAATGACTTTTGATGAAGAACTTTTGGAGTTGTATGCTTCATAGGCTTAGAACACTATTGATCTTTTTACACCTTTTTCCCATTTGCATCAGGCTGGGGTTGAGGTGAGGTGAGGTTTTGTATTTGTTTGTTGCTTATAATTTTTTTTTTCATTTTAAGTTTATCATGCACAGTGAGGCTTATTTTGCAGAAGGTCAATATGTTGAATTTACTTAATAGTGACAATGTAAAGTCAATAATCTTTTTTAGACATTATCGTTGTATCAATATTTCAAATTACAATGTTTCTTCACGAGTAATGAGAATTAAAAAGTATGAACCCACTAGAC 2542 0.4445 MSPYIFGVLLPLLVTLLVTNSKKNPKHRGVPVHAAGQPGLAVRNRRFHSPVHTAWDGVTTLAELFQHACTAHAQSLFLGTRQLLLRELHTSPDGRSFEKLHFGDYRWLSYDAVFHIVSDFASGLARIGHVREERAAIFADTRQEWFMALQGCFRRNVTVVTIYASLGEEALCYSLNETEVTTVICGKKELRTLLNISGQLDTVKRVICMDDDIPSDASSIAYEWTITSFAEVERLGRENPVDADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPNIGTKDVYLAYLPMAHILELAAENLMAAVGVPIGYGSPLTLTDTSNKIKKGTKGDATSLRPTLLAAVPAILDRVRDGVFKKVNATGGLSKRLFHLAYARRLQAVNGSWFGAWGLEKALWDFLVFRKIRAILGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFIKLIDWPEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPLVDNIMVHADPFHSYCVALVVGSQSTLEEWASEEGISCSNFSELCTKEETVKEVHASLVKEGKKARLEKFETPAKIKLLSEPWTPESGLVTAALKLKREAIKMTFDEELLELYAS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01945 696 ProSitePatterns Putative AMP-binding domain signature. 254 265 IPR020845 -
Pste8g01945 696 Pfam AMP-binding enzyme 101 563 IPR000873 -
Pste8g01945 696 Gene3D - 58 555 IPR042099 -
Pste8g01945 696 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 49 694 - -
Pste8g01945 696 SUPERFAMILY Acetyl-CoA synthetase-like 56 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01945 Pste-Chr8 14877547 14887622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01945 149 695 Acyl Lipid Metabolism Gene Families AT1G77590 79.707 0.0 926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01945 8 14877547 14887622 Pste8g01945 8 14877547 14887622 ECH