Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01916 TTGAAGTGGAGTAGGAAGGAGGAAAGGCAAGAGAGAGAGAAGTGGAAAGAAATTGGGAAGAAAAGAGTGTGAGAGAGAGAGAGAGAAAGAAAGGAAAGGATAGTCGGCGCCCCATGTCCCCGCCGACCAATCATAACGTCGTTTTCATACCCACCTTCTTCTCCTTCTCGCACTCCTAACTCCTCTCTCTCACCTTCTCTTCCAACACTAAATCTTCTTCTTAAATATAAATCTTAAAACCCTATTCCTTTCTCTCCCTCCTCGGGTTCTTCCCATTTATATTTTTTCCAAAACACGGAACCCCTTCTTCTTCTTTTAGCTTAGTTTTCCTCTTCTATCTCCATTCGTTTCCTTTTCCCTGAATTTCTTCTTTCGGGGCATTTTTTTATTTCCAAAAATTTCTTCTTTTCTCTGAGAATTATGAGGGCCACCGCGGTTGAAGGATCCTTCGCCGAGAAGTTCGACGACGGCGAAAAGGAGAAGAAGAAGAGGCGCCGATCCAATCGTCGATCCAAGCAAAACCCTCCCTCGTCTTCAGCATCTGAAGTGAATGAGGCCCAGGGGGTGTCGCCAGATTCAGGGAAAATTGGAACACCTAATCAAGCTGCTGCATCCTTGGGCAGTTCATTGAAGCAAGTCAATGTGTGTGCTTCTACTCAGCAAGAATTATCCAAAGTGTCAAATGTCGAATTTCTTTCAATGCCCCCCATGCATATCAATGAGCAAGTGGAGCCTGATGATTTGCAGATTGTTCCAATGTATGGTGGAGGGATTGATTCAAAATCATTTTCTGAGTCCACTGGTTACAGAGGGTCATTAGGAGTTAATAAAAACAAGGACCCAGTACCTTATGGTCAAATTGGGTTCTGTGGCCAGAAAAATTATTTTACTCCACACTGGTCCATAGAGTCTGTTGAGAAGGCATTAGAGAAGGGCGATGTTTTTAAAGCTCTCTTTCATGTCAATGCTCACAATAGAATTGAGGTTTTTCCTAATGCCCATCTCACAGCCTACTGCAGAATTGATGGAGTGTGTACTGATGTTCTCATTGGTGGGATTCCAGCCCAGAATAGAGCTGTGGAAGGTGATATTGTCGCAGTTAAGATTGATCCCTTGCCATTGTGGACTAAAATGAAAGGACCAAATGGGTCTTGTAACAACACTGCAACACTGGAAAGTTGCAACCTTCTTACAGAAGATAATGAAGTGGGTGGTAATACTTGTAAAGGGAATGATAAAGTAGACGCTGATTCTGAGTCTGTCAATTGCAGAAGCTATTCTGGTCAAAACAAGCAGGATGCTGATCAGAACTCCTATAGAAGTTGTCCTTTTCCTGAAAAAACAGTTATTTACCAGGATAATACCTCCCGGGGTTCTATTAACCATTTAGTTCTACATGGAAAGGCCAACCATGGTGGCATTAATGGTCATCACTGTGATGCTCCTGATTCCTTAAAGAGTGATTCGTGTAGTGGGCAAAGCGGAGTAGTTAATGCAGTGGAAAAGTTATGTTTGTCAGTTGATTCTTTTCCCTCTAAAAGACCAACTGGCAGGGTGATGGCTATTATTGAGAGATCTCCACGCCGAGAGGGTATTGTAGGTCACCTTAATGTGAAGCAATGGGTTTCTTTCAGGGACATAAATAAAAAGGATGTGAAGAAGAATAAGACTTTGATTTCTGACCATGAATACATCCAGCTGACACCAACTGATTCAAAGTTTCCAAATATGAGGCTTCTTGTTAGAATGTTACCCAAGTGCATTAAGAAAAGGCTGAAAAGTGGTGATGTGACAATTGAAATGGATCTGGTAGCTGCACAAATTGATGATTGGGTTGAAGAAAGTCCTTTTCCTGAGGCTCACATCTTGCATGTTTTTGGACGAGGCAGTGAAGTGCAGACTCAATTAGATGCAATTTTGTTTCAGAATGCAATCTGTCTGTCTGAATTTCCACCTGAAGCTCTGTCCTGTCTACCATGTGTTCCATGGGAGGTACCACTGAAGGAAATTCAGAGTAGAATAGATCTTAGAAATTTGTGCATATTTACTATTGACCCTTCAACTGCTACTGATCTGGATGATGCACTGTCAATTGAGAAGTTACCTAATGGAAATTATAGAGCAGGTATCCACATTGCTGATGTGTCATATTTTGTTTTACCTGACACAGCCTTGGATAGTGCAGCTCAGTTTAGGTCAACAAGTGTCTATATGTTGCAAAGAAAGTTACCTATGTTACCTGCATTATTGTCAGAGAATATTGGTTCACTTAGTCCTGGAGTGGATCGACTTGCAGTTTCAATGCTCGTGGATATAAATCCTAAGGGGGATATTGTAGACCGTTGGATTGGTCGTACTGTCATACATTCCTGTTGTAAGCTTTCATATGAACATGCTCAGGACATCATTGACAAGGATTTTGCTTTTGAAAGTTCAAATTTCATTGGAGATGGATATCCTAGAGTGTACAGCCAATTTGAATGGCCTGATGTTATTAACTCTTTGAAGAGTCTTTATGAAGTCTCAACTGTCTTGAAACAGAAGAGGTTTACTGATGGGGCTCTACGGCTTGAAAATCCCAAAATTGTTTTCTTGTTTGATGACAATGGAATTCCTTACGGTAGTATGCTTTCTGAAAGGAAAGAATCACATTTTCTTGTTGAGGAATATATGCTTTTGGCTAATAGAATCGCAGCTGAAGTCATATGTAGAGCTTATCCTGATGGTGCATTGTTGCGGAGGCATCCAGAACCTAATATGCGGAAGCTGAGAGAGTTTATGGCATTTTGTCAGAAGCATGGTTTAGAATTGAACACATCTTCATCTGGTCAGTTCCATTACTCGTTAGAGAAGATCAGGGAAAAGCTCAAGGGTGATCCTGTTCTTCACAATATACTTATTTCTTTTGCTACAAGGCCAATGCAGTTGGCATCTTACTTTTGTAGTGGAGATTTAAAGGGCAGTGAAAATGAATGGGCTCATTATGCTTTGGCCGTTCCATTTTACACTCATTTTACGTCACCTCTGCGTCGGTATCCGGATATTATTGTTCACCGGACATTACTTGCTACCATAGAGGCTGAGGAATTATACATGAAGCATCAGAAGGCTTTGCAGGGTTCCAAGGAAGTGAAAGTGCAAAAAGGATGTTTCACAGGTATCAATTTTGATAAAAGTGCTGCAGAATCCAAGGAAGGTAGGGAAGCACTATCAGCTGCAGCTGTGAAGCATAGTGTTCCATGTGCTGAAATACTTGCAGATATTGCTGCTTATTGCAATGAGAGAAAGCTTGCTAGTAGAAATGTCAAGGATGCGTGTGATAAACTTTACACATGGTTTCTCCTGAAGAAAAAGGAGGTTTTATTGTCAGAGGCCAGGATACTGGGACTAGGCCCAAGATTCATGTCAATTTATATTCAAAAGTTAGCAATTGAACGGCGCATATATTATGATGAAGTTGAAGGCTTGACTGTTGAGTGGCTTGAGACAACATCCACTTTGGTGCTTAGCATGTCTACTAATAGATGTGCATTTAGGAGGGCCTGCCCTAACAAGTGGAAGGCATTTGAAGAAGTTGCATTGCTTACATGTCCATGTAACCTGGATGTTACCATGGATAATTCTAACCAAAGTGATGCAATGAAAGTGGATAGTATGTCAGCCATGGACAGGGAGCCAATTTCAAGATCAGGCACATCAGAAACTGAAATCGACCCTGCTGTTTTCCCACTCACAGTGCGTCTTCTTTCAACAATTCCAGTCGCGCTTCATGCTGTTGGTGGTGATGATGGGCCCCTTGATATTGGAGTGAGGCTGTACATGAGCTCTTATTTTGGGTGAGTATAGTTTTAAGGTGGAAGGATCCTGTATGCAATCAAAGATTTTTATGTGAAGGATCTGGTGATATCTGTTAATGGAATGCACTTGGCTCCATTGTGGAATAGTGTATAGTTCGACATAGGTTGGAAAATTACATTGTCTAAATTTGCTAATGTTCTATAAACCTGTTTGAAACTAAGATTTGGCAGTAGGTGTGTAGATAAAAAGCAGGAGGTTCTGTTACAGATTTAGCCTCACTGCCTGTTTCTGACAGAGCCTTCTTATAGGAACTGGCGCTTGTTTTTTGTTGGCCCGTTCCTTCTACTTAGTATGTGCACGTATTTGGTTCTCTAATAGAGGCTGAGGGGTCAATACATACTTTCTATTTTGGTTTGACTGCATCCCAATAAGTTTTTTGATATTGGGTGGCCACTTGTACTAGAAATTGGTTTCTGATACATTTTTGTACGTTACTTTCTGACTTTGGTGATCGTTGAAATGGAATAATCTTTTATATTTTATACACTAGCTGTAGTACTGTTATCCCTGATTGATATTTTTGTTTCATTTGGGATTATTTTAATAATTTTATATGCAAGGATACGTGTCTTTTATCAA 4437 0.4075 MRATAVEGSFAEKFDDGEKEKKKRRRSNRRSKQNPPSSSASEVNEAQGVSPDSGKIGTPNQAAASLGSSLKQVNVCASTQQELSKVSNVEFLSMPPMHINEQVEPDDLQIVPMYGGGIDSKSFSESTGYRGSLGVNKNKDPVPYGQIGFCGQKNYFTPHWSIESVEKALEKGDVFKALFHVNAHNRIEVFPNAHLTAYCRIDGVCTDVLIGGIPAQNRAVEGDIVAVKIDPLPLWTKMKGPNGSCNNTATLESCNLLTEDNEVGGNTCKGNDKVDADSESVNCRSYSGQNKQDADQNSYRSCPFPEKTVIYQDNTSRGSINHLVLHGKANHGGINGHHCDAPDSLKSDSCSGQSGVVNAVEKLCLSVDSFPSKRPTGRVMAIIERSPRREGIVGHLNVKQWVSFRDINKKDVKKNKTLISDHEYIQLTPTDSKFPNMRLLVRMLPKCIKKRLKSGDVTIEMDLVAAQIDDWVEESPFPEAHILHVFGRGSEVQTQLDAILFQNAICLSEFPPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSIEKLPNGNYRAGIHIADVSYFVLPDTALDSAAQFRSTSVYMLQRKLPMLPALLSENIGSLSPGVDRLAVSMLVDINPKGDIVDRWIGRTVIHSCCKLSYEHAQDIIDKDFAFESSNFIGDGYPRVYSQFEWPDVINSLKSLYEVSTVLKQKRFTDGALRLENPKIVFLFDDNGIPYGSMLSERKESHFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGQFHYSLEKIREKLKGDPVLHNILISFATRPMQLASYFCSGDLKGSENEWAHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKALQGSKEVKVQKGCFTGINFDKSAAESKEGREALSAAAVKHSVPCAEILADIAAYCNERKLASRNVKDACDKLYTWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEGLTVEWLETTSTLVLSMSTNRCAFRRACPNKWKAFEEVALLTCPCNLDVTMDNSNQSDAMKVDSMSAMDREPISRSGTSETEIDPAVFPLTVRLLSTIPVALHAVGGDDGPLDIGVRLYMSSYFG 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01916 1139 Pfam Dis3-like cold-shock domain 2 (CSD2) 424 503 IPR041505 -
Pste8g01916 1139 Hamap DIS3-like exonuclease 2 [DIS3L2]. 19 1114 IPR028591 GO:0000175|GO:0034427
Pste8g01916 1139 SMART RNB_2 533 887 IPR001900 GO:0003723|GO:0004540
Pste8g01916 1139 SUPERFAMILY Nucleic acid-binding proteins 376 505 IPR012340 -
Pste8g01916 1139 MobiDBLite consensus disorder prediction 1 63 - -
Pste8g01916 1139 SUPERFAMILY Nucleic acid-binding proteins 494 977 IPR012340 -
Pste8g01916 1139 Gene3D - 150 252 - -
Pste8g01916 1139 Pfam RNB domain 533 885 IPR001900 GO:0003723|GO:0004540
Pste8g01916 1139 SUPERFAMILY Nucleic acid-binding proteins 153 385 IPR012340 -
Pste8g01916 1139 ProSitePatterns Ribonuclease II family signature. 854 878 IPR022966 -
Pste8g01916 1139 MobiDBLite consensus disorder prediction 32 63 - -
Pste8g01916 1139 FunFam DIS3-like exonuclease 2 409 491 - -
Pste8g01916 1139 PANTHER RIBONUCLEASE 26 1136 - -
Pste8g01916 1139 FunFam DIS3-like exonuclease 2 146 256 - -
Pste8g01916 1139 Gene3D - 405 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01916 Pste-Chr8 14426842 14433670 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01916 8 14426842 14433670 Pste8g01916 8 14426842 14433670 ECH