Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01899 CACGAATGTCTCTGTTATCATTATTACAACACAAATTCTTTGTTGTAAACATAAACACACAGAGTCCGAGGACCAATATGAAGACTCGTAGCTCTACGAAGATCTCTGCAAAATGGGTTCCTATATTCTCTGTATTTTCCTTCCTTCTTGGAATGCTCATAACAACCAGGATGTGGGAACCACCTGAATCCAACGGGGTGCTTATGTCAAATCACCGACATGAGCAAGAACTGCAAGTGCCGAAGGATAAGGATGTAATGAGTGAAGTGTACAAAACCCATGAGGCCATTCGATCTCTAGACAAGCAAGTTTCTATGCTTCAGATGGAGCTGGCAGCAGCAAGGAGTACTCCAGAACATGAGATCTCGAATGGTTTGGCTAACACCTTGGCCTTGGGGGTCTCTACTGAAGACCCTCCCACGAAGAAGGTGTTTGTAGTGATTGGCATAAACACTGCTTTCAGTAGCAGGAAGAGGCGTGATTCGGTTAGAGAGACTTGGATGCCTCAAGGTGAACAGCTTCTTCAATTGGAACGAGAGAAGGGAATTGTCATCAGATTCATGATTGGTCACAGTGCAACTTCTAACAGCATTCTAGATCGAGCTATTGATTCAGAGGAAGCCCAGCACAAAGACTTCCTTCGCCTGGAACATGTTGAAGGTTATCATGAATTGTCTGCAAAAACAAAAATTTTCTTTTCTACAGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTGCATGTCAATTTAGGTGTTCTTGCAACAACCCTTGCTCGTCACCGTTCAAAACCCAGGGTGTACATTGGATGTATGAAATCTGGACCTGTTCTTTCTCGAAAGGATGTCAAGTATCATGAACCTGAATTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTCCGACATGCAACTGGACAGATATATGCAATCTCCAAGGACCTAGCCACCTACATTTCCATTAACCAGCCAATATTGCACAAATATGCCAATGAAGATGTGTCACTTGGTGCATGGTTCATAGGTCTGGAAGTTGAGCACATAGATGACCGCAGTATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCACAAGCTGGTAACATATGTGTTGCATCCTTTGACTGGAGCTGCAGTGGAATCTGCAAGTCAGTAGAGAAGATCAAATATGTGCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCCTTATTTTAGGTTTGTTGGTTCAACAGAAAGCCAACTAATTCATGTGTTGGCATGTAAGCATACCTTCCAATCTAGTTTTTGGGTGTGGGAGGATATGATGAAATCACTTGGCATTTATGTAAAATAGGCCTCTTTTGTTACATGTATATTTTTGTTCCTTTGACCCCTTTGCACAATGCCTTTGGAGGTAGTTGTGCGAGGTCAATTTTCAGTGTAGCATACTGAAGAGCAATGAAATGAATTGATTGTTGATTTGTTCAATGATAATATGAACTATGAAATCACTTTATTTTTCTCG 1530 0.4222 MSLLSLLQHKFFVVNINTQSPRTNMKTRSSTKISAKWVPIFSVFSFLLGMLITTRMWEPPESNGVLMSNHRHEQELQVPKDKDVMSEVYKTHEAIRSLDKQVSMLQMELAAARSTPEHEISNGLANTLALGVSTEDPPTKKVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01899 411 Coils Coil 95 115 - -
Pste8g01899 411 Gene3D - 132 357 - -
Pste8g01899 411 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 99 352 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste8g01899 411 Pfam Domain of unknown function (DUF4094) 34 114 IPR025298 -
Pste8g01899 411 FunFam Hexosyltransferase 136 357 - -
Pste8g01899 411 Pfam Galactosyltransferase 156 353 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01899 Pste-Chr8 14045655 14049658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01899 25 411 Glycosyltransferase AT1G77810 71.000 0.0 580
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01899 8 14045655 14049658 Pste8g01899 8 14045655 14049658 ECH
Pste8g01899 8 14045655 14049658 Pste2g02909 2 29102074 29107751 PCT