Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01885 TTACGAGCTTTACAAAATGATATTCATGCGAGAATCTGAATATGCTGAGAGGAATCCAAACGCGAGATTGATAAAACTTGGAATTGGTGACACCACAGAGCCAATACCAGATATCATAACTTCAGCTATGGCTGAGCAAGCATTGGCTCTATCAATAGCTCAAGGCTATAAGGGTTATGGACCTGAGCAAGGCAACAGGGAGCTAAAGAGGGCAATAGCAGAAACGTTTTACAAAGATATGCAAGTGAAGGAGAATGAGATATTTGTATCTGATGGAGCACAGTGTGATATTTCTCGCGTTCAGATGCTTCTGGACTCTAGTTTGTCAATAGCAGTGCAGGATCCAACTTTTCCGGCATACATAGATTCAAGCGTGATTGTTGGTAGGGGAGGAACGTTCAAAGCAGAAAGTGGAAAGTACAAAAAGATTGTGTACATGAAGTGTGGAGCTGAGAATAATTTTTTTCCAAACCTATCAACCACTCCAAGGACTGATTTGATTTTCTTTTGCTCTCCAAACAATCCAACTGGCAGTGCTGCATCTCGGCAGCAACTAAAGCAACTTGTGGAATTTGCAAAAGAAAATGGATCTATCATCATCTATGACGCTGCCTATGCTGCTTATATATCAGATGAAAGCCCAAGATCAATTTTTGAAATTCCTGGAGCCAAAGAGGTGGTGGCAATTGAAATTTCATCATTTTCCAAGTTTGCTGGTTTTACTGGTGTCCGGCTTGGATGGACAGTTGTCCCTGAAGAGTTGTTGTATGCAAATGGTTATCCCATCATAAAGGATTATGATCGCATTGTATGCACCTGCTTCAATGGTGCTTCTAATATTGTTCAAGCTGGTGGACTTGCATGCCTTTCCCCACAAGGATTTCAGGCATTGAAAAGAACCATGCGTAACTACATGGAAAATGCGAAGATACTTGTTGACACGTTTGAGTCGCTGGGTCTGAAGGTATATGGTGGCAAAAATGGACCTTATGTGTGGGTGCATTTTCCGGGGCTGAGTTCATGGCAAGTGTTCAACCAAATTCTTGAGAGAGCAGCCATTGTCACTGTCCCTGGTATAGGTTTTGGTCCTGGCGGCGAAGGGTATATTAGACTCAGTGCATTTGGTCACAGAGACAGTGTATTGGAAGCTTCAAGGAGATTGAGAATTTTCAAGTCTGACAGAGCTCAAAGAGTTGATCATCTCACAAAAATCCCTCGGAGTGTCAACATGGAGAGCTTGCAGAATGGTTATTTGTTTCCTGAGATATTCATGCGAGAGTGTCTATATGCCAAGAGGAATCCACATGCAAGATTGATAAGACTTGGCATTGGTGATACTACAGAGCCAATACCAGATATCATCACTTCAGCTATGGCCAAGCAAGCGTTGGCTCTATCAACTGCTCAAGGCTATAAGGGTTATGGACCAGAGCAAGGCAACAGGGAGCTAAAGAGGGCAATAGCGGAAACATTTTACCAAGATATGCAAGTGAAAGAAAATGAGATTTTTGTATCTGATGGTGCACAGTGTGATATTTCTCGCGTTCAGATGCTTCTGGACGATAGTTTGTCAATAGCTGTGCAGGATCCAACTTTTCCGGCATACATAGATTCAAGTATAATTGTTGGTAGGGGTGGACGGTTCAAAGCAGAGAGTGGAAAGTACAAAAAGATTGTGTACATGAAGTGTGGAGCTGAGAATAATTTTTTTCCAAACCTATCAACCACTCCAAGGACTGATTTGATTTTCTTTTGTTCTCCAAACAATCCAACTGGCAGTGCTGCATCTCAGCAGCAACTAAAGCAACTTGTGGAATTTGCAAAAGCAAATGGATCTATCATCATCTATGACGCTGCCTATGCTGCTTATATATCAGATGAAAGCCCAAGATCAATTTTTGAAATTCCTGGAGCCAAAGAGGTGGTGGCAATTGAAATTTCATCATTTTCCAAGTTTGCTGGTTTTACTGGTGTCCGGCTTGGATGGACAGTTGTCCCTGAAGAGTTGTTGTATGCAAATGGTTATCCAATGATAAAGGATTATGATCGCATTGTTTGCACCTGCTTCAATGGTGCTTCCAATATTGTTCAAGCTGGTGGACTTGCATGCCTTACCCCACAAGGATTTCAGGCACTGAAAAGAACCATGCGTTACTACATGGAAAATGCGAAGATTCTTGTTGACACGTTCAAGTCAGTGGGTCTAAAAGTATATGGCGGCAAAAATGGACCTTATGTTTGGGTGCATTTTCCAGGGTTGAGTTCATGGCAAGTGTTCGATCAAATTCTTGAAAGAGCAGCCATTGTCACTGTCCCTGGTACAGGTTTTGGTCCTGCCGGCGAGGGGTATATTAGACTCAGTGCTTTTGGTCACAGAGAATGTGTATTGGAAGCTTCAAGGAGATTGACAAAATTACTA 2419 0.4225 MIFMRESEYAERNPNARLIKLGIGDTTEPIPDIITSAMAEQALALSIAQGYKGYGPEQGNRELKRAIAETFYKDMQVKENEIFVSDGAQCDISRVQMLLDSSLSIAVQDPTFPAYIDSSVIVGRGGTFKAESGKYKKIVYMKCGAENNFFPNLSTTPRTDLIFFCSPNNPTGSAASRQQLKQLVEFAKENGSIIIYDAAYAAYISDESPRSIFEIPGAKEVVAIEISSFSKFAGFTGVRLGWTVVPEELLYANGYPIIKDYDRIVCTCFNGASNIVQAGGLACLSPQGFQALKRTMRNYMENAKILVDTFESLGLKVYGGKNGPYVWVHFPGLSSWQVFNQILERAAIVTVPGIGFGPGGEGYIRLSAFGHRDSVLEASRRLRIFKSDRAQRVDHLTKIPRSVNMESLQNGYLFPEIFMRECLYAKRNPHARLIRLGIGDTTEPIPDIITSAMAKQALALSTAQGYKGYGPEQGNRELKRAIAETFYQDMQVKENEIFVSDGAQCDISRVQMLLDDSLSIAVQDPTFPAYIDSSIIVGRGGRFKAESGKYKKIVYMKCGAENNFFPNLSTTPRTDLIFFCSPNNPTGSAASQQQLKQLVEFAKANGSIIIYDAAYAAYISDESPRSIFEIPGAKEVVAIEISSFSKFAGFTGVRLGWTVVPEELLYANGYPMIKDYDRIVCTCFNGASNIVQAGGLACLTPQGFQALKRTMRYYMENAKILVDTFKSVGLKVYGGKNGPYVWVHFPGLSSWQVFDQILERAAIVTVPGTGFGPAGEGYIRLSAFGHRECVLEASRRLTKLL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01885 801 CDD AAT_like 434 797 - -
Pste8g01885 801 SUPERFAMILY PLP-dependent transferases 413 797 IPR015424 -
Pste8g01885 801 PANTHER AMINOTRANSFERASE 389 800 IPR019942 GO:0008483
Pste8g01885 801 SUPERFAMILY PLP-dependent transferases 4 382 IPR015424 -
Pste8g01885 801 FunFam LL-diaminopimelate aminotransferase, chloroplastic 28 285 - -
Pste8g01885 801 NCBIfam LL-diaminopimelate aminotransferase 5 383 IPR019942 GO:0008483
Pste8g01885 801 NCBIfam LL-diaminopimelate aminotransferase 402 799 IPR019942 GO:0008483
Pste8g01885 801 Gene3D Aspartate Aminotransferase, domain 1 413 797 IPR015422 GO:0003824
Pste8g01885 801 Gene3D - 443 701 IPR015421 GO:0003824
Pste8g01885 801 Gene3D - 28 286 IPR015421 GO:0003824
Pste8g01885 801 Gene3D Aspartate Aminotransferase, domain 1 4 382 IPR015422 GO:0003824
Pste8g01885 801 FunFam LL-diaminopimelate aminotransferase, chloroplastic 443 701 - -
Pste8g01885 801 Pfam Aminotransferase class I and II 433 783 IPR004839 GO:0009058|GO:0030170
Pste8g01885 801 Pfam Aminotransferase class I and II 18 376 IPR004839 GO:0009058|GO:0030170
Pste8g01885 801 CDD AAT_like 19 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01885 Pste-Chr8 13805313 13817712 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01885 8 13805313 13817712 Pste8g01885 8 13805313 13817712 ECH