Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01882 CGATTTCTTTGTCACACTGACTCACATACCAAACCAGAGTGACAGAGGAAAGAAGCAACGGACGCTTATGGGTTCTTTGTTTAGTATGGCTAATACCAAGACCAATCAGAGCGAGCCTAGTGAAATTTCTCCAAATGAAACCTGCAAGAGGCAAAGATTGTCAACTTCCTCCAATGAAGAATGTCCAAGACTTATTCCTAATCTCCCTGATGAGTTATCGCTTCAGATTATTGCTAGACTTCCTAGAATTTGTTACCAGCATGTAAAGCTGGTGTCTAGGAGATGGAAAGCAACTGTCATGAGTTCAGAATTATATAAAGTAAGAAAGGAGCTTGGAACAACTGAAGAGTGGCTATACTTGTTGGTTAGGGTTGGAGAAAATAAACTCTTATGGCATGCTCTAGATCCGCGTTCTCGAATTTGGCAGAGGCTTCCTATTATGCCCAGCATTGTCGATGAAGAAGATTCCCAAAAGAGTTCTTCTAGGCTTTGGATGTGGAACATGGTAGAAGGTATCAGAATTGCTGAAATTATTAGAGGTCTGCTTGGACAGAAAGACGCATTGGATGACATGCCTTATTGCGGTTGTGCTTTTGGAGCTGTTGATGGATGTCTTTATGTTCTAGGTGGATTCTCTAAAGCTTCAACTATGAAATGTGTCTGGCGATTTGATCCGATACAAAATGTGTGGAAGAAAGTGAATTCTATGTCTACGGGTAGGGCGTACTGTAAGACAGGCATCTTAAATAACAAGCTTTATGTAGTTGGAGGGGTTAGTCAAGGACAAGCTGGACTGATTCCTCTTCAATCTGCTGAAGTTTTTGACCCTTTCACAGATACATGGTCTGATGTACCTAGTATGCCATTCTCAAAAGCCGGAGTCCTGCCCACAGCTTTTTTGGCTGACATGTTAAAGCCTATTGCTACTGGTTTAACCTCATACAATGGAAGGTTATATGTTCCCCAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATATATGATCCTGAAACAAATAAATGGATGGAAATGCCAAATGGAATGGGTGAGGGGTGGCCCATTAAGCAGGCAGGAACAAAATTGAGTGTTGTGGTGAATGGTGAATTATATGCTTTTGATCCTTCTAATTCTGTGGATAGTGGAAGGATCAAGGTATATGATCAGGGAGAGGATGCATGGAAAGTTGTAATTGGAAAAGTTCCTGCATATGATTATACAGATTCGGAGTCTCCATATCTACTAGCCGGTTTCCATGGAAAGCTTCATTTCATTACAAAAGATGCCAATCGTGATATTTCTGTTCTGCAGGCTGATTTGTGCAGTAATTTAGATTCTTCACCATCAACCTCAACACCTTCATCGCCCAAATCCATGGAGGATGAATTGTGGCAAGAATCCGCCCAAACAGACGCAGCTGTTTGGAAAGTAGTTGCCAACAGGGGTTTTGGACATGCTGAACTGATCAATTGCCAAATGGATACCAGGCATTTGATAGCCAAGATGTCTGTTTATCGTAAATACTCAAATTTATCACAAGCAGAATTGTATCAAACAATTCACTCTGTAGTAGAAATAACATTTAAAAGTTCAAGTAATGAGAAA 1615 0.4068 MGSLFSMANTKTNQSEPSEISPNETCKRQRLSTSSNEECPRLIPNLPDELSLQIIARLPRICYQHVKLVSRRWKATVMSSELYKVRKELGTTEEWLYLLVRVGENKLLWHALDPRSRIWQRLPIMPSIVDEEDSQKSSSRLWMWNMVEGIRIAEIIRGLLGQKDALDDMPYCGCAFGAVDGCLYVLGGFSKASTMKCVWRFDPIQNVWKKVNSMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPFTDTWSDVPSMPFSKAGVLPTAFLADMLKPIATGLTSYNGRLYVPQSLYSWPFFVDVGGEIYDPETNKWMEMPNGMGEGWPIKQAGTKLSVVVNGELYAFDPSNSVDSGRIKVYDQGEDAWKVVIGKVPAYDYTDSESPYLLAGFHGKLHFITKDANRDISVLQADLCSNLDSSPSTSTPSSPKSMEDELWQESAQTDAAVWKVVANRGFGHAELINCQMDTRHLIAKMSVYRKYSNLSQAELYQTIHSVVEITFKSSSNEK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01882 516 PANTHER OS02G0202900 PROTEIN 16 474 IPR045887 -
Pste8g01882 516 SUPERFAMILY F-box domain 42 85 IPR036047 GO:0005515
Pste8g01882 516 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Pste8g01882 516 MobiDBLite consensus disorder prediction 425 444 - -
Pste8g01882 516 MobiDBLite consensus disorder prediction 1 34 - -
Pste8g01882 516 Gene3D - 102 384 IPR015915 GO:0005515
Pste8g01882 516 SMART fbox_2 46 86 IPR001810 GO:0005515
Pste8g01882 516 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Pste8g01882 516 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Pste8g01882 516 SUPERFAMILY Kelch motif 97 383 IPR015915 GO:0005515
Pste8g01882 516 SMART kelc_smart 229 279 IPR006652 GO:0005515
Pste8g01882 516 SMART kelc_smart 182 228 IPR006652 GO:0005515
Pste8g01882 516 CDD F-box_AtAFR-like 42 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01882 Pste-Chr8 13774110 13777191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01882 46 270 Miscellaneous Gene Families AT4G33900 25.541 1.30e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01882 8 13774110 13777191 Pste8g01882 8 13774110 13777191 ECH