Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01868 CAAATAACAAATATCGGAATCATTCACATTCACATTAACATTAACAATCGCTATCTCCCAAATACCATTTCTGTTTATCATTCACCATAGCGACACAGTTGACTTTTATCCAATTTCCTCGTCGTACGCATCGTTCCTAATCCACCTCCGACACAATCGCTGCCGCCACTGAGTATTCAATCTTGACCTTTTAGAGAGAGGGTCTACCAGACCAGCATGAGTGTGGATCCAAAGAAAACTGCCTCTAATGGCCAGGAGAAAATGTTAACATCACAAGAACAGCAGGTGTTGATTAATGAGGTGAGAAGGTTAATTGGGCCACAGTCTGGTAAGGCATCCATTTTTTGTTCCGATGCATCCATCTCAAGGTATTTAAGAGCACGAAATTGGAACGTCAAGAAGGCAACTAAAATGTTGAAGCTGAGCCTGAAATGGAGAGCAGAATACAAACCAGAAGAAATCCGCTGGGAAGATGTTGCTCATGAAGCAGAGACAGGAAAAATTTATAGATCAAATTATATTGACAAGTATGGGAGAACAGTTCTAGTAATGAGACCTAGTTGCCAGAACTCGAAGTCAACAAAAGGACAAATTAAATATTTGGTATACTGCATGGAGAATGCTATTTTAAATCTTCCACCAGAGCAGGAACAGATGGTGTGGTTGATTGACTTCCAGGGTTTCAACATGTCACATATATCAATAAAGGTGACACGTGAAACTGCCCATGTATTACAAGAACATTATCCTGAACGGCTGGGTCTGGCAATACTGTACAATGCACCTAAGTTCTTTGAGCCATTCTTCACGATGGTAAAGCCGTTATTAGAGCCTAAGACTTATAATAAGGTCAAGTTTGGTTACTCTGATGATCAGAACACCAAGAAGATTATGGAGGATTTGTTTGATTTTGACCATCTTGAATCTGCATTTGGTGGGAATGATGATAGAGGATTTGACATAAGTAAATATGCTGACAGAATGAAAGAGGATGACAAGAAGATTCCTGCTTTCTGGACTAGGGAAAACACTGTATCATCAGTCCCAAATCATGTTCCTTCTTTAGATTCAACTAGATTAGACTCAGATACTGATGCTTCAGACAATGAGAAAATAGACTCTTCCCCTGACCCTGTGATGGATACAGATATCACTAACCCAGATCAGAAAAGCTTGGTTAATGAAGGAGAAAGAAATGCTAGTGCAGGTGTGCATTAGAATGAGAAATTGCATACCTCGGGCGGTCGGGCCTTTGAAGTAATTAATATACAGGCACTGAGTTAGCAACATTCTGTGACATTCTTGTTTTAAACTTAACTCAAGATACCTTTTGTTACTTGATATTGGATTTAACATGATCCCAGATGTTTTTGCCCTGTGAATTCTTGCTTTTATCCTATAAACGGGCATGGAATGTCTGCTTTTGTGCATTCAGCAATATTTTGCTGCTGTTGTGGTAGACAACTTTTTTCCTCCCTAGTGGATGGAAGAGTGATTGTAGTTATCTAAAATAGTTGAATTCTTGGCTAG 1530 0.3941 MSVDPKKTASNGQEKMLTSQEQQVLINEVRRLIGPQSGKASIFCSDASISRYLRARNWNVKKATKMLKLSLKWRAEYKPEEIRWEDVAHEAETGKIYRSNYIDKYGRTVLVMRPSCQNSKSTKGQIKYLVYCMENAILNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFTMVKPLLEPKTYNKVKFGYSDDQNTKKIMEDLFDFDHLESAFGGNDDRGFDISKYADRMKEDDKKIPAFWTRENTVSSVPNHVPSLDSTRLDSDTDASDNEKIDSSPDPVMDTDITNPDQKSLVNEGERNASAGVH 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01868 333 PANTHER GH16843P 5 273 - -
Pste8g01868 333 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Pste8g01868 333 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Pste8g01868 333 SMART sec14_4 90 244 IPR001251 -
Pste8g01868 333 MobiDBLite consensus disorder prediction 274 288 - -
Pste8g01868 333 MobiDBLite consensus disorder prediction 289 305 - -
Pste8g01868 333 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Pste8g01868 333 MobiDBLite consensus disorder prediction 274 333 - -
Pste8g01868 333 CDD SEC14 92 242 IPR001251 -
Pste8g01868 333 Gene3D - 2 275 IPR036865 -
Pste8g01868 333 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Pste8g01868 333 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Pste8g01868 333 MobiDBLite consensus disorder prediction 307 324 - -
Pste8g01868 333 FunFam Phosphatidylinositol transfer protein 3 5 276 - -
Pste8g01868 333 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01868 Pste-Chr8 13537904 13543979 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01868 8 13537904 13543979 Pste8g01868 8 13537904 13543979 ECH
Pste8g01868 8 13537904 13543979 Pste2g02838 2 28414205 28416071 PCT