Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01867 GTTTTGTTCCCTTCCTCTTTATAACCTTTTCACGCTCTCTTTACCAATCTGTGCATTTTCCCAGAGCAGCATGGCTCTTTCTGAGTCTCCGATTACCACCATCACTTTAATCATCTCTTTCCTTCTCCTCACTCTCCACCACGCCGAGTCAACTCAGCCTCCATATTCCTGTGACTCGTCCTCCAACTCACCCTACCCATTCTGCAACACCAAGCTCCCCATCAGCAAAAGGGCCCAAGACCTGGTCTCGAGACTCACTCTCGACGAGAAACTCGCCCAACTCATCAACACAGCACCGGCGATTCCCCGACTCGGCATCCCGAGTTACCAATGGTGGAGCGAAGCCTTGCACGGCGTCGCCGACGTAGGCTTCGGAATCAGATTCAACGGAAGTATCAAGTCAGCCACGAGCTTCCCTCAAGTCATTCTCACCGCAGCTTCCTTCGACCAAAACCTCTGGTACCAGATTAGCAAGGCTATTGGGACAGAAGCGAGGGGTGTGTACAATGCGGGGCAAGCAACAGGGATGACATTTTGGGCTCCGAACATAAACATTTTCAGGGATCCACGGTGGGGGAGAGGGCAAGAGACAGCAGGGGAAGACCCTCTGATGAATGCTAAGTATGGTGTGGCTTATGTAAGGGGCCTTCAAGGGGATTCCTTCGAAGGAGGGAAACTTGGAGAAAGGCTTCAAGCTTCGGCGTGTTGCAAGCACTTCACTGCCTATGATTTGGACCATTGGAAGGGGATCGATCGCTTTGTCTTCGATGCTCATGTCTCATTGCAAGATTTGGCAGACACATACCAACCTCCATTTCATAGTTGCATAGAGCAAGGTCGAGCCAGTGGAATAATGTGTGCTTACAACCGAGTCAACGGGGTTCCAAACTGTGCTGATTTCAATCTATTAACAAATATTGCAAGAAAACAATGGAAATTCGATGGGTATATTACGTCAGATTGTGAAGCAGTTGCTATCATACACGATGAGCAAGGTTATGCAAAAACAGCAGAGGACGCTATAGCCGATGTCTTTAGGGCAGGGATGGATGTAGAGTGTGGCAATTACATAAGCAAGCATGCAAAATCAGCAGTGTTACAAAAAAAATTGGCCATATCACAAATCGACCGTGCCCTTCAGAACCTCTTCTCCATAAGAATGAGACTAGGCCTATTCGACGGAAACCCAAGGAAGCTTCAATATGGAACAATTGGTCCCAACGAAGTGTGTTCCAAAGAGCACCTCCTACTAGCACTAGAAGCAGCAAGAGAGGGCATAGTCCTTCTAAAGAACAGCAACTCACTACTACCACTTCCAAAGACAAAGCCCAGTGTTGCAATTATAGGCCCCAATGCCAATGCCTCATCACTAGTTGTCCTAGGAAACTATCATGGTCGTCCTTGCAAATTGGTGACACTTTTGCAAGGTTTTGGTGGGTATGCTAAGGACACCACTTATCACCCTGGGTGTGATGATGGGCCACAATGTGAGTCTGCTAGGATAGAAGAGGCTGTGGAGGTTGCTAAAAAGGTGGATTATGTGGTGATGGTTATGGGGTTGGATCAGAGTCAAGAGAGGGAGTCACATGATCGTGAGTATTTGGGGCTGCCAGGGAACCAGGAAGAGTTAATTACGAGTGTTGCTAAGGCTTCTAAGAGACCTGTTGTTTTGGTAATCTTGTGTGGAGGCCCAGTGGATATCACTTCAGCCAAGTTTGATGATAGAGTTGGAGGGATCTTGTGGGCTGGGTACCCTGGGGAACTTGGGGGACTGGCTCTGGCCCAGGTTATCTTTGGTGATCATAACCCAGGGGGGAGACTACCAATTACTTGGTACCCAAAAGATTTCATCAGAGTACCAATGACAGATATGAGAATGAGAGCTAATCCAGCACAAGGCTACCCTGGGAGAACCTATAGATTTTACACTGGTCCAAAGGTCTATGAATTTGGCTATGGCCTAAGCTACACAAACTATTCCTACAAGTTCCTATCACTCTCACACAACACCCTCCACATCAACCACTCATCCACCCATTTGATGGCTGAAAATTCTGAAACCATACGTTACAAACTGGTATCAGAGTTGGGACAAGAAACATGTCAAACCATGTCTGTGTCAGTCACTTTGGGAGTCACAAATCATGGTAACATGCCCGGGAAGCATCCTGTGTTGCTGTTTTTGAAGCAGGGAAAAGTGAGAAATGGGAATCCGGTGAAACAGTTGGTGGGGTTTCAAAGTGTGAAGTTGAATGCAGGGGAAACGGCTCAAGTGGGATTTGAGCTAAGCCCTTGTGAGCATCTTAGCACAGCAAATGAGGCTGGTTCTATGGTGATTGAAGATGGGTCTTATTTGTTGCTTGTGGGAGACCAAGAGTACCCACTAAAAATCACAGTTTGATGCAGTGATTGGAGTATTAATTCAATCAAATCAAGTCATGCCTTAAGTGAATAAAAAACTAATTTGCAACTTGTTCATCACATTATTTTCAGTATGTTACATCTGAATAGAGGTTTTAGTGTGAAACATTGATTCAGAAATTATACGTGGTGATCAGCAACTTAATGCTGGTGGAGAGACTTCAAAGTTCAAAGTGTTAAGGAACTTTCTTGAATGAATTCGTAGATTTCGCTTCTGGTTACTTAGCATTGTTATTTACGTGTAAAAGTTTGTCCTATTATGGCATCCGACAAAAAAACAAGCACTTTATCTTCTTTGATTGTC 2725 0.4565 MALSESPITTITLIISFLLLTLHHAESTQPPYSCDSSSNSPYPFCNTKLPISKRAQDLVSRLTLDEKLAQLINTAPAIPRLGIPSYQWWSEALHGVADVGFGIRFNGSIKSATSFPQVILTAASFDQNLWYQISKAIGTEARGVYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPLMNAKYGVAYVRGLQGDSFEGGKLGERLQASACCKHFTAYDLDHWKGIDRFVFDAHVSLQDLADTYQPPFHSCIEQGRASGIMCAYNRVNGVPNCADFNLLTNIARKQWKFDGYITSDCEAVAIIHDEQGYAKTAEDAIADVFRAGMDVECGNYISKHAKSAVLQKKLAISQIDRALQNLFSIRMRLGLFDGNPRKLQYGTIGPNEVCSKEHLLLALEAAREGIVLLKNSNSLLPLPKTKPSVAIIGPNANASSLVVLGNYHGRPCKLVTLLQGFGGYAKDTTYHPGCDDGPQCESARIEEAVEVAKKVDYVVMVMGLDQSQERESHDREYLGLPGNQEELITSVAKASKRPVVLVILCGGPVDITSAKFDDRVGGILWAGYPGELGGLALAQVIFGDHNPGGRLPITWYPKDFIRVPMTDMRMRANPAQGYPGRTYRFYTGPKVYEFGYGLSYTNYSYKFLSLSHNTLHINHSSTHLMAENSETIRYKLVSELGQETCQTMSVSVTLGVTNHGNMPGKHPVLLFLKQGKVRNGNPVKQLVGFQSVKLNAGETAQVGFELSPCEHLSTANEAGSMVIEDGSYLLLVGDQEYPLKITV 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01867 776 SUPERFAMILY (Trans)glycosidases 42 402 IPR017853 -
Pste8g01867 776 FunFam probable beta-D-xylosidase 2 388 634 - -
Pste8g01867 776 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 636 IPR036881 GO:0004553|GO:0005975
Pste8g01867 776 Gene3D - 388 633 IPR036881 GO:0004553|GO:0005975
Pste8g01867 776 FunFam probable beta-D-xylosidase 7 54 375 - -
Pste8g01867 776 Pfam Glycosyl hydrolase family 3 N terminal domain 108 359 IPR001764 GO:0004553|GO:0005975
Pste8g01867 776 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 633 IPR002772 GO:0004553|GO:0005975
Pste8g01867 776 PANTHER SUGAR HYDROLASE-RELATED 24 772 IPR044993 GO:0009044|GO:0045493
Pste8g01867 776 Gene3D Immunoglobulins 634 776 IPR013783 -
Pste8g01867 776 SMART Fn3_like_2 699 769 IPR026891 -
Pste8g01867 776 Gene3D - 54 377 IPR036962 GO:0004553|GO:0005975
Pste8g01867 776 PRINTS Glycosyl hydrolase family 3 signature 115 134 IPR001764 GO:0004553|GO:0005975
Pste8g01867 776 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Pste8g01867 776 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Pste8g01867 776 Pfam Fibronectin type III-like domain 701 768 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01867 Pste-Chr8 13519474 13525321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01867 20 776 Glycoside Hydrolase AT1G78060 63.434 0.0 1006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01867 8 13519474 13525321 Pste8g01867 8 13519474 13525321 ECH
Pste8g01867 8 13519474 13525321 Pste2g02831 2 28380208 28381347 PCT