Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01858 CCATGGAAATGAAGGCAAAGAACAACAAGAAGGTGGGGAGTGAATTGGGTTGTGGTCTCATGGAGAGAATTCTCCACCTCAAAAGCCACAAGCTGAGAAAAGCTGCTGTTCACTCCCTGCCCTTGAAGAATGCACTAAGTGATGATGATGGAAAAAGTGAAGAATCCAAGAAGTCCCCAAATGAAGAATCAAAGGCTGTAAGAAAAGGTTGCACTGACACTGAACCACAAAAACTGAGTGCAGAACAGAAACCTGCCAGAAAGAGTGCATCTATTCACCACCAACAACCTTGTACATATCGAAACAATCATAATCACAGGCATTCAGATGTTGCAAGAAACTCAACATCGTCGTCCACTAGTAGTTCAATTTCATCTCACACAAAGGTTCAGGAAAACAAGGACAAGAATCATGAGAGCAAGCCACATGGAGACCCCACTGGAAATTCACTAGCACTTGCTAGGATAAGTACTAGTCACCAGCGAGACAATGAGCACACAGACTTTGGTGCCTTGAAAATCACTGGTAATTTGCTTTTAAATAACACCCCAAGAAGGAAGAGTGTGGAATACACGCCTAAGAAAGCAGAGTTGAACACTGTGCCTAGTTCTTACACCAATGCAAGCAAAGGCTTGATGGGGAATATCATTAGGAGGAACAGCAATGGCAATGAGGCAGCACAGTTTTTTAGTCCAAGGCTGAATAAAATGGATCCTGAGGTGTTGAAAACCATGGGAAATGAAGCATACAAGCAGGGGAGATTTGAAGAGGCTTTGGCTTTGTATGACCAAGCCATTGTACTTGATTCAAGTAAGGCAACGTATCATTGCAACAAGAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAGGAAGCAATTGTTGAGTGTGAGGAATCTATTAAGCTGGACCCTTCCTATGTCAGAGCCTACAACCGTTTGGCCACAATATATTTCAGGTTGGGAGAAGCAGAAAAGGCACTGGATTGCAATCAGTCAACCTCGTATGTTGATTCAACACTTGCTTTCCAAGCACAGGCTCTTCAAAATCACCTTAACACATGCATAGAAGCACGGAAAGTCAATGCCTGGAGTGATATATTAAAGGAAACACAGTCTGCAATATCCTTAGGTGCTGATTCAGCTCCACAGGTCTATGCTTTACAAACTGAAGCCTTGCTGAAGCTCCTAAGATATCAAGAGGCCTATGTCATCTACGATAAAATGCCAAAATTTTCACTTGATTGGTGTACCAAGATATTTGGTAAAGCTCGCAGCGCTTACCTGTTGACGATAGCCTCAATGGTTTACTTGGCATCTGGCAGGTTTGAGGAAGCTGTGACAGCAGCTCAGCAAGCAGCTAAAGTTGATCCAGGCAATAGAGAGGTGAACACAGTGGTAAGGAGGGCCAGAGCAGCAACATCAGCCAGAATGAGTGGAAACTTGCTCTTCAAGGCATCAAAAGTGACTGAAGCATGTGCCGTGTACAACGAAGGACTAGAACATGATCCACACAACTCAGTTCTGTTATGCAACAGAGCAGCATGCCGCTCTAAGCTTGGCCAATATGAGAAAGCAATTGAAGACTGTAATGCGGCACTTACGGTTCAGCCAGGTTATAGCAAAGCAAGGTTAAGGAGGGCAGATTGCAATGCCAAGTTGGAACGATGGGAAGCTGCTATTCAAGACTATGAAATGCTATTAAGAGAAAGGCCAGGGGATGAGGAAGTCGCAAGGGCATTGTTTGAAGCTCAACTTCAACTCAAAATGCTGCATGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAATTTGGTTTTCATCTCAAGTAATGATCGGTTCAGACATTATGTAACCTCACCCGGTATGGCTGTGGTGCTCTTTAGCAACAAGGCAACTCACAAGAAAGTGTTACTTATGTTGGAGCAAACGAGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTTGAGATTGAAGATCACCCCTACTTAGCAAAGTCAGAAGGTGTGAGCTCCATCCCAGCCTTCAAAATATACAAGAACGGATCAAGAGTTAAAGAAATTTCAGGCAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTGTATAGCAGCAGC 2114 0.4338 MEMKAKNNKKVGSELGCGLMERILHLKSHKLRKAAVHSLPLKNALSDDDGKSEESKKSPNEESKAVRKGCTDTEPQKLSAEQKPARKSASIHHQQPCTYRNNHNHRHSDVARNSTSSSTSSSISSHTKVQENKDKNHESKPHGDPTGNSLALARISTSHQRDNEHTDFGALKITGNLLLNNTPRRKSVEYTPKKAELNTVPSSYTNASKGLMGNIIRRNSNGNEAAQFFSPRLNKMDPEVLKTMGNEAYKQGRFEEALALYDQAIVLDSSKATYHCNKSAALIGLGRLQEAIVECEESIKLDPSYVRAYNRLATIYFRLGEAEKALDCNQSTSYVDSTLAFQAQALQNHLNTCIEARKVNAWSDILKETQSAISLGADSAPQVYALQTEALLKLLRYQEAYVIYDKMPKFSLDWCTKIFGKARSAYLLTIASMVYLASGRFEEAVTAAQQAAKVDPGNREVNTVVRRARAATSARMSGNLLFKASKVTEACAVYNEGLEHDPHNSVLLCNRAACRSKLGQYEKAIEDCNAALTVQPGYSKARLRRADCNAKLERWEAAIQDYEMLLRERPGDEEVARALFEAQLQLKMLHGEDIKDLKFGSNLVFISSNDRFRHYVTSPGMAVVLFSNKATHKKVLLMLEQTSKRFPSVNFLKVEIEDHPYLAKSEGVSSIPAFKIYKNGSRVKEISGNNHELLERSVKLYSSS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01858 704 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Pste8g01858 704 MobiDBLite consensus disorder prediction 38 150 - -
Pste8g01858 704 Coils Coil 545 565 - -
Pste8g01858 704 Pfam TPR repeat 245 277 - -
Pste8g01858 704 Pfam Tetratricopeptide repeat 541 571 IPR019734 GO:0005515
Pste8g01858 704 MobiDBLite consensus disorder prediction 111 127 - -
Pste8g01858 704 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Pste8g01858 704 MobiDBLite consensus disorder prediction 128 142 - -
Pste8g01858 704 CDD TRX_family 612 690 - -
Pste8g01858 704 Gene3D Tetratricopeptide repeat domain 237 590 IPR011990 GO:0005515
Pste8g01858 704 MobiDBLite consensus disorder prediction 44 71 - -
Pste8g01858 704 Pfam Tetratricopeptide repeat 295 326 - -
Pste8g01858 704 SUPERFAMILY TPR-like 475 587 IPR011990 GO:0005515
Pste8g01858 704 SMART tpr_5 471 504 IPR019734 GO:0005515
Pste8g01858 704 SMART tpr_5 505 538 IPR019734 GO:0005515
Pste8g01858 704 SMART tpr_5 539 572 IPR019734 GO:0005515
Pste8g01858 704 SMART tpr_5 306 339 IPR019734 GO:0005515
Pste8g01858 704 SMART tpr_5 238 271 IPR019734 GO:0005515
Pste8g01858 704 SMART tpr_5 425 458 IPR019734 GO:0005515
Pste8g01858 704 SMART tpr_5 272 305 IPR019734 GO:0005515
Pste8g01858 704 Pfam Tetratricopeptide repeat 507 538 IPR001440 GO:0005515
Pste8g01858 704 Pfam Tetratricopeptide repeat 434 504 - -
Pste8g01858 704 Gene3D Glutaredoxin 598 703 - -
Pste8g01858 704 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 3 699 IPR044534 -
Pste8g01858 704 Pfam Thioredoxin 633 694 IPR013766 -
Pste8g01858 704 SUPERFAMILY TPR-like 238 460 IPR011990 GO:0005515
Pste8g01858 704 SUPERFAMILY Thioredoxin-like 589 695 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01858 Pste-Chr8 13354068 13357352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01858 223 541 Glycosyltransferase AT3G04240 21.296 2.47e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01858 8 13354068 13357352 Pste2g02800 2 28014427 28017962 PCT