Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01846 GTCACTTGGATAGAAATGGAAGAAACTAGAGACGTAGATGTGATTTGTTTTGTTGCATAGGATAATAGAAATACGAAAATCTACGTGACATAAAAAAGGTGTGGTTGCGGTTTGCCTATCAATTCATTGTATCCCCACTCAGTTGGCCAATCCTCTTCACTTGTTCTTCTTCACATCTCATCTCTCTCTCTCTACTTGGACCCTCTCCTCAGTGTGTCTTCTCTCTGGTTGCAACTTGGCTGTGTGACAGGACCAAAATACGAATTTTCTGGAAAAGAAATCAATCCCCCCTCCCAAAAGAAATGCTAAAGTGTGGGAGAAAGAGGAATTAAAAGTTGTGTTCTCAAATATCAGGTTGTGCTTTTTACCTCCCTATTGCCTAAAACCTCCCTCAGTAAGACCATAAGGAATAAAAAAAGGAAGAGAGAGAAGGGAAGACTGGTTAGCATTTCTTGGAGTTGTTCTTGAGGCTCAGTGGTCAAAGGGATAGGAGGAAGGAAAGAGATCTGGTATATGGTTAACAAAGAGGTTGTATGTGTGTGTGTGAATAGTAGAGGTCTTGAGGTTGTGGTGTTGGTGAATAATATTTGTAGAGATGTCAGGTGGAGGATGCAGCATAGTGTGGTTCAGGAGAGATCTGAGGGTGGAGGATAACCCTGCACTGGCTGCAGGAGTGAGAGCAGGTGCTGTGGTTGCTGTTTTCGTTTGGGCTCCTGAAGAAGAGGGTCAATACTACCCTGGCAGGGTCTCTAGGTGGTGGCTCAAACAAAGTTTGGCTCATCTTGATTCCTCTTTGAGAAGCCTTGGCACCCCTTTAATCACCAAGCGTTCTACTAATAGTGTTTCTTCTCTCTTGGAGGTTGTCAAGTCCACTGGGGCTACTCAACTCTTTTTCAACCATCTATATGATCCATTGTCACTGGTTAGGGATCACCGAGCAAAGGAGGTTCTGACTGCTCAAGGCATTACCGTACGATCATTCAACTCAGACTTGTTGTATGAACCATGGGATGTGAATGATGCTCATGGCCAACCATTTACAACTTTTTCTGCTTTTTGGGAAAGATGCCTAAGCATGCCTTATGACCCACAAGCACCTCTTCTCCCACCTAAAAGGATTATTCCAGGTGATGTATCAAGGTGCCCATCGGATACATTGGTGTTTGAAGATGAATCAGAGAAAGCAAGCAATGCGCTTCTTGCTAGAGCATGGTCACCGGGGTGGAGCAATGCTGATAAGGCATTGACAGCATTCATAAACGGTGCACTGATTGAATACTCAAAGAATCGCAGGAAGGCTGATAGTGCCACAACCTCATTTCTCTCACCGCATTTGCATTTTGGTGAGGTGAGTGTGAAGAAAGCGTTCCACCTTGTCCGCATTAAGCAAGTGTTTTGGGCTAATGAAGGAAACAAGGCTGGTGAAGAGAGTGTGAACTTGTTTCTTAAGTCTATAGGTCTCAGAGAGTATTCAAGGTACATTAGTTTCAACCACCCCTATAGTCATGAAAGACCCCTTCTAGGCCACCTTAAGTTTTTCCCTTGGGTGGTGAACGAAGGGTACTTTAAGGCTTGGAGACAAGGCAGAACAGGGTACCCTTTGGTGGATGCTGGAATGAGAGAGTTGTGGGCAACTGGTTGGTTGCATGATCGGATACGTGTTGTGGTTTCCAGTTTCTTTGTGAAGGTGCTGCAACTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACACTTTTGGATGCAGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATATCTGGTACTCTCCCTGATGGTCGTGAATTTGACCGAATAGATAATCCACAGTCTTGGATTGTTCTCTACACCATTGATTTTTTCCAGAGAAATGAAACCGGCAGTATTTCCACCCTCTTCTCTGAATTACGTCAAATGTCGCTATTGGAGAAGCTTCACTTGTCTGATCTGTTTGAGGGGTATAAATGTGACCCAAATGGAGAATATGTACGACGCTGGCTCCCTGAACTTGCTAGATTACCAACTGAATGGATACACCATCCATGGAATGCACCAGAGTCTGTACTCCAAGCTGCTGGAATTGAACTTGGTTCAAATTATCCTCTTCCCATTGTAGGAATAGATGAAGCAAAGGAAAGACTGCAAGAAGCGCTTATACAAATGTGGCAACAAGAAGCAGCTTCAAGAGCTGCAGTAGAAAATGGAACCGAGGAAGGCCTTGGAGACTCATCTGAATCAACCCCTATTGCTTTTCCTCAAGATATACAAATGGAGGAAAGGCCTGAACCTGTTAGGAACAATGCGCCTCAGGGTACTCGGCGCTACATGGATCAGATGGTTCCAAGTATCACTTCTTCCCATGTGAGAGTGGAAGAGGAAGAAACATCTTCATACCTTCGAAATTCAGCCGCAGACAGCAGAGCTGAAGTGCCTATAACTGTGACAACACAACAAAATGCAAGAGAGACAGTGAATCAAGGAGCGTTGCTAAATATGAATAGGAACACTCGAGTACAGAACAATGCTGCAATGTGGCTGAGAAACGCAGCTGAAGATTCCACAGCAGAATCTTCAAGTAGTACTAGGAGAGAAAGGGATGGGGGTGTAGTTCCAGTATGGTCTCCCCCAGCTTCTAACTTCTCAGAACAATTTGTAGATGATGAAAATGGTATAGGAGCCAGTTCATCTTACTTGCAAAGGCAGCATCCTCAGTCTCATCAATTGATGAACTGGACACGGCTACCTCAGACTGGGTGA 2761 0.4451 MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGQYYPGRVSRWWLKQSLAHLDSSLRSLGTPLITKRSTNSVSSLLEVVKSTGATQLFFNHLYDPLSLVRDHRAKEVLTAQGITVRSFNSDLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPQAPLLPPKRIIPGDVSRCPSDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGALIEYSKNRRKADSATTSFLSPHLHFGEVSVKKAFHLVRIKQVFWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQSWIVLYTIDFFQRNETGSISTLFSELRQMSLLEKLHLSDLFEGYKCDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDEAKERLQEALIQMWQQEAASRAAVENGTEEGLGDSSESTPIAFPQDIQMEERPEPVRNNAPQGTRRYMDQMVPSITSSHVRVEEEETSSYLRNSAADSRAEVPITVTTQQNARETVNQGALLNMNRNTRVQNNAAMWLRNAAEDSTAESSSSTRRERDGGVVPVWSPPASNFSEQFVDDENGIGASSSYLQRQHPQSHQLMNWTRLPQTG 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01846 721 NCBIfam cryptochrome photoreceptor 6 413 IPR014134 GO:0009785|GO:0009882
Pste8g01846 721 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 301 542 - -
Pste8g01846 721 PANTHER CRYPTOCHROME 6 414 IPR002081 -
Pste8g01846 721 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 194 416 IPR036134 -
Pste8g01846 721 Gene3D - 134 293 - -
Pste8g01846 721 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 455 528 IPR036134 -
Pste8g01846 721 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Pste8g01846 721 MobiDBLite consensus disorder prediction 679 721 - -
Pste8g01846 721 Coils Coil 510 530 - -
Pste8g01846 721 Pfam DNA photolyase 7 163 IPR006050 -
Pste8g01846 721 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Pste8g01846 721 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 178 IPR036155 -
Pste8g01846 721 PRINTS DNA photolyase signature 391 405 IPR002081 -
Pste8g01846 721 PRINTS DNA photolyase signature 352 370 IPR002081 -
Pste8g01846 721 PRINTS DNA photolyase signature 143 159 IPR002081 -
Pste8g01846 721 PRINTS DNA photolyase signature 332 348 IPR002081 -
Pste8g01846 721 FunFam Cryptochrome 1 8 148 - -
Pste8g01846 721 Gene3D HUPs 8 206 IPR014729 -
Pste8g01846 721 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Pste8g01846 721 Pfam Blue/Ultraviolet sensing protein C terminal 551 665 IPR020978 -
Pste8g01846 721 Pfam FAD binding domain of DNA photolyase 283 413 IPR005101 -
Pste8g01846 721 Pfam FAD binding domain of DNA photolyase 456 520 IPR005101 -
Pste8g01846 721 MobiDBLite consensus disorder prediction 653 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01846 Pste-Chr8 13162996 13167623 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01846 8 13162996 13167623 Pste8g01846 8 13162996 13167623 ECH
Pste8g01846 8 13162996 13167623 Pste2g02731 2 27506790 27519070 PCT