Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01827 CCTCTATTGTTTTGTTACCCTTCTTTCCTCTCACACTAAATGGCATCCTCTATTGCTTTTGTTTTTGGTCTCTGTCTGGCAATGAACATGGCCCTGCTGACACTGGCAACTACCCACACAGTAGGAGATACCTCAGGTTGGGCACTTGGTGGTGATTACAGCACATGGGCTAGTGGCTTGAAATTTAAAGTCGGTGATACTCTTGTTTTCAATTATGGGGCTGGTCACACTGTGGACGAAGTTAAAGAAAGCGATTACAAGAGCTGCACAACGGGCAATTCACTGAGCACAGACAGTAGTGGCACCACCACCATTACCCTCAAAACTGCTGGCACTCATTACTTCGTATGTGCTTCCCCTGGTCATTGTGATGGTGGCATGAAGCTTGCTATTAAGGTCAAGGCCAAAAAAGCCTCTTCTCCTGCTGTAGCCCCTTCACCTTCAAAGGACTCACCTTCTCAATCTGATGACACCAAAGACAAAGACAAAGACAAAGACACACCCACCACCACCCCTACAACCTCAACCGATACAACCCCTTCTACTCCAACCTCTACTACTGCCACATCTTCTCAGACATCATCAGCAACTTCTGCCTCACCAATTGTTCCTATGGTTATTGTTTCTTTGATCTCATACTTGGCACTGCCTTAGGTGTCAATTTGAGGAGTCAGGACAGAGGCAGTGCTTCAGGGGGGTTTCTTTGCCTTTTAATTTACTCTGCTTTTTCTTCTTTGATCCAATTGACCAATTCAGATTTTGTTATGACCATGAGTGTTATTTATACTAATCTATGTTTCTCGTTTGTTCATATTATATTGTTTAATGTATATGGCCAGGAGTGAGTACCTCTCATTGGAGTCCCA 866 0.4423 MASSIAFVFGLCLAMNMALLTLATTHTVGDTSGWALGGDYSTWASGLKFKVGDTLVFNYGAGHTVDEVKESDYKSCTTGNSLSTDSSGTTTITLKTAGTHYFVCASPGHCDGGMKLAIKVKAKKASSPAVAPSPSKDSPSQSDDTKDKDKDKDTPTTTPTTSTDTTPSTPTSTTATSSQTSSATSASPIVPMVIVSLISYLALP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01827 204 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Pste8g01827 204 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Pste8g01827 204 Gene3D - 22 127 IPR008972 -
Pste8g01827 204 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Pste8g01827 204 Pfam Plastocyanin-like domain 38 114 IPR003245 GO:0009055
Pste8g01827 204 MobiDBLite consensus disorder prediction 140 155 - -
Pste8g01827 204 MobiDBLite consensus disorder prediction 156 188 - -
Pste8g01827 204 CDD Phytocyanin 24 120 - -
Pste8g01827 204 PANTHER BLUE COPPER PROTEIN 22 140 IPR039391 GO:0009055
Pste8g01827 204 FunFam Blue copper 22 126 - -
Pste8g01827 204 MobiDBLite consensus disorder prediction 125 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01827 Pste-Chr8 12832408 12833735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01827 12 129 Miscellaneous Gene Families AT1G22480 53.390 2.23e-35 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01827 8 12832408 12833735 Pste8g01827 8 12832408 12833735 ECH
Pste8g01827 8 12832408 12833735 Pste2g02646 2 26697709 26698658 PCT