Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01786 CACGTTCATCTCTCTCTCCCCTCAAAATCCCAATACGGTAAAATTCCATCTCCATCTTCTGAAGCAGAAACCGAATAATTTCTCCTTGCTCCCAATAGAAAGTTCAAATACAGTTTCAATTCCGACACCGTCTTCTTCTTCTTCTCTTCACACTTCTCCTTCCAAACACTAAGGCGTGACACGTCACCAACCTTCACTCCGCGTCTTCGAGCTACATATGCCTCCTCTCTCACTCTCCCCTCAAAACTCGCTTTTCCGTGCTAACCTCACCCGCCTTTCCGTCACCGCCCAATCCAAGAGGGACCCCTACCGCGATCGCTCCCTCCGCCACCGTCCACGCGCCCCCGCGGCGCGTCTCCTCGCCTTCGCTGGATAAATGCGTATCACCATCGATCTAGGGTTTTGGAGCCTGCTCCTCGTCGCGCTGGTTTCCCTAGCCGTGCCGGCGATCGCCTTCCTCCTCCGTCGCCGGTGTCAGCGGGAGGCGGCCAGAGCGGAGGAGATCAAGAGGCTCCTCGTTCTCGCCGAGGAGGAGACCGTTAGGGCCGAGACCGAGGCTTCCTACTACCAATACGGTGTTGTTTCGGCGCCGAAGAGCAAACTATGCGCTGTGTGTTTCTGTCCCACCACCACGCGGTGCGCCAGGTGCAAAGCTGTTCACTACTGTTCTGGAAAGTGCCAAATTGTTCATTGGCGTCAAGGTCACAAAGATGAATGCCATCCTCCCAGCTCAACTGGCCAGACTGATGATCTGGTAAGTGATCTTGGAAAGAAGGTAGCAGAACCAGACTACTGTGGAATTCATGTTGAGAAGTCTCAGATTAAAAGCACAGAGCATGCAACATCATCCAAGAAAACCCCGTTGTCTGATATGAGCCGTTCTCCTGATATGTCACGGGCAAAGGATGACAGGGTAAGAGTTGAATCTCTTAAAGAGGGAAATGTTACAGGCTCTCATTCTGAGTTATCTAGTCACTCATTCTCTGGATTCTCTGCTTCCACTGGTGCTAGTGAATCATCTTATGATTCTTCTGTCTGTGAGAGTATTACATCAAATGAGCATGAGCGATCTGAGAATTTTGTGGACCCAACCCATGACATTTCTGATACCACTCCAAGTCGTAATAGCGTTGGTGAATCCACTCAATTATCACCGAAGTTTGCCAGTTTGGTTGATTCAGCAGATGGTTATCCAGCAATGCATAAATTAAATCAAGTTAGGCCTGGTTTTGGCAAAGAAGAGACTAAGCTCACATCAAATGGTAGTTCTGGTTTGCGAATGAGGAAAGGGCCAACAATTGAGCATTCTACAGTATCTTCTGGATTCTGGAATAAAAGTCTTGATTCAACGAGGATAAAAGATGACTCTAATAGTGACCCTCTTGCATCCCAGTCTGGTGGTTCTCCTCCAATGTCAGAGAATAAGGGTGTGGATTCTTCAGGTTGTGCGGATGCTATGAGCATCCATAATTTACAAACAGTTGGTTCTAGGGTATCTAATCATGTCATCAACCCTGGTAGATCCTTGGAGTCAGCTGAAAGTAGATGTCTGCCACATGCATTTGTTGATACTAAGTTAGTTTCTAGAACTGAAGAGCATTCACATTATAGTACAAAATGTGGGAATAATGGCATCCAATCTGGCACTGCTGCTTCATCACAGGTTGTTAGCTATCCAAATTATAAGAATGGCCTGAAAACATCTGTTCAAAAAGTTTCTGAAGAGTTTAGAGGATCAAAATTGTCTAAACCCTTTCCATTAGCTGTTGGGAGTGATCTTACTGGAAAATATAGCGACAAGGGTCTTTTTCCATATGATTTGTTTGTCAAGCTTTATAACTGGAACAGAGTGGAGTTGCAACCATTTGGTCTTATAAACTGTGGAAACAGCTGTTATGCTAATGCTGTACTCCAGTGTTTGGCATTTACACCACCCCTGACTGCTTATTTGCTTCAAGGACTTCATTCTAAATCATGTGCAAATAAAAAATGGTGTTTCATCTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAAGACACAAAATCTCCCATCTCACCTGTTGGCATACTCTCCCAATTACAGAATATTGGGAGTCAACTTAGTAATGGAAGAGAAGAAGATGCACATGAATTTCTAAGGCTTGCTGTTGAGACTATGCAATCTGTTTGCCGGATGGATTCTGGGGATAGCACATCAGACTCATTGAAAGAGGAAACTAATTTAATGGGCCTAACATTTGGAGGTTACCTTCAATCAAAGATAAAATGCATGAAATGTGGAGGGAAATCAGAGCGTCAAGAAAGGATGATGGATCTGACCGTTGAGATAGAAGGGGAGATAGCAACCCTGGAGGATGCCCTACGACAGTTTTCAAGTGCTGAGACTCTGGATGGAGAAAACAAGTACCATTGTGTCAGGTGTAAATCTTACGAGAATGCCAAGAAGAAAATGACAGTCTTGGAGGCACCTAATGTTCTTACAATTGCATTGAAGAGATTTCAGTCAGGAAAATATGGGAAGCTCAATAAACCTATTCGATATCCTGAAATACTTGACTTAGCACCTTTCATGAGTGGGACTAGTGATTTGCCTATATACAGGCTATATGGGGTAGTCGTTCACCTGGATATCATGAATGCTGCTTATTCGGGTCACTATGTATGCTATGTGAAGAATTTTCAAAGCAGATGGTTCAAAGTTGATGATAGTGTGGTAACAGCTGTTGAATTGGAAAGCGTCTTGGCAAAAGGAGCATACATGCTTTTTTATTCAAGGTGCTCACCTAGGGCCCCAAGATTAATCAGGAACAGTATAGTATCTGCAGATTCAAAATGGAAACTGAATGGAAAAAATGTTGCAATGAAGGCAAGACGACTATCTACAGCTTCTGGTGCTGGAGTTAATTTTACTTGTTCAGATGGTTCACCCTCCTTAGATACCATCTATTCGAAGTTTCTCCTCCACAAAAGGATTTTGGAAGAAGATTCATCAAGCGATAATTCATCCCTTATTAGCAGCAATTCTGATGAAGGTTCTTGCAGCACAGACAGCACGAGTGACTCAACCGGTACTGATGACTTTGCTGATTATATTTTTGGTGATTTGGGACGTGGCTCAGGTGGCATGTTAAGAAATAGTGATATAGACCCATATGATTCAGTTTCCCCATATTCAACTGGGCTCCAACCACCTTCATCAGGGTCAAAGGTGGAGACAGACTGTCTTTTGTACAGGAATAGAATAGTGGATATTAAAAGGAATGGGGGAGGTGTTACTCATTTTCATCCCGACACAAATATAGAGCATAGGAAATTAGATACAAGTAGGAGTAGCAGTAGTTTTAGGGATACTGACACAGGATCCCACCATTTTAATGATAGATCATGTATAGAGTCACGGAACAGAACGGATTCAAAATTTTATTGACTACCATACGAAGCCCTCAACAGTAAATAATAACTATCCAATGTATTGTTCTAAGC 3483 0.4355 MRITIDLGFWSLLLVALVSLAVPAIAFLLRRRCQREAARAEEIKRLLVLAEEETVRAETEASYYQYGVVSAPKSKLCAVCFCPTTTRCARCKAVHYCSGKCQIVHWRQGHKDECHPPSSTGQTDDLVSDLGKKVAEPDYCGIHVEKSQIKSTEHATSSKKTPLSDMSRSPDMSRAKDDRVRVESLKEGNVTGSHSELSSHSFSGFSASTGASESSYDSSVCESITSNEHERSENFVDPTHDISDTTPSRNSVGESTQLSPKFASLVDSADGYPAMHKLNQVRPGFGKEETKLTSNGSSGLRMRKGPTIEHSTVSSGFWNKSLDSTRIKDDSNSDPLASQSGGSPPMSENKGVDSSGCADAMSIHNLQTVGSRVSNHVINPGRSLESAESRCLPHAFVDTKLVSRTEEHSHYSTKCGNNGIQSGTAASSQVVSYPNYKNGLKTSVQKVSEEFRGSKLSKPFPLAVGSDLTGKYSDKGLFPYDLFVKLYNWNRVELQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKWCFICEFESLILKSKDTKSPISPVGILSQLQNIGSQLSNGREEDAHEFLRLAVETMQSVCRMDSGDSTSDSLKEETNLMGLTFGGYLQSKIKCMKCGGKSERQERMMDLTVEIEGEIATLEDALRQFSSAETLDGENKYHCVRCKSYENAKKKMTVLEAPNVLTIALKRFQSGKYGKLNKPIRYPEILDLAPFMSGTSDLPIYRLYGVVVHLDIMNAAYSGHYVCYVKNFQSRWFKVDDSVVTAVELESVLAKGAYMLFYSRCSPRAPRLIRNSIVSADSKWKLNGKNVAMKARRLSTASGAGVNFTCSDGSPSLDTIYSKFLLHKRILEEDSSSDNSSLISSNSDEGSCSTDSTSDSTGTDDFADYIFGDLGRGSGGMLRNSDIDPYDSVSPYSTGLQPPSSGSKVETDCLLYRNRIVDIKRNGGGVTHFHPDTNIEHRKLDTSRSSSSFRDTDTGSHHFNDRSCIESRNRTDSKFY 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01786 1016 MobiDBLite consensus disorder prediction 331 350 - -
Pste8g01786 1016 SUPERFAMILY HIT/MYND zinc finger-like 73 116 - -
Pste8g01786 1016 ProSitePatterns Zinc finger MYND-type signature. 77 114 IPR002893 -
Pste8g01786 1016 Gene3D Cysteine proteinases 490 810 - -
Pste8g01786 1016 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 497 801 IPR028889 -
Pste8g01786 1016 FunFam Ubiquitin carboxyl-terminal hydrolase 15 68 118 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 224 238 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 170 185 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 150 257 - -
Pste8g01786 1016 Coils Coil 33 60 - -
Pste8g01786 1016 Pfam Ubiquitin carboxyl-terminal hydrolase 497 798 IPR001394 GO:0004843|GO:0016579
Pste8g01786 1016 MobiDBLite consensus disorder prediction 154 168 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 188 223 - -
Pste8g01786 1016 Pfam MYND finger 77 114 IPR002893 -
Pste8g01786 1016 ProSiteProfiles Zinc finger MYND-type profile. 77 114 IPR002893 -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 308 322 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 971 986 - -
Pste8g01786 1016 SUPERFAMILY Cysteine proteinases 493 804 IPR038765 -
Pste8g01786 1016 Gene3D - 67 118 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 239 257 - -
Pste8g01786 1016 FunFam Ubiquitin carboxyl-terminal hydrolase 15 491 809 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 968 1002 - -
Pste8g01786 1016 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 218 804 - -
Pste8g01786 1016 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 498 513 IPR018200 GO:0004843|GO:0006511
Pste8g01786 1016 MobiDBLite consensus disorder prediction 872 896 - -
Pste8g01786 1016 MobiDBLite consensus disorder prediction 279 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01786 Pste-Chr8 12290680 12299443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01786 477 805 Miscellaneous Gene Families AT4G31670 50.151 2.67e-118 375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01786 8 12290680 12299443 Pste8g01786 8 12290680 12299443 ECH