Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01767 TTCCTTCTCCAAAAAGCTCTTTCTTACGACTTTGGTTGAAGAAGAAAAAAATAGAACTGAGATTGAAACAATGGGTTGGGAAGAACCTCTTTATACTCTCTTGACCAAATCATTCGCCTTTCTTTCCTGGCCTCCAGTTAGTTTGTTTTTCCCATTGTTTGTTTCTGTTCGGGCAATGGAGAGTGATTCCCCTTCCAGCAACCAACGATGCCTTACTTTTTGGGTTCTCTTCTCCTTGTGCATGATCATGGAGTGGGAACTTTCAGTCATCCCATGGTGGCCTCATGTGAAATCCATAGCAACTATCCTGCTGCTGATACCTTATGTTGGTGCAGCACCATATGTCTATAAATTCTTAATCAGACACTACTGCACTTGCAACCTATTTACAATGAATTCGAACATCTTCGGTGAGAAGGGCACAGATTTTGAATCCGACGAATATAATAAATTTGATATAGATGAACTTGCTGGTTGTGACAAGAGAGGAAGTAGTCACACAAGGCTAACTAGTAAAAAGCTGGTCCAGAAGGAATGGAGCTGTGCTTTGTGTCAGATTTGTACTACCAGTGAAAATTGCTTAAGGGCTCATCTTAAAGGGAAGAAACACAAGGATAAGGAAAGCGAGCTTAGAGTTGAGATTCATGTAACAAATAGCGCATACCTGTTATCCTCCTCTCAGAAAAGAATCAAACAGATGTCTCTAATAAGGAATCTCAACCAAATTTCAAACATTCTCAATCCAGTTTCCAGATCCATAAGATGGTGTGAATGGATAAAGCCTGAGTTTGGATGGACAAAATTAAATACTGATGGTTCTATTCATAAAGGCACTGCTAGTTTTGGTGGGCTGCTTCGTGATTACAGGGGCAAGCCAATATGTGCCTTTGTCTCTAAAGCTCCTCAAGGAGATGTTTTCTTGGTTGAGCTGTGGGCCATATGGAGAGGCCTTGTTCTTTCCTTAGGTCTTGGGATTAAAGCAATATGGGTAGAATCAGACTCCATGAGTGTTGTGAAGACAGTTAATAGGAAACAACTTTGTACAAAAGCTGATAGCTATTTGAAACAAATATGGAAACTATTAAAGAAGTTTGATAAATATCAAATTTCTCACTCATGGCGTGAAACTAACAGAGCAGCAGATCATCTTGCTAAGATGGATCTTTGGGGAAATGATGTGATTTTGTGGCCAGATGATTTTCCACCTAGCCTTTGCAGTATCATTAAAGATGATGCCAAAGGAAAGAAATATATTAGAAGA 1261 0.3957 MGWEEPLYTLLTKSFAFLSWPPVSLFFPLFVSVRAMESDSPSSNQRCLTFWVLFSLCMIMEWELSVIPWWPHVKSIATILLLIPYVGAAPYVYKFLIRHYCTCNLFTMNSNIFGEKGTDFESDEYNKFDIDELAGCDKRGSSHTRLTSKKLVQKEWSCALCQICTTSENCLRAHLKGKKHKDKESELRVEIHVTNSAYLLSSSQKRIKQMSLIRNLNQISNILNPVSRSIRWCEWIKPEFGWTKLNTDGSIHKGTASFGGLLRDYRGKPICAFVSKAPQGDVFLVELWAIWRGLVLSLGLGIKAIWVESDSMSVVKTVNRKQLCTKADSYLKQIWKLLKKFDKYQISHSWRETNRAADHLAKMDLWGNDVILWPDDFPPSLCSIIKDDAKGKKYIRR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01767 397 Pfam Zinc-finger of C2H2 type 156 180 - -
Pste8g01767 397 Pfam TB2/DP1, HVA22 family 28 100 IPR004345 -
Pste8g01767 397 PANTHER OS05G0353850 PROTEIN 201 390 - -
Pste8g01767 397 SMART ZnF_U1_5 153 187 IPR003604 GO:0003676|GO:0008270
Pste8g01767 397 CDD RNase_H_like 245 362 IPR044730 -
Pste8g01767 397 Gene3D - 240 365 IPR036397 GO:0003676
Pste8g01767 397 Pfam Reverse transcriptase-like 246 363 IPR002156 GO:0003676|GO:0004523
Pste8g01767 397 Gene3D Classic Zinc Finger 143 194 - -
Pste8g01767 397 SUPERFAMILY Ribonuclease H-like 242 369 IPR012337 -
Pste8g01767 397 SUPERFAMILY beta-beta-alpha zinc fingers 146 189 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01767 Pste-Chr8 11970679 11973679 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01767 8 11970679 11973679 Pste8g01767 8 11970679 11973679 ECH