Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01758 ACCGCCAACCCATATATATACCACCTTTTGAACCCAAAACCATCATTGCGTTAGTCGCAAAACACATCGCATCGCAATGGCCATGGCTCTTCGCAGACTCTCCTCTACCATCAACAAGCCTTTGGCCAACGCCACTTCCATTTATCGCACGTCTTCTTCCATCTCTGCTCACGAAAAAGACAAATCTCGCGTCGATTGGATAAAGCAGCTCAACGATCCTCTCGAGGTCGTGGATCCCGAGATCGCGGACATAATCGAGCTCGAAAAAGCGCGTCAATGGAAGGGGCTCGAACTTATACCTTCGGAAAATTTCACGTCACTGTCGGTGATGCAAGCCGTTGGATCGATTATGACGAATAAATACAGCGAAGGTTATCCCGGTGCTAGATACTATGGAGGAAACGAGTACGTGGATCTGGTTATAAATGTGTTCTTTCGAATTCGGAAATTTAGTATAGATTCTAGCTTTGGTGTATGTGTTGATTTTGAGCTTACGTGTATAATTTGTCGTTTAGGTACATTGACATGGCTGAGACCTTGTGTCAGAAGCGTGCACTGGAAGCTTTTCGGTTGGATCCAGCAAAATGGGGAGGTAAGTAAGCGCGCGAAGTCACTCATGAGGCAACTTGAGTTTCTTTCTTCTGATCCAGATTGGTGGTGTACATTCAACGTGCAATCATTATCTGGATCCCCTTCTAACTTCCAAGTTTACACTGCTTTATTGAAACCTCATGAGAGAATCATGGCTCTTGATCTTCCCCACGGTGGGCATCTATCGCATGGTTATCAGACTGACACCAAGAAGATATCCGCTGTATCTCTATTTTTTGAAACAATGCCATACAGAGTGAATGAGAGTACTGGTTATATCGATTATGACCAGGGAGCAGAATTGATGGAGAAAAGTGCAGCACTTTTCCGGCCAAAGTTAATAGTTGCTGGTGCTAGTGCTTATGCTCGTCTTTATGATTATGAACGTGTTCGAAAGGTCTGTGATAAGCAGAAAGCAGTTATGCTGGCTGATATGGCACATATCAGTGGATTGGTTGCTGCAGGTGTTATTCCTTCTCCTTTTGATTATGCAGATGTTGTAACAACCACAACACATAAGTCACTTCGTGGACCTCGTGGAGCTATGATTTTCTTCAGGAAGGGTGTGAAAGAGATAAACAAGCAAGGGAAAGAAGTGTTGTATGACTATGAAGACAAAATAAATCAGGCTGTTTTTCCTGGACTTCAAGGTGGTCCCCACAATCAGACTATTGCAGGCTTAGCAGTTGCACTGAAGCAGGCTATGACGCTAGAATTCAAGAATTACCAAAAGCAAGTACTTAGCAACTGCTCAGCATTTGCACAGAGTTTGTTAGAGAGAGGCTATGAACTTGTATCTGGTGGAACAGAGAACCATTTAGTGTTAGTGAACTTAAGAAACAAGGGCATTGATGGTTCTAGGGTTGAGAAGGTACTAGAAGCAGTTCATATAGCTGCCAATAAAAATACCATTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGGAACCCCTGCACTCACGTCTAGGGGATTTGTTGAGGAAGATTTTCGAAAAGTAGCTGAATACTTTGATGCAGCTGTTAAGTTAGCCTTGCAGATTAAGGAAAATACTAATGGTACAAAGTTGAAGGATTTTGTGGCAGCTATGCAATCAGATGAACAAATTCAATCTAAAATTGCTAATCTCCGTCATGAAGTAGAGGATTATGCTAAGCAGTTTCCCACAATTGGGTTTGACTTAGAAACAATGAAGTATGGTAAGTGAAGACGACACCCGAGGGAATTCTGGAGTATTATTTGGAAGCTTTTGGAACTAATAACGAGTAATTAGACGCGTTGCTCAATGGATTGTATTGTAGTCTCCTATGAAAATGTTAACTATATTTTCAGTTATTTAAGTGAGAAAAAAAAAAGGAGAGAATTTTCTTTTCTTGCAGTCTGAGAAAATATACTATTGGCTTCACGAAAAAATTCCTTTTGATCGCCGATATCATATTGATGTAGTAAAAAAAAAAAAAAAAGAAAGAGGAGGTCACACACTTGTGGATTTTGCGATTTGGGAAGTTTGTAGTAGTATTTTGAAATAAATTACCTTAATTTCTCCTCCAGTTATAAATTACAGAACTTTAGTAATAACTTCATTCAA 2188 0.409 MAMALRRLSSTINKPLANATSIYRTSSSISAHEKDKSRVDWIKQLNDPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSIMTNKYSEGYPGARYYGGNEYVDLVINVFFRIRKFSIDSSFGVCVDFELTCIICRLGTLTWLRPCVRSVHWKLFGWIQQNGEVSKRAKSLMRQLEFLSSDPDWWCTFNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSLFFETMPYRVNESTGYIDYDQGAELMEKSAALFRPKLIVAGASAYARLYDYERVRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNQTIAGLAVALKQAMTLEFKNYQKQVLSNCSAFAQSLLERGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLEAVHIAANKNTIPGDVSAMVPGGIRMGTPALTSRGFVEEDFRKVAEYFDAAVKLALQIKENTNGTKLKDFVAAMQSDEQIQSKIANLRHEVEDYAKQFPTIGFDLETMKYGK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01758 576 SUPERFAMILY PLP-dependent transferases 183 566 IPR015424 -
Pste8g01758 576 CDD SHMT 52 538 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste8g01758 576 Hamap Serine hydroxymethyltransferase [glyA]. 48 566 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste8g01758 576 Coils Coil 541 561 - -
Pste8g01758 576 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 337 353 IPR019798 GO:0030170
Pste8g01758 576 Gene3D - 78 412 IPR015421 GO:0003824
Pste8g01758 576 FunFam Uncharacterized protein 290 411 - -
Pste8g01758 576 Gene3D Aspartate Aminotransferase, domain 1 413 569 IPR015422 GO:0003824
Pste8g01758 576 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 34 568 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste8g01758 576 FunFam Serine hydroxymethyltransferase 401 564 - -
Pste8g01758 576 Pfam Serine hydroxymethyltransferase 49 118 IPR039429 -
Pste8g01758 576 Pfam Serine hydroxymethyltransferase 181 511 IPR039429 -
Pste8g01758 576 SUPERFAMILY PLP-dependent transferases 44 120 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01758 Pste-Chr8 11827107 11834818 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01758 8 11827107 11834818 Pste8g01758 8 11827107 11834818 ECH