Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01749 ATGGGAACCCGTTGGAGAAGAGCATTTTGCACCAGTGAGCCTGAATCAACAATTGACACCCAAGACAGTCCTTCCAGCGGAAGCTGTGTAAGATTAGGTTTCCTCCAACCTCAGGCTTTAGTTCTCACTTCAAACGACACCCCAACATTTCAAACCAAATCCTCTCCTCTCTCCCTCTTGAAAAACACCTTCAAATTCAGAACTAGTTGCGGAATCTGTTCCAATAGCGTTAAGACAGGGCAGGGAACGGCCATTTACACTGCAGAGTGCGGTCACGCGTTTCACTTTCCCTGCCTCATTTCCCTTTCCCATGCACGCAGCCACCTCTGCCCCGTCTGCCACGCCACATGGAACCACCTCCCTCTCCAACAAAACGACGCCCCTCAAACTCATTCCTACCACGACGACGAGCCTCTTTTCTCTTCTCTCTCTTCCTCTGCCCAAATCCTTCCCATCCCCGAAGAAGACGAAAACCCTCTATCTTCTTCTCCGCCACTCCACTCTCAATCCACCACTGTTCGAGTCAAGCTCATGCCGGAGTCCGCTGTCGTATCACTTTCTCAAACCCACCAAACACGTGCTTTCGTTTTAAGACTCAAGGCTCCACCGCCTCCCCCGCCGCCACGCCTTCGCCCTCCCATGGATCTCCTCGCCGTTCTTGCTCTTACCAACGGCATGACCGCTCCCAAGCTCCACATGCTAAAGCGCGCTATGCGGTTGGTTATATCCTCTCTCGCCGCCGCTGACCGGCTCGCCGTTGTGGCCTTCTCGGCTAATCCCCAACGGTTGCTACCTCTCACACGAATGACTCCTCAGGGACAACGCGCTGCTCGGCGCGTCCTGGATCGGCTCCTCTGCCCACAAGGAAATGGCTCTGCTGAAGAGGCTATCCAGAAAGCGGCCAAGGTTCTCGAAGATCGTAGAGAGAGAAACCCTCTCGGTAGGATCTTGCTTCTATCCGACGGTCACCACGACAGCAAGAGCAAAAATCAACGGAGACGCTTCAGCCACGTTTCTTTCACTCCTTTCGCTTGTATTGAAGTTCCGGTTCATTCTTTTGGGTTCGAGACAAATAAAACCGGCTTAATACACGAACCGTTGGACGATGATTTTGCACAATACGTTGATAGAACATTGAGTGTGGCGGTTCAGGATTTCAGAATTCAGCTTGGCTTCTCGTCGCCGGCTGAAATTCGAGCCGTTTATTCATGCAGCGGGGGACCAACTGCACTGAGCACAAGCTCGGCTCGGCTTGGAGATTTATACGCCGAAGAAGAGAAGGAGTTGTTGGTGGAGGTTAGAGTGCCCACGTCAGCATTGGGGACCCTCCACGTGATGACAGTGCGGTGTGTTAACAAAGATCCTGCGTCTCACGAATTCGTCTACGGTGCGGAACACGCTTTTACCGTGGTGCCACCTAAGAACACTTCAGTTTGTAGCGGCAAGGTTGAGAGGCTAAGAAATGTGTTCATAACGAGCCGAGCCGTAGCCGAGTCGAGGAGACTAGCAAAGCATAATGAGTTTTCGAGTGCTCATCATCTGCTGGCTTCGGCTCGGGCGCTTCTGTTACAGTTCGGCTCGGCTGAGGAGTACGTGCGCGGCTTGGAGGCGGAGCTTGCGGAGCTTCAGTGGCGGAAGCAGCAGCGGAATGAGAGGGAGGTGGAAGAGCGTGGAGAGGTATTGACGCCGACGTCGGCTTGGAGAGCCGCTGAGAAGCTTGCTAAGATGGCTAGGATGAAGAAGTCGTTGAATAAAGTGAGCGACTTGCACGGCTTCGAGAACGCTAGGTTTTAA 1794 0.5329 MGTRWRRAFCTSEPESTIDTQDSPSSGSCVRLGFLQPQALVLTSNDTPTFQTKSSPLSLLKNTFKFRTSCGICSNSVKTGQGTAIYTAECGHAFHFPCLISLSHARSHLCPVCHATWNHLPLQQNDAPQTHSYHDDEPLFSSLSSSAQILPIPEEDENPLSSSPPLHSQSTTVRVKLMPESAVVSLSQTHQTRAFVLRLKAPPPPPPPRLRPPMDLLAVLALTNGMTAPKLHMLKRAMRLVISSLAAADRLAVVAFSANPQRLLPLTRMTPQGQRAARRVLDRLLCPQGNGSAEEAIQKAAKVLEDRRERNPLGRILLLSDGHHDSKSKNQRRRFSHVSFTPFACIEVPVHSFGFETNKTGLIHEPLDDDFAQYVDRTLSVAVQDFRIQLGFSSPAEIRAVYSCSGGPTALSTSSARLGDLYAEEEKELLVEVRVPTSALGTLHVMTVRCVNKDPASHEFVYGAEHAFTVVPPKNTSVCSGKVERLRNVFITSRAVAESRRLAKHNEFSSAHHLLASARALLLQFGSAEEYVRGLEAELAELQWRKQQRNEREVEERGEVLTPTSAWRAAEKLAKMARMKKSLNKVSDLHGFENARF 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01749 597 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 162 IPR013083 -
Pste8g01749 597 Pfam von Willebrand factor type A domain 224 323 IPR002035 -
Pste8g01749 597 Gene3D von Willebrand factor, type A domain 222 379 IPR036465 -
Pste8g01749 597 Coils Coil 532 552 - -
Pste8g01749 597 SMART VWA_4 213 388 IPR002035 -
Pste8g01749 597 Pfam RING-like zinc finger 70 99 IPR001841 -
Pste8g01749 597 SUPERFAMILY vWA-like 199 329 IPR036465 -
Pste8g01749 597 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 68 592 - -
Pste8g01749 597 ProSiteProfiles Zinc finger RING-type profile. 70 114 IPR001841 -
Pste8g01749 597 ProSiteProfiles VWFA domain profile. 215 368 IPR002035 -
Pste8g01749 597 SMART ring_2 70 113 IPR001841 -
Pste8g01749 597 SUPERFAMILY RING/U-box 63 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01749 Pste-Chr8 11658544 11660409 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01749 8 11658544 11660409 Pste8g01749 8 11658544 11660409 ECH