Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01557 ATGGAATACCTTGGCAGAAACCCTGGAAACACAGCACCCCTGACACCCCTCACGTTCTTGGAAAGAGCAGCTATTGTGTACGGTGACTCAAAGTCTATTCTCTACAAGAACAACATTTGCTTCACCTGGTCCCAAACCCAGCGTAGATGCCTCCAAGTAGCGTCCTCCCTAAGTTCTCTCGGTCTAGGAGGTGGCCAAGTCATCTCTGTTCTCTGTCCCAACACTCCTTCAATGTATGAACTTCAATTCGCCATTCCAATGTGTGGAGCCATTCTCAACAACCTCAACATCCGTCTCGACCACCACACGCTTACGGTACTCCTGGGCCACAGCCAATCAAAGCTCCTCTTCGTCCACTCACACTGCCTCCCGCTAGCCCTAACAGCCCTCGCCAATTTCACTGAAACCACCACGCCTCCTTCCCTCGTCCTTATAACCGATGACGATGACGATGACGATGACGATGACGATGCACTCGCACACCCCACACCTGCTCCCGTCATCGACACTTACGAGGGGCTCATACAAAAAGGCGACCCAAACTTCCAGTGGGCCAGGCCCAACTCGGAGTGGGACCCAATAACCTTAAACTACACTTCCGGTACCACGTCCTCTCCAAAGGGAGTAGTACACTCCCACCGCTCAGGCTTCATAATGGCGCTAGACTCTCTCATCGACTGGTCCGTGCCAAAACAACCCGTATACTTATGGACCCTCCCCATCTTCCACTCTAACGGCTGGACCTTCCCCTGGGCCATTGCAGCCGCAGGCGGCACTAACATCTGCACACGTCGCATCAACGCCCCTACAATCAACCGTTTGATCCAAATGCACAACGTAACACACATGTGCGCCGCCCCCGTCCTTCTCAACATGCTCTTAACAACTACGCCCACCCCACCGCTCAACAACCCAGTTCACCTCCTCACCGGAGGCTCCCCTCCTCCCCCGCCGCTCCTCACACTCGCCGAGCAGTTAGGCTTCAAGGTCACTCACGGCTACGGCATGACCGAGACCTTGGGAGTCGTCGTCTCCTGCGCCTGGAAGCCACACTGGGATCGCTTCCCGCCCACCCACCGGGCCAGGTTGCTGTCTAGACAGGGGGTCAGGACGCTCTCCATGACGGAGGTCGACGTCGTCCATCCGACCACCGGACTTAGCGTCAACCGCGACGGCGTCACCTCCGGTGAGATAGTTCTTCGTGGGCCCTGCGTCATGTTGGGTTACTTGAAAGACGAACAAGCTACCAAAAGCTGCATCAGAAACAATGGTTGGTTGTACACAGGCGATGTGGGGGTTATGCATGCAGATGGGTATCTTGAAATAAAGGATCGGTCCAAGGATGTCATAATAAGTGGGGGTGAGAATTTGAGCAGCGTGGAGGTTGAGGCCGTGTTGTATGCTCACCCGGCTGTCAACGAGGTGGCGGTGGTGGCGCGCCCCGACGAGTTTTGGGGGGAGACTCCCTGCGCTTTTGTGAGGCTCAAGGAGGGGCTGGTCACGCCGCCGTCGGTGGGGGAGGTGGTGGAGTTTTGCAGAGAGAGATTGCCGCACTTCATGGTGCCCAAAACGGTGGTGTTTAAGGAGGCGCTGCCCAAGACATCGACGGGGAAGATTCAGAAGCACTTGCTGAGGATGGATGCGCAGGCTATGGGGTCCTTGGTCGTGCCACTGTCACCTACACCTAGTCGCATATAG 1698 0.5612 MEYLGRNPGNTAPLTPLTFLERAAIVYGDSKSILYKNNICFTWSQTQRRCLQVASSLSSLGLGGGQVISVLCPNTPSMYELQFAIPMCGAILNNLNIRLDHHTLTVLLGHSQSKLLFVHSHCLPLALTALANFTETTTPPSLVLITDDDDDDDDDDDALAHPTPAPVIDTYEGLIQKGDPNFQWARPNSEWDPITLNYTSGTTSSPKGVVHSHRSGFIMALDSLIDWSVPKQPVYLWTLPIFHSNGWTFPWAIAAAGGTNICTRRINAPTINRLIQMHNVTHMCAAPVLLNMLLTTTPTPPLNNPVHLLTGGSPPPPPLLTLAEQLGFKVTHGYGMTETLGVVVSCAWKPHWDRFPPTHRARLLSRQGVRTLSMTEVDVVHPTTGLSVNRDGVTSGEIVLRGPCVMLGYLKDEQATKSCIRNNGWLYTGDVGVMHADGYLEIKDRSKDVIISGGENLSSVEVEAVLYAHPAVNEVAVVARPDEFWGETPCAFVRLKEGLVTPPSVGEVVEFCRERLPHFMVPKTVVFKEALPKTSTGKIQKHLLRMDAQAMGSLVVPLSPTPSRI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01557 565 Gene3D - 6 447 IPR042099 -
Pste8g01557 565 FunFam 2,3-dihydroxybenzoate-AMP ligase 447 552 - -
Pste8g01557 565 PANTHER ACYL-ACTIVATING ENZYME 6 554 - -
Pste8g01557 565 SUPERFAMILY Acetyl-CoA synthetase-like 12 546 - -
Pste8g01557 565 Gene3D - 448 551 IPR045851 -
Pste8g01557 565 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Pste8g01557 565 Pfam AMP-binding enzyme 27 452 IPR000873 -
Pste8g01557 565 Pfam AMP-binding enzyme C-terminal domain 461 538 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01557 Pste-Chr8 8871046 8872743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01557 1 551 EF-hand Containing Proteins AT1G21540 58.423 0.0 668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01557 8 8871046 8872743 Pste8g01557 8 8871046 8872743 ECH