Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01556 ATGGAACTGCTGAAGCCAAGTGGTGCTAACTCAACCCCTCTGACTCCGCTTGGCTTCTTGGACAGAGCAGCAAGTGTATACGGCCACGTCACTTCCCTGATCTACAACCAAACCACCTTCACCTGGTCCCAAACGCACCGCCGATGCCTCCAGCTTGCCTCCGCCCTCTCATCTCTAGGCATCCGCCGCGGAAGCGTCGTCTCCGTCCTGGCCCCCAACATTCCCGCCATGTACGAGCTCCACTTTGCCATCCCCTTCGCCGGCGCCGTCATCAACAACATCAACACTCGCCTGGACGCCCGCACCGTGTCGGTGATCCTCCGCCACGGCAGCTCCACCCTCGTCTTCGTCGACTGCGCCTCACGCGATCTCATCCTGGAAGCATTATCCCTATTCCCTAAAGACAGTCAACGCCCAATCCTCATACTAATAAGCGACGAGTCCGTGGAGAAAGTCACCCCCACCCCCACCCCCACCGTTGATTTCCGTGACACCTACGAGGGCCTCATCAACAAGGGCGATCCCGATTTCGAGTGGGCCCGGCCCAACTCGGAGTGGGACCCCATGATACTTAACTACACCTCCGGTACGACGTCGTCTCCCAAAGGCGTTGTCCACTGCCACAGGGGAACGTTTATAGTCACAGTAGACTCTCTTATCGACTGGGGAGTTCCCAAGAACCCCGTTTATCTGTGGACGCTTCCCATGTTCCACGCCAACGGCTGGAGCTTCCCCTGGGGGATCACTGCTCTAGGGGGGACTAATATTTGTGTCCGCAAGTTCGATGCGGAGATTGTTTACTCTCTCATAAAGCGCCATCACGTAACTCACATGTGTGGCGCCCCCGTGGTGCTCAACATCTTGACCAACTCTCCCGATAGCAAACCGTTGGACAACCCCGTTCAGATCTTGACCGCCGGAGCCCCGCCTCCTGCCGCCGTCCTCTTCCGGACGGAGGCCCTTGGCTTTCTCGTCAGCCATGGCTATGGGCTGACGGAGACCGGTGGCTTGGTGGTGTCGTGCGCCTGGAAGGATAAGTGGAACCGGTTGCCGGCCACCGAGAGGGCCCGGCTGAAGGCGCGGCAGGGGGTGAGGACGGTGGGGATGGCGGAGGTGGACGTCGTGGGTCCCAGCGGGGAGAGCGTGAAGCGCGACGGGGTTACCGTTGGGGAGGTTGTGATGAGAGGAGGGTGCGTCATGTTAGGGTACCTTAAAGATCCCCAAGGTACCAAGACTTGTTTTAAGAATGGATGGTTCTACACTGGGGATGTTGGAGTGATGCATGAAGACGGGTACTTGGAAATTAAGGATAGGTCAAAGGATGTTATTATTAGTGGGGGTGAAAACCTAAGCAGTGTTGAGGTGGAGTCCATTTTATACGGTCACCCGGCGGTGAATGAAGCAGCGGTGGTTGCCAGACCCCATGAGTATTGGGGAGAGACGCCGTGTGCCTTTGTCAGCTTGAAAGTGGGTTTGAAAGAGAAACCCACTGAGTCAGATATAATTCAGTATTGTAGGGACAACATGCCCCACTATATGGTTCCTAAAACGGTCATTTTCAGAGATGAACTTCCCAAGACATCCACAGGGAAGATCCAGAAGTTTGTGCTCAGACAAATTGCTAAGGACATGGCCTCCACCCCCACGCAAAGTCGAATGTGA 1662 0.562 MELLKPSGANSTPLTPLGFLDRAASVYGHVTSLIYNQTTFTWSQTHRRCLQLASALSSLGIRRGSVVSVLAPNIPAMYELHFAIPFAGAVINNINTRLDARTVSVILRHGSSTLVFVDCASRDLILEALSLFPKDSQRPILILISDESVEKVTPTPTPTVDFRDTYEGLINKGDPDFEWARPNSEWDPMILNYTSGTTSSPKGVVHCHRGTFIVTVDSLIDWGVPKNPVYLWTLPMFHANGWSFPWGITALGGTNICVRKFDAEIVYSLIKRHHVTHMCGAPVVLNILTNSPDSKPLDNPVQILTAGAPPPAAVLFRTEALGFLVSHGYGLTETGGLVVSCAWKDKWNRLPATERARLKARQGVRTVGMAEVDVVGPSGESVKRDGVTVGEVVMRGGCVMLGYLKDPQGTKTCFKNGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESILYGHPAVNEAAVVARPHEYWGETPCAFVSLKVGLKEKPTESDIIQYCRDNMPHYMVPKTVIFRDELPKTSTGKIQKFVLRQIAKDMASTPTQSRM 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01556 553 PANTHER ACYL-ACTIVATING ENZYME 3 547 - -
Pste8g01556 553 CDD ttLC_FACS_AEE21_like 12 538 - -
Pste8g01556 553 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Pste8g01556 553 Gene3D - 4 440 IPR042099 -
Pste8g01556 553 Pfam AMP-binding enzyme 21 445 IPR000873 -
Pste8g01556 553 FunFam Long-chain-fatty-acid--CoA ligase FadD 3 440 - -
Pste8g01556 553 SUPERFAMILY Acetyl-CoA synthetase-like 11 544 - -
Pste8g01556 553 FunFam 2,3-dihydroxybenzoate-AMP ligase 440 545 - -
Pste8g01556 553 Gene3D - 441 553 IPR045851 -
Pste8g01556 553 Pfam AMP-binding enzyme C-terminal domain 454 531 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01556 Pste-Chr8 8856933 8858594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01556 1 544 EF-hand Containing Proteins AT1G21540 62.795 0.0 721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01556 8 8856933 8858594 Pste8g01556 8 8856933 8858594 ECH