Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste8g01168 | TTTTGGCTTAGCTTACGAGATCTATGCATCGTCTGGTCATTGTAGAAACCAGTTCAATTCCACTTCCACTCCCTTTCTTCTCCCTCATTTTATTTGTGTCAGAAGTCCAATATACCGTTTCGTTTCTCTCTCTCTCTATTTCCTCTTCCCTTTGAAGAGGGTCCAAGTCCTCGCTTCCGCTGCTTCCAGATCTCGCAGCGATTTGGATCCTCCTCAAGCTCTGTTCCCTATCCGTTCACGAATTCAACGCCGGCTGCAGATCCGATTCTTCTATTCTCAGTTCCTCGATCTAAGTCACCATGGCGGCCGCGAATGCTCCGATCACCATGAAAGAAGCCCTAACTTTGCCGAGCGTTGGCATCAGTACCCAATTCATCACTTTCACGCACGTGACGATGGAATCGGATAAGTATATATGTGTTCGAGAAACCTCTCCGCAGAATAGCGTTGTTATCGTTGATATGAACATGCCAAATCAACCTTTGAGGAGGCCTATCACTGCAGATTCCGCTCTTATGAATCCGAATTCCAGAATCCTTGCTTTGAAAGCCCAATTGCAAGGGACTACTCAAGATCACCTACAAATATTTAATATTGAGATGAAAGCAAAGATGAAATCATATCAAATGCCTGAGCAGGTAGTCTTTTGGAAGTGGATTACCCCCAAGATGTTGGGTCTCGTAACACAGACATCTGTATATCACTGGTCAATTGAGGGTGACTCTGAACCTGTTAAGATGTTTGAGAGAACAGCAAATTTGGCAAACAACCAGATAATTAATTATCGATGTGACCCTACTGAAAAATGGCCGCAATTGGTTAAGGGAAACATGCAACTTTTCTCTGTTGATCAACAACGCAGTCAGGCTCTTGAAGCTCATGCTGCAGCATTCGCCCAATTTAAAGTTCCTGGGAATGAAAACCCTTCTGTTTTGATATCTTTTGCCTCAAAGACACTTAATGCTGGCCAAGTTATATCCAAGTTGCATGTTATTGAGCTAGGGGCACAGCCAGATTTTGCTGATGATTTTCCAGTTTCCATGCAGATATCGCACAAATACAATTTGATTTACGTGATTACGAAACTTGGCCTACTATTTGTCTATGATTTGGAGACAGCTACTGCTGTCTATAGGAACAGAATCAGTCCAGATCCCATATTTTTGACCTCAGAAGCTACATCTGTGGGTGGTTTTTATGCCATCAACAGGAGAGGCCAGGTTTTATTGGCTACTGTTAATGAACAAACCATTGTGAATTTTGTCAGTGGTCAATTAAACAATTTGGAGCTGGCAGTTAGTCTTGCCAAAAGAGGAAATCTTCCTGGTGCTGAGAAGCTGGTAGTGGAACGTTTTCATGAACTGTTTGCCCAAACAAAATATAAAGAAGCTGCAGAGCTTGCAGCTGAATCTCCACAAGGGATACTTCGAACTCCTGAAACAGTTGCCAAATTTCAGAGTGTTCCTGTGCAAGCTGGGCAAACTCCTCCTCTGTTGCAGTATTTTGGAACACTTCTAACAAAGGGAAAGCTAAATGCCTTTGAATCATTGGAATTGTCACGGTTGGTTGTGAATCAGAACAAGAAAAATCTGTTGGAAAATTGGTTGGCAGAGGATAAGCTTGAATGCAGTGAGGAACTAGGAGATCTTGTTAAGACTGTCGACAATGATCTTGCTTTAAAAATTTATATCAAAGCCAGGGCTACTCCAAAAGTTGTTGCTGCCTTTGCTGAGAGGAGGGAGTTTGACAAAATTCTGATATACTCTAAACAGGTTGGGTACACACCTGACTACCTCTTCCTTCTGCAAACAATTCTCCGGACAGATCCTCAGCTCCTCTTGCCTGCCACCTTGTTACTTGTTAGATTTGTGGGTGCTGTTAATTTTGCATTAATGATGTCTCAAATGGAGGGAGGTAGCCCGGTTGATTACAACACTATAACGGATCTCTTTCTTCAGAGAAATCTAATCCGAGAGGCAACAGCTTTTCTCCTGGATGTTTTAAAGCCAAATCTACCAGAACATGGGTTCCTTCAGTCAAAGGTGTTGGAGATAAATCTGGTGACTTTCCCCAATGTTGCTGATGCAATATTGGCTAATGGCATGTTCAGCCATTATGACCGTCCTCGTATTGCCCAACTTTGTGAAAAGGCTGGCCTCTATGTGCGAGCTTTGCAACATTACACAGAGTTACCAGATATAAAACGCGTGATTGTTAATACACATGCAATTGAACCTCAGTCACTGGTAGAGTTTTTTGGTACACTGTCACGAGAATGGGCGTTAGAGTGCATGAAAGACTTATTGCTGGCCAATCTTAGGGGCAACTTACAGATCATTGTGCAGGTTGCTAAAGAATATTGTGAACAATTGGGTGTTGATGCCTGCATAAAACTTTTTGAGCAGTTTAGGTCATATGAGGGACTCTACTTTTTCCTTGGATCTTACTTGAGCTCCAGTGAGGATCCTGACATTCACTTTAAGTACATTGAGGCAGCTGCAAAAACTGGTCAAATCAAGGAGGTCGAGCGTGTGACAAGAGAATCAAATTTCTATGATGCTGAGAAAACAAAGAACTTTCTGATGGAGGCTAAACTTCCAGATGCACGACCTTTGATTAATGTTTGTGATCGTTTTGGTTTTGTTCCAGATCTAACACATTATCTATACACAAACAACATGCTTCGCTACATTGAAGGCTATGTTCAGAAGGTGAACCCAGGGAATGCACCTTTAGTTGTTGGGCAGCTGCTAGATGATGAATGCCCTGAAGATTTTATCAAAGGCCTGATTCTTTCTGTTCGCTCATTACTGCCAGTAGAGCCCCTTGTGGAGGAATGTGAGAAGAGGAATCGGCTTCGTTTGCTCACACAGTTCTTGGAACATCTTGTAAGTGAGGGAAGCCAGGATGTGCATGTTCATAATGCACTGGGTAAAATTATCATTGATAGCAACAACAATCCAGAACATTTCCTCACAACCAACCCATACTATGATTCTAGAGTTGTGGGCAAGTACTGTGAGAAACGTGATCCCACCTTGGCAGTTGTGGCTTATCGACGAGGACAATGTGACAATGAACTTATCAATGTCACCAACAAAAATTCTTTGTTCAAACTGCAAGCAAGATATGTTGTTGAGAGAATGGATACTGATTTGTGGGCTAAAGTTCTTGATCCTGATAATGAATATAGAAGGCAACTTATTGATCAGGTTGTATCTACTGCTTTGCCTGAAAGCTCAAGCCCTGAGCAAGTTTCTGCAGCTGTTAAGGCTTTCATGACAGCTGACCTGCCTCATGAATTGATTGAACTTCTTGAGAAGATTGTGCTTCAGAATTCTGCATTCAGTGGGAACTTTAATTTGCAGAATCTTCTTATTTTGACAGCAATAAAGGCTGATCCATCCAGAGTTATGGATTATGTTAATAGATTGGATAATTTCGATGGGCCCGCAGTTGGAGAGATGGCTGTAGAAGCTCAGTTATATGAGGAGGCATTTGCCATTTTTAAGAAGTTCAACTTGAATGTTCAAGCAGTCAATGTGTTACTTGATAATATTCATAGTATTGATAGAGCTGTTGAGTTTGCTTTCAGAGTTGAAGAAGATGCTGTTTGGAGTCAGGTGGCAAAGGCTCAACTCCGAGAAGGGCTAGTAAGTGATGCAATTGAGTCATTTATACGAGCAGATGATGCTACACAGTTTTTAGATGTTATCCGTGCTGCTGAAGATGGCAATGTTTACCATGACTTGGTGAAATACTTGCTAATGGTAAGGCAGAAAGCTAAAGAACCCAAGGTCGACAGTGAGCTCATTTATGCCTATGCAAAGATTGATAGGCTGAGTGACATTGAGGAATTCATTCTTATGCCAAATGTTGCTAATCTTCAAAATGTTGGTGACCGGTTGTATGATGAAGCATTATATGAGGCTGCGAAAATCATATTTGCTTTTATATCTAACTGGGCCAAGTTGGCTATCACACTGGTAAAATTAAAACAGTTTCAAGGTGCTGTTGATGCAGCAAGGAAAGCTAATAGTTCGAAGACATGGAAGGAAGTTTGCTTTGCTTGTGTTGATGCAGAGGAGTTCCGTTTGGCACAGATTTGTGGGCTCAACATTATTATTCAGGTGGATGACTTGGAAGAAGTCAGTGAATATTACCAAAATAGAGGTTGTTTCAATGAGCTAATATCTCTAATGGAGAGTGGTTTAGGGTTAGAACGTGCTCATATGGGCATCTTTACCGAGTTAGGAGTTCTGTATGCTAGATATCGCCCCGAGAAGCTTATGGAGCATATCAAGCTATTCTCAACCCGCCTCAATATTCCTAAACTCATACGAGCTTGCGATGAACAACAGCATTGGAAAGAATTGACCTATTTGTATATACAATATGATGAGTTTGATAATGCTGCAACTACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAATTCAAAGATGTTGTAGTCAAAGTTGCTAATGTGGAGTTGTATTACAAGGCTGTTCATTTCTACTTGGAAGAGCATCCAGATCTTATCAATGATGTTCTGAATGTTCTTGCACTTCGTGTGGACCACGCACGGGTTGTTGACATCATGCGGAAGGCTGGTCACCTTCGTCTTGTGAAACCATACATGGTTGCAGTTCAAAGCAACAATGTATCTGCTGTTAACGAAGCTTTGAATGAGATATATGTTGAGGAGGAAGATTATGATAGATTGCGTGAGTCAATTGATTTGCACGATAACTTTGACCAAATTGGCCTTGCTCAAAAGATTGAAAAACATGAGCTTCTTGAGATGAGACGAGTTGCTGCTTATATTTACAAGAAGGCAGGTAGGTGGAAGCAGTCTATTGCTTTGTCAAAGAAGGATAACCTTTACAAAGATGCCATGGAGACAGCCTCACAATCTGGCGAGCGTGAACTTGCTGAGGAGTTACTTGTTTATTTCATTGATCAGGGAAAGAAGGAATGCTTTGCCTCATGTCTATTTGTTTGCTACGATTTGATACGGGCAGACATTGTTCTTGAACTAGCTTGGATGCACAATATGATTGACTTTGCCTTCCCATATCTATTGCAGTTTATTCGTGAGTACACCGGCAAAGTTGATGAACTAGTGAAGGAAAAAATTGAGACACAAAATGAAGTCAAGGCTAAAGAACAAGAAGAGAAGGAAGTAGTTGCACAACAGAACATGTATGCCCAATTGTTGCCTCTTGCTTTGCCTGCACCACCGATGCCTGGAATGGGAGGCCCTCCGGGTATGGGAGGAGGCTTTGCTCCTCCCCCTCCAATGGGTGGATTGGGGATGCCCCCAATGCCACCTTATGGCATGCCACCCATGGGCAGCAGTTATTGACACGTGTGCAATCGTGGCAAGTATAGCATGAACTCGGCCCCTACGAAGAGCAATATAGAAACTTTGAAGTTTTGCGTACAATATCTCGTGTGATTTGGATGCAGCATTCTTTCTTTGCTTATGGTGGCGTTGGGAGATTCCAAGTTAAAATAATGTGAAGTTTCTGTTTAGATTGTGTCATAATAGTCGTGTAAGTTTATTGTTTTTCTGGGTTGTAATTGAGGCATTTTTTTGGGCTGCTGGTTCGAGCTAATCGATAAATTTCTGTATTCTACCATTTTTCTTGTATTAAATGAATTAGTCCTAGGTAGAACAAACCAAAAATGAATCACTCCTAGTGTATACGAAATTTACCGACTTTAACAGCCGGCTTGTTATGTGCATGTCGTGACCTAAATTTCCGCACTTGCTATAGAAACTACCTAATCAAATCCTGTTTGCTTTGCTGCTTCTCATA | 5832 | 0.4165 | MAAANAPITMKEALTLPSVGISTQFITFTHVTMESDKYICVRETSPQNSVVIVDMNMPNQPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWITPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWPQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKVPGNENPSVLISFASKTLNAGQVISKLHVIELGAQPDFADDFPVSMQISHKYNLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVSLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPETVAKFQSVPVQAGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQLLLPATLLLVRFVGAVNFALMMSQMEGGSPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQSKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLANLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFRSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDNELINVTNKNSLFKLQARYVVERMDTDLWAKVLDPDNEYRRQLIDQVVSTALPESSSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEMAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLDVIRAAEDGNVYHDLVKYLLMVRQKAKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLKQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLEEHPDLINDVLNVLALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGERELAEELLVYFIDQGKKECFASCLFVCYDLIRADIVLELAWMHNMIDFAFPYLLQFIREYTGKVDELVKEKIETQNEVKAKEQEEKEVVAQQNMYAQLLPLALPAPPMPGMGGPPGMGGGFAPPPPMGGLGMPPMPPYGMPPMGSSY | 1691 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste8g01168 | 1691 | SUPERFAMILY | ARM repeat | 1180 | 1515 | IPR016024 | - | |
| Pste8g01168 | 1691 | Coils | Coil | 1461 | 1481 | - | - | |
| Pste8g01168 | 1691 | SUPERFAMILY | ARM repeat | 316 | 471 | IPR016024 | - | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 1272 | 1418 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Clathrin propeller repeat | 20 | 56 | IPR022365 | - | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 1126 | 1267 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Gene3D | - | 1526 | 1622 | - | - | |
| Pste8g01168 | 1691 | Pfam | Clathrin, heavy-chain linker | 315 | 338 | IPR015348 | GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132 | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 684 | 826 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | FunFam | Clathrin heavy chain | 1 | 348 | - | - | |
| Pste8g01168 | 1691 | FunFam | Clathrin heavy chain | 1181 | 1520 | - | - | |
| Pste8g01168 | 1691 | Pfam | Clathrin-H-link | 340 | 405 | - | - | |
| Pste8g01168 | 1691 | FunFam | Clathrin heavy chain | 1038 | 1180 | - | - | |
| Pste8g01168 | 1691 | PANTHER | CLATHRIN HEAVY CHAIN RELATED | 4 | 1482 | - | - | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 535 | 677 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 831 | 970 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 684 | 826 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 1126 | 1267 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 1272 | 1418 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 977 | 1122 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | SMART | CLH_2 | 1421 | 1580 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Gene3D | Tetratricopeptide repeat domain | 886 | 1041 | IPR011990 | GO:0005515 | |
| Pste8g01168 | 1691 | Gene3D | Tetratricopeptide repeat domain | 1181 | 1520 | IPR011990 | GO:0005515 | |
| Pste8g01168 | 1691 | Gene3D | Tetratricopeptide repeat domain | 1042 | 1180 | IPR011990 | GO:0005515 | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 1421 | 1564 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 977 | 1122 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Coils | Coil | 1601 | 1628 | - | - | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 834 | 967 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 1131 | 1265 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 1276 | 1415 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 977 | 1115 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 1424 | 1563 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 539 | 674 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | Pfam | Region in Clathrin and VPS | 685 | 824 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | FunFam | Clathrin heavy chain | 1526 | 1622 | - | - | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 831 | 970 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | ProSiteProfiles | Clathrin heavy-chain (CHCR) repeat profile. | 535 | 681 | IPR000547 | GO:0006886|GO:0016192 | |
| Pste8g01168 | 1691 | FunFam | Clathrin heavy chain | 886 | 1037 | - | - | |
| Pste8g01168 | 1691 | Gene3D | - | 1 | 348 | IPR016025 | GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132 | |
| Pste8g01168 | 1691 | SUPERFAMILY | ARM repeat | 428 | 777 | IPR016024 | - | |
| Pste8g01168 | 1691 | PIRSF | CHC | 3 | 1669 | IPR016341 | GO:0016192|GO:0032051|GO:0071439 | |
| Pste8g01168 | 1691 | SUPERFAMILY | Clathrin heavy-chain terminal domain | 5 | 314 | IPR016025 | GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132 | |
| Pste8g01168 | 1691 | SUPERFAMILY | ARM repeat | 1037 | 1179 | IPR016024 | - | |
| Pste8g01168 | 1691 | SUPERFAMILY | ARM repeat | 885 | 1051 | IPR016024 | - | |
| Pste8g01168 | 1691 | FunFam | Clathrin heavy chain | 430 | 771 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste8g01168 | Pste-Chr8 | 6150891 | 6166875 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste7g02211 | 7 | 20457976 | 20470523 | Pste8g01168 | 8 | 6150891 | 6166875 | ECH | |
| Pste8g01168 | 8 | 6150891 | 6166875 | Pste8g01168 | 8 | 6150891 | 6166875 | ECH | |
| Pste7g02211 | 7 | 20457976 | 20470523 | Pste8g01168 | 8 | 6150891 | 6166875 | PCT |