Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01113 TGTTTATTGCTAACACTAAGAGTTATGGAAGCTCTCAAGACCATCTTCTTATCCCTTTTTGCTGTCTTAGCTGCAGTACTGTATTCAGCCAATGCCAAAATCCAGGAGCATGAGTTTGTTATTCAAGCAACGCCAGTGAAGAGGCTGTGCAACACACAGAGTAGCATCACAGTGAATGGACAATTCCCTGGCCCAACATTGGAAGTCAACAATGGAGACACTTTGGTGGTCAAAGTCACTAACAAAGCTCGTTACAATATCACCATTCACTGGCATGGTATTCGGCAAATGAGAACAGGATGGGCTGATGGACCAGAATTTGTGACTCAGTGTCCTATTCGTCCCGGAGGAAGTTACACGTATCGTTTTACCATTGAAGGACAAGAAGGCACACTTTGGTGGCACGCTCATAGCTCATGGCTAAGAGCCACTGTTTATGGTGCTTTAATCATTCACCCCAAGGAGGGAGAGGCGTATCCTTTCCCCAAGCCAAAACGCGAGTCATCAATTCTTCTAGGGGAGTGGTGGGACGCAAACCCGATCGATGTTCTGAGACAAGCCCAACAAACAGGAGCAGCGCCCAATATTTCTGATGCATACACCATCAATGGTCAACCTGGCGATCTTTACAAGTGCTCTACCCAAGGGACGAGTATTGTTCCGATAGATTCTGGTGAGACAAACCTCTTGAGGGTGATAAACGCGGCACTGAACCAACCCCTATTCTTCTCAATTGCCAACCACAAACTGAGAGTGGTTGGTGCAGATGCTGCGTACCTTAAACCCTTCACCACCAACGTCATCATGTTGGGACCAGGCCAAACCACCGATGTCCTCATCCAAGGTGACCAACCACCCTCACGTTACTACATGGCCGCACGTGCCTACCAATCCGCACAAAACGCTCCTTTTGACAACACCACCACCACAGCCATTCTCCAATACAAATCAGCACCATGTCCTGCAAAGGGTTCCTCAATCAAACCCGTTATGCCCTCTCTCCCAGCTTACAACGACACCAACACCGTCACTGCATTCTCTAAAAGCTTCAGAAGTCTCAGAAAAGCTGAAGTCCCTACAGAAGTTGACGACACTCTCTTCTTCACCATTGGCCTTGGACTCAACAATTGCCCTCCAAATTTCAGTGCAAACCAATGCCAAGGTCCCAATGGAACACGCTTCACTGCCAGCATGAACAATGTCTCCTTTGTTCTCCCCAACAACGTTTCCATTTTGCAGGCTCATCACCTTGGAGTGCAGGGAGTGTTCACCACTGATTTTCCTACGCAGCCTCCTGTCAAATTTGATTATACTGGTAATGTCAGTCGTTCACTGTGGCAACCTGTTCCCGGGACTAAAGTGACCAAGTTGAAGTTTGGATCCAGGGTGCAGATTGTGTTGCAGGATACTAGCATTGTCACCCCTGAGAACCACCCCATTCACCTTCATGGCTATGATTTCTACATTGTCGCTGAAGGGTTTGGAAATTTTGACCCCAAGAAAGATACTTCTAAGTTCAACCTTGTTGACCCACCTATGAGGAACACTGTGGCAGTCCCCGTGAATGGATGGTCAGTTATCAGATTTGTTGCTGACAACCCAGGTGCTTGGATTATGCATTGTCACTTGGATGTTCACATCGGGTGGGGATTGGCGACTGTGCTCTTGGTGGATAATGGAGTAGGCTTGTTGCAATCCATAGAGTCCCCTCCAGAGGACCTGCCTCTATGTTAGGATAATCAAAATCAAAATTATTGAATTTGTTACTATAGCTCGAAAATTTTCCTAGTTCATTGTTGTTTCCCTGTATTGGGGGTATTTCCCTTTAGTTCTGTTTTCTTGTTATTTTCATAGAGATGACCGGGTTTAAAAAAAGAGGGTGGTTGATTTCAACACAGAATGCCATCTGATACGGTCACAAGCCCGACTGATTAAATTGATGTTAGTTGTTTCCTTTCCCCTGTGGCCTGTGGTTAATGTTACGAAGAAAGATAATTTTGACTGTGT 2007 0.4619 CLLLTLRVMEALKTIFLSLFAVLAAVLYSANAKIQEHEFVIQATPVKRLCNTQSSITVNGQFPGPTLEVNNGDTLVVKVTNKARYNITIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIEGQEGTLWWHAHSSWLRATVYGALIIHPKEGEAYPFPKPKRESSILLGEWWDANPIDVLRQAQQTGAAPNISDAYTINGQPGDLYKCSTQGTSIVPIDSGETNLLRVINAALNQPLFFSIANHKLRVVGADAAYLKPFTTNVIMLGPGQTTDVLIQGDQPPSRYYMAARAYQSAQNAPFDNTTTTAILQYKSAPCPAKGSSIKPVMPSLPAYNDTNTVTAFSKSFRSLRKAEVPTEVDDTLFFTIGLGLNNCPPNFSANQCQGPNGTRFTASMNNVSFVLPNNVSILQAHHLGVQGVFTTDFPTQPPVKFDYTGNVSRSLWQPVPGTKVTKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDTSKFNLVDPPMRNTVAVPVNGWSVIRFVADNPGAWIMHCHLDVHIGWGLATVLLVDNGVGLLQSIESPPEDLPLC 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01113 577 FunFam Laccase 165 356 - -
Pste8g01113 577 ProSitePatterns Multicopper oxidases signature 1. 535 555 IPR033138 -
Pste8g01113 577 SUPERFAMILY Cupredoxins 357 577 IPR008972 -
Pste8g01113 577 CDD CuRO_3_LCC_plant 422 560 IPR034289 GO:0005507
Pste8g01113 577 FunFam Laccase 23 153 - -
Pste8g01113 577 SUPERFAMILY Cupredoxins 30 180 IPR008972 -
Pste8g01113 577 Pfam Multicopper oxidase 169 317 IPR001117 -
Pste8g01113 577 Gene3D - 35 163 IPR008972 -
Pste8g01113 577 Pfam Multicopper oxidase 427 559 IPR011706 GO:0005507|GO:0016491
Pste8g01113 577 CDD CuRO_2_LCC_plant 170 315 IPR034285 -
Pste8g01113 577 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Pste8g01113 577 SUPERFAMILY Cupredoxins 161 352 IPR008972 -
Pste8g01113 577 PANTHER MULTI-COPPER OXIDASE 32 562 IPR045087 -
Pste8g01113 577 ProSitePatterns Multicopper oxidases signature 2. 540 551 IPR002355 GO:0005507
Pste8g01113 577 Gene3D - 165 356 IPR008972 -
Pste8g01113 577 Gene3D - 380 577 IPR008972 -
Pste8g01113 577 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Pste8g01113 577 NCBIfam laccase 32 577 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01113 Pste-Chr8 5796230 5799972 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02251 7 20841772 20844963 Pste8g01113 8 5796230 5799972 PCT