Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01093 AATTAAATTAAATTTTATAATAATGGGGATTTTTGAGTGGGAAATTGACGATTGGGCCCAATGAGTGCGAAACAGAAGCCTTTCCTATTTCATTTTTGTTCGAGTTAGGTGAAGAATAGTATCTTGGAAATATTAATCATCATCTGTGAAGATTGCATGAAAGAAGGATAATTGATCCAAAGATGGGCGATCATCTGGCCAGAGCCCAGGACTTGGAGAACAAGGCAGACAAGAAACTGAGCGGTTGGGGTTTGTTTGGTTCCAAATTCGAGGACGCTGCTGATCTCTTCGACAAATCCGCCAATTCCTATAAGCTCGCTAAATCATGGGACAAAGCAGGATCCACCTATATCAAATTGGCCAATTGCCATTTGAAGTTGGAAAGCAAGCATGAAGCTGCCCAAGCTTATGTTGACGCTGCGCATTGCTATAAAAAAACTAATGTAACTGAGTCTGCATCTTGCTTAGACAATGCTGTAAATATTTACTGCGAGATTGGAAGACTCTCTATGGCTGCTAGATATTTGAAGGAAATTGCTGAGTTGTATGAGTCAGAACAGAATATTGAGCAGGCTGTTGTTTACTATGAAAAATCCGCTGATTTTTATGAAAATGAAGAAGTAAACACTTCTGCAAACCAGTGCAAGCAAAAAGTTGCCCAATACTCTGCCCAGCTGGAACAATATCAGAGATCAATTGAGATTTATGAAGATATTGCCCGCCAATCTCTCAACAATAATTTGCTGAAGTATGGAGTTAAAGGGCATCTTCTTAATGCTGGCATTTGCCAACTTTGTAAAGGGGATGTTATTGCTATTACCAATGCATTGGAGCGATATCAGGAATTGGATCCAACTTTTTCAGGAACACGTGAATATAGACTTCTAGCTGATATTGCTGCTGCAATTGATGAAGAAGATGTTGAAAAGTTTACTGAAGTTATCAAGGAATTTGATAGCATGACCCCTCTGGATTCTTGGAAGACAACTCTTCTCTTGAGGGTGAAGGAAAAACTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTGAATTGCATTCTACTCTTCTTTCGGTTTGATTTCACGTTTGATGATTTATCGTCTTGTAATGCTTATTTGTCCAGTTGTTCATCTTACTGCTAATATAAAGGGTACTTGCTTTGGGTTTCAATTGAAGTGATCTGCATGAATTCTTGAAATGAATATTTTGAGGTAGCTAGAGCTTAGAGTCTGATCTGATCCGATTTTATTGGATCTGCATATCCCGGCGAGTTTTCAG 1280 0.3883 MGDHLARAQDLENKADKKLSGWGLFGSKFEDAADLFDKSANSYKLAKSWDKAGSTYIKLANCHLKLESKHEAAQAYVDAAHCYKKTNVTESASCLDNAVNIYCEIGRLSMAARYLKEIAELYESEQNIEQAVVYYEKSADFYENEEVNTSANQCKQKVAQYSAQLEQYQRSIEIYEDIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVIAITNALERYQELDPTFSGTREYRLLADIAAAIDEEDVEKFTEVIKEFDSMTPLDSWKTTLLLRVKEKLKAKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01093 289 Gene3D Tetratricopeptide repeat domain 6 288 IPR011990 GO:0005515
Pste8g01093 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Pste8g01093 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Pste8g01093 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Pste8g01093 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Pste8g01093 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
Pste8g01093 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Pste8g01093 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Pste8g01093 289 SUPERFAMILY TPR-like 7 280 IPR011990 GO:0005515
Pste8g01093 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 8 279 IPR000744 GO:0006886
Pste8g01093 289 SMART tpr_5 112 145 IPR019734 GO:0005515
Pste8g01093 289 SMART tpr_5 53 86 IPR019734 GO:0005515
Pste8g01093 289 FunFam Alpha-soluble NSF attachment protein-like 6 285 - -
Pste8g01093 289 Coils Coil 151 185 - -
Pste8g01093 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Pste8g01093 289 CDD SNAP 7 278 IPR000744 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01093 Pste-Chr8 5695162 5698946 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02265 7 20956403 20964249 Pste8g01093 8 5695162 5698946 ECH
Pste8g01093 8 5695162 5698946 Pste8g01093 8 5695162 5698946 ECH
Pste7g02265 7 20956403 20964249 Pste8g01093 8 5695162 5698946 PCT