Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00960 ATGGGGAGAAAGAGTGAAGAAAGAGAGGGAGAGGAAGTAGCAGGGGATGTGGCTGAGTACACGCTGGAAGGAAGATGGGAAAAGGTAAGGGAGTTGTATGAGGAGTACCCAGAATGTCACGAGGCAAAGATTGATGGGTTGGGAACGGCACTGCACGTGGCCATAGACTTGAACGAAGAACAAGTGGTGGAGAAGCTTGTGAATGCCATTGTGATGAATGAAGATAATTATGATAATGGTGAGATAAGGGCTCTGAAAATGAAGAACGAGCGTGGAGATACCCCTCTTCACGTTGCTGCTTCCAGAGGTTTTGCCAGAATATGTAAGTTGATCATAGGCCCCAACAAACAAAGGGTTTATTTGGCCACTAGGAAAAACTATCATCAAGAAACGCCTCTCTTTCAAGCTGCTATCAACTGGCACAAACAGGCCTTTGCTTATCTCTCTTCCATTTCCGAACACACTGCCATCTTGGAGGATCTTACGCGACTTAATGGCGACACTATTCTTCACTGTGCCATCAGGAATGAATACTTCGATTTGGCTTTGATAATAGTGCATTATTATGATCAACTCATCCAGCACAAGAATGATGACCAATTAACTCCTCTCACACTCCTTGCTACTAGGCCCTCCGCCTTCGGAAGTGGTAACAATTTTTCATGGTGGAAGCGAATCCTCTACCACTGTAACTATTCTCGCTTTTACTTTATTATCTTAATCTTCAAGCTCAATTTTATTTACTTTAATCACCTTTCACATCAAATAAAATACATTTTCACGCAACACAATGCTAGTATCTTCTACTTTCGGATTTATATCAACTGAGATACTGTTTGTTTACCCTTACAATTTGTCATCACAAAGGAGGGATCAACATCAATAGTGTTTTTTTCTTTTCTTCCTAGTGGTTACTCGCCACCCATACTTTTTTATTGAATAAATATTTGTTCTATGTGTA 961 0.4089 MGRKSEEREGEEVAGDVAEYTLEGRWEKVRELYEEYPECHEAKIDGLGTALHVAIDLNEEQVVEKLVNAIVMNEDNYDNGEIRALKMKNERGDTPLHVAASRGFARICKLIIGPNKQRVYLATRKNYHQETPLFQAAINWHKQAFAYLSSISEHTAILEDLTRLNGDTILHCAIRNEYFDLALIIVHYYDQLIQHKNDDQLTPLTLLATRPSAFGSGNNFSWWKRILYHCNYSRFYFIILIFKLNFIYFNHLSHQIKYIFTQHNASIFYFRIYIN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00960 275 Gene3D - 11 228 IPR036770 -
Pste8g00960 275 ProSiteProfiles Ankyrin repeat region circular profile. 91 112 - -
Pste8g00960 275 Pfam Ankyrin repeat 92 115 IPR002110 GO:0005515
Pste8g00960 275 SMART ANK_2a 91 121 IPR002110 GO:0005515
Pste8g00960 275 SMART ANK_2a 46 74 IPR002110 GO:0005515
Pste8g00960 275 SMART ANK_2a 165 193 IPR002110 GO:0005515
Pste8g00960 275 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 22 232 - -
Pste8g00960 275 ProSiteProfiles Ankyrin repeat profile. 91 112 IPR002110 GO:0005515
Pste8g00960 275 SUPERFAMILY Ankyrin repeat 22 208 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00960 Pste-Chr8 4998659 4999701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00960 82 204 Miscellaneous Gene Families AT3G09550 28.455 4.65e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00960 8 4998659 4999701 Pste8g00960 8 4998659 4999701 ECH