Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00584 ATGGCCTCCGAAAATCACCGTCATTTGCAAGGCGTAACGTCAACGCCGGAAGAACTAACGGAACTGGAGGCCGTGATAAAAAAATATCACCGATTCGAGCACTCTTCCAAAACGTGCTTTTCCATAATAACAAACCGGATCGAGGCTCCGGCGAGTGCGGTGTGGCCGTTTGTTAGAAGCTTCGAGAACCCTCAGAAGTATAAGCACTTCATAAAAGGGTGCAAGATGAAAGGGGACGGTGGTGTGGGAAGCATAAGAGAAGTAACCGTGGTTTCGGGGCTTCCCGCGTCCACAAGCACAGAGAGGCTCGAGATTTTGGACGATGACAAACACGTCCTAAGCTTTAGGGTCGTTGGCGGCGAGCATCGACTCAAAAACTATCATTCCGTCACGTCCGTTAACGAGTTCAACAAAGAGGGTAAGGTTTATACCATTGTGTTAGAGTCGTATATCGTAGACATACCCCAAGGGAATACGGAGGAAGATACCAAGATGTTTGTTGACACCGTCGTCAAACTCAACCTTCAGAAACTTGGGGTCGTGGCCGTGGCTTCGTTAATGCAAGGACAATAA 573 0.4852 MASENHRHLQGVTSTPEELTELEAVIKKYHRFEHSSKTCFSIITNRIEAPASAVWPFVRSFENPQKYKHFIKGCKMKGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLKNYHSVTSVNEFNKEGKVYTIVLESYIVDIPQGNTEEDTKMFVDTVVKLNLQKLGVVAVASLMQGQ 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00584 190 SUPERFAMILY Bet v1-like 43 178 - -
Pste8g00584 190 CDD PYR_PYL_RCAR_like 46 178 - -
Pste8g00584 190 Pfam Polyketide cyclase / dehydrase and lipid transport 46 178 IPR019587 -
Pste8g00584 190 PANTHER - 43 179 - -
Pste8g00584 190 Gene3D - 2 190 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00584 Pste-Chr8 3013863 3014435 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01826 6 8372547 8376512 Pste8g00584 8 3013863 3014435 ECH
Pste8g00584 8 3013863 3014435 Pste8g00584 8 3013863 3014435 ECH