Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00562 CATCCGTTTGATTTGTCTGAGTGGGGACACATTTGTCGATTCCTCGTACATTCTGAATCGTATTTGAATAGCCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCGTTCATTCCCAATTGTCTTGTGCAACAAAAAGTTCTTTTCCCATTCAGGAAGCAGGTTGGAGGAACTATATTGGCTGCAAAACTTGCAAAGGAGAAAGGATGGACCATTAATGTAGGAGGAGGTTTTCATCACTTCTCTGCAGAAAAAGAAGGTGGATTCTGTGCTTATGCAGATATTTCTCTCTGCATCCACTTTGCTTTTGTTCGGTTGAATAGGTCAAGAGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTATGACAGTATGTACAAGGAAACGATTGTTCCAGTGTTTGACTTGGTTGCCGGGCGTAGGTTTAATCCTGAGTTGGTAATTTATAATGCAGGAACCGACATTCTAGAGGGTGATCTATTAGGAAGGTTGAAGATTAGTGCCGATGGAATTGCCCTTAGAGATGAGAAAGTTTTCCGGCTTGCTCGTGACAAGGACATTCTATCGTCATGCTCACTTCAGGTTTGCTATTGTTTTCCTTTCTATCATGATTGCTACTATGGCCTTTTTTTTGCACAGGAAACTTACTTGACCAATCATATATTGATATTTTTTTTTTTAATTCTTGTCTGTGCATTTCACTCATTCAATAGTCAATCTTTGAAAGAAATGCTTGATAGAAACAAGCGGAGCTCTAACGGCTACCTAAAGGAAATTGTTACCCAAGTGCCGAAAGTAAAATTCCCGCTCAGAGCTTCCATGAATGGGAGTAACAAATGGAGGGCAAAGGGCAATGTCCCCGCATCACCACCAACCTCACTTCTGGCGCACGCACCAGATAGGAGCCCTCCTTCTCGTCGCCACCACCTTCTTATTCGCCGGACTTCTCACTCCGTGCACCCTATCCACCCACACATCGCAATCACAACAACCGCAGTTCTCTCCATCAAGATCTATGTCTACCAACTCGACGAAATCAACGGCTTAAAGAGCTCTTCTACCGAAGGGAAGGTGAAAATACACAAATTGCTTCTGGAATCCAAACAACTGGAAGCTGATCTGTTCTTCGTTCCATCGTATGTCAAGTGTGCACGCATGTTGGGTGGCCTTAATGACAAAGAAATTAACCATACCTATGTCAAATCAAATGCAGGGGGGATCGCACTGATGAGAGATATACGACTGGCTTTAATACATGGAAAAAAATATAATCATCCTTGTAATATTGATGATGGCATGACTAAAACTTGGGATAGGAGTTTTCAAAGCAGTTTCCAAGGATTGTCCCATTCACATGGAGTACAAATTCAGAAAGGCCCAACAAGAGGTGCTTTAAATAGCCACCAACAAGAGGTGTTTGTCATGACTTCCAGTTCTGTTCAGAAGATGCTATGCTGCCAGGTTCTTAGTTATTACTATTCTTTTATGATAAATAAAAGGTTATTAGTCAAATGCCCTATTTTTGGTTATCTGGAGGCCGCAATCACAACTTTGTTTTCCCCTGCTAAAAAGGGTGGAGCTAGGGCTCACTTTTTCAAATCATGGGCAACTTATATAAATCGTTCCATTATTCTTACCCCGGAGGGGGATCGCACTGATAAGAGAGATACCACTGCCTTTAATACATGGAAAGATATAATCAGTCCTGGTAATATTGATGATGGTATGACTAAAACTGGGGATAGGGTGGTCCAGCATTTGCCTCTGTCAAGACAAAAGCACTTAGCCAATTATTTGGGACGTGCACAAGGAAAAGCTGGTCGTCTTAAGCTTAGAGCTTTCAAAGCAGGGGATCGCACTGATAAGAGAGATACGACTGCCTTTAATACATGGAAAGATATAATCAGTCCTGGTAATATTGATGATGGTATGACTAAAACTGGGGATAGGGACGTGCATAAGGAAAAGCTAGCCGTCTTAATCTTAAGAGTTTTCAAAGTAGTTTCC 2046 0.4189 HPFDLSEWGHICRFLVHSESYLNSLKESSKVAMIVEVPPVAFIPNCLVQQKVLFPFRKQVGGTILAAKLAKEKGWTINVGGGFHHFSAEKEGGFCAYADISLCIHFAFVRLNRSRVMIIDLDAHQGNGHEMDFAYDSMYKETIVPVFDLVAGRRFNPELVIYNAGTDILEGDLLGRLKISADGIALRDEKVFRLARDKDILSSCSLQVCYCFPFYHDCYYGLFFAQETYLTNHILIFFFLILVCAFHSFNSQSLKEMLDRNKRSSNGYLKEIVTQVPKVKFPLRASMNGSNKWRAKGNVPASPPTSLLAHAPDRSPPSRRHHLLIRRTSHSVHPIHPHIAITTTAVLSIKIYVYQLDEINGLKSSSTEGKVKIHKLLLESKQLEADLFFVPSYVKCARMLGGLNDKEINHTYVKSNAGGIALMRDIRLALIHGKKYNHPCNIDDGMTKTWDRSFQSSFQGLSHSHGVQIQKGPTRGALNSHQQEVFVMTSSSVQKMLCCQVLSYYYSFMINKRLLVKCPIFGYLEAAITTLFSPAKKGGARAHFFKSWATYINRSIILTPEGDRTDKRDTTAFNTWKDIISPGNIDDGMTKTGDRVVQHLPLSRQKHLANYLGRAQGKAGRLKLRAFKAGDRTDKRDTTAFNTWKDIISPGNIDDGMTKTGDRDVHKEKLAVLILRVFKVVS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00562 682 PANTHER HISTONE DEACETYLASE 2-RELATED 15 138 - -
Pste8g00562 682 Gene3D Histone deacetylase domain 11 135 IPR037138 -
Pste8g00562 682 MobiDBLite consensus disorder prediction 291 319 - -
Pste8g00562 682 Pfam Histone deacetylase domain 15 136 IPR023801 -
Pste8g00562 682 Gene3D Histone deacetylase domain 136 209 IPR037138 -
Pste8g00562 682 PRINTS Histone deacetylase superfamily signature 81 104 IPR000286 -
Pste8g00562 682 PRINTS Histone deacetylase superfamily signature 157 167 IPR000286 -
Pste8g00562 682 PRINTS Histone deacetylase superfamily signature 115 130 IPR000286 -
Pste8g00562 682 SUPERFAMILY Arginase/deacetylase 15 216 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00562 Pste-Chr8 2899945 2911567 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00562 8 2899945 2911567 Pste8g00562 8 2899945 2911567 ECH