Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00540 TTTTAGTGATCAGAATATCTCTATAGGTACAAAAATTTATTAAAAAGATTTATCATTTTCAACAGATTCTCTTTCACACCCAAGCCTAAATATAGGATTTTAAATCACATATTTAAGAAACAATATTACTGAAACTTGTTTGTATTTGTATTTCTGAATTCCTTAACTAAGGATTAAGGTTTGATTCTAACTTAAAAATACAGTCACAATTACATACACCACTTCAATTCAAAATAAAACTTCCAAATAGGCCAAGTTGATGAGAAAGATAAATTGATTGCCAAATAAAATTTAAAATAACTCCTAATTATACCAATAAATATATATATATATATATATATATATATATGTGTGTGTTCGTATTTTATATTATAATATAGCCTTCAAAGGATTATGTTATCGTCAGCCACAGTTTACACCCCATCTTCACTCACACTCTTCAATGAAATCCTAACAACAGAAAAATAAACAGACCCGAGAGTTCAAGAACCTTTGTTCTCTGTTCTCTCTTTCGTTAGACACCTTTGTTTAGTTTTATTTCATTTTTTGTCTCTGCGTAGCAGCACTCATGGAACGTGCTCGTAGGCTTGCAAACCGTGCCATTCTGAGGCGTCTAGTTTCAGAGGCAAAGCAGCACCAGAAGAATGAATCCGTGTTGCACTCTTCCACCACCCCCATGTTGCTGTACTCTTCCTCCAGGTGCATGTCCTCTGTTTCTTCCCCTGTTGTCCGAAGCAGGGGATCCAAAACAGAGAGCCTTCTTGGAAGGAACATGAGCATCAGCAACATGTCACGCAGTGTAGTTGGTGGCTTCCTCGGTGTTGGTTCCACCCGATCCATCTCGGTTGAAGCTCTTCAACCTAGTGACACTTTTCCAAGGCGCCATAACTCTGCCACCCCAGAGGAACAGAGCAAGATGGCAGAGTCGTGTGGATTTGAGAACCTCGATTCCCTAGTCGACGCGACTGTGCCTAAATCCATTCGCCTGAAGGATATGAAGTTTAGCAAATTCGATGCAGGGTTGACAGAGAGCCAGATGATTGAGCACATGAAGGACTTGGCCTCAAAGAACAAGGTTTTCAAGTCCTACATTGGGATGGGATACTACAATACTCATGTTCCACCAGCGATCTTGAGGAACATAATGGAGAACCCTGCTTGGTACACTCAGTACACCCCTTACCAAGCTGAGATATCTCAGGGGAGGCTTGAGTCACTGCTGAATTACCAAACAATGATCACTGACCTCACTGGCTTGCCTATGTCCAATGCTTCATTGCTTGATGAGGGAACTGCTGCAGCTGAGGCAATGTCTATGTGCAACCACATTCAAAAAGGGAAGAAGAAGACCTTCATCATTGCAAGTAACTGCCACCCTCAGACCATTGATATTTGCAAGACAAGGGCTGCTGGATTTGATCTAAAGGTTGTGACAGCAGATCTTAAGGATATTGATTACAAATCTGGGGATGTGTGTGGTGTGCTTGTACAGTACCCTGGCACTGAGGGTGAGGTGTTGGACTATGGGGAGTTTGTCAAGAAGGCTCATGCACATGAGGTGAAGGTTGTTATGGCAAGTGATTTGTTGGCACTGACTGTGTTGAAGCCTCCTGGTGAGCTGGGGGCAGATATTGTTGTTGGCTCAGCTCAGAGGTTTGGGGTGCCAATGGGGTATGGAGGCCCTCATGCAGCTTTCTTGGCCACTTCACAAGAGTACAAGAGGATGATGCCTGGGAGAATCATTGGGCTGAGTGTTGATTCTTCTGGTAAGACTGCTTTGAGAATGGCAATGCAAACTAGGGAGCAGCATATCAGGAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCATTGCTTGCAAACATGGCTGCCATGTATGCTGTGTATCATGGACCTGAAGGCCTTAAGAACATTGCACAACGTGTTCATGGTCTTGCTGGGGTATTTGCTCTTGGATTGAAGAAACTTGGAACTGTGGAAGTTCAGGACCTTCCCTTCTTTGACACAGTGAAGGTTAAGACTTCCAATGCACATGCAATAGCCGATGCGGCTACCAAAAGTGAAATAAATTTGCGAGTAGTAGATGGAAACACTATCACTGTTGCTTTTGATGAAACAACCACTTTAGAAGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGAAAGCCAGTTTCCTTCACAGCTGCATCTCTTGCGCCAGAAGTTCAGAGTGCGATTCCTTCTGGATTATCTAGGAAGAGCCCTTATCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTTAGGTACATGCATAGGCTACAATCAAAAGATCTTTCTCTATGCCACAGTATGATTCCACTGGGGTCTTGCACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCCAGCTTCACTGATATTCACCCTTTTGCACCAATTGACCAGGCTCAAGGTTATCAGGAAATGTTCGACAATCTGGGTGACCTGTTATGTACCATCACTGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTTCTGGGGAATATGCTGGACTGATGGTTATTCGTGCATATCATTTGGAAATTTATGGTTCTTCTGATTTACTCTTAGGATATGAAAGTTTCTCTGTGGTTATTGAATGTAACAAGCCAATTGTACATAGCCTAAGTAGTGCAAGGGGAGACCATCACCGTAATGTTTGCATTATACCTGTCTCAGCACATGGCACTAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCTCTGTTGGAACTGATGCCAAGGGAAACATTAATATTGAAGAGTTGAGAAAGGCTGCCGAAACACACAAGGACAACTTATCTGCACTTATGGTAACATATCCTTCAACCCACGGTGTTTATGAGGAAGGTATTGATGAAATTTGTAAGATTATTCATGATAATGGAGGCCAAGTATATATGGATGGTGCCAACATGAATGCTCAGGTGGGACTCACAAGCCCAGGCTGGATAGGAGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGTATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTAGCACCGTTTTTACCTTCACACCCTGTGATAGCAACTGGTGGAATTCCTGCCCCTGAGAAACCTCAACCACTTGGTACCATCTCTGCTGCACCATGGGGCTCAGCACTGATATTGCCTATCTCTTACACTTACATAGCCATGATGGGTTCTAACGGACTCACTGATGCATCAAAGATAGCCATTTTGAATGCAAACTACATGGCAAAACGATTGGAGAATTATTACCCGGTCCTTTTCCGCGGAGTCAATGGTACAGTTGCTCATGAATTCATTATTGACTTGAGAGGCTTTAAGAATACTGCTGCAATAGAGCCAGAAGATGTTGCAAAGCGCCTCATGGACTATGGTTTTCATGCACCAACAATGTCATGGCCAGTGCCTGGCACACTCATGATTGAGCCTACTGAGAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCTATTAGACAAGAAATTGCTGAGATTGAGAAAGGAAATGCTGACACGAACAACAATGTACTTAAGGGAGCCCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACAAAACCTTACTCCAGGGAATATGCAGCCTTCCCAGCTCCATGGCTTCGTGTTTCAAAGTTCTGGCCTAGCACAGGACGTGTTGATAATGTGTACGGTGACCGCAACCTCATTTGCACCCTTCTCCCAGCATCACAGGCTGTTGAAGAACAAGCAGCTGCCACTGCCTAGTGTTCCAACTTCCAATGACAACTGTTTTCATTTCCCTTTGTACATAAACTCTCTCTATTCATACAGTTCTCGCTCCTTTTGAATATTGCTTCATCATATGTGATAATGATGATAATCCACTGCTCTTAAGTTTCATCCAACCACAACAACCAAAGTTCCCCCCACTGGGGAAAAAAAGTAATTCTTATAATTGCTGATGCTATTTAATTTTAGGAATGTATTTTAGGCCTACATATTACAGTAATGTGAAAAATGAATTTCATTCATGTAAACAAATTGTAAAAAAAAAAAAAAAATCAGCATTAGTTTCTTTTAATAAAGAATGCAATTGCCATAGCTATGACCACAATGATTTTATACTATTGC 4216 0.4243 MERARRLANRAILRRLVSEAKQHQKNESVLHSSTTPMLLYSSSRCMSSVSSPVVRSRGSKTESLLGRNMSISNMSRSVVGGFLGVGSTRSISVEALQPSDTFPRRHNSATPEEQSKMAESCGFENLDSLVDATVPKSIRLKDMKFSKFDAGLTESQMIEHMKDLASKNKVFKSYIGMGYYNTHVPPAILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNHIQKGKKKTFIIASNCHPQTIDICKTRAAGFDLKVVTADLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFVKKAHAHEVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGLSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKNIAQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKVKTSNAHAIADAATKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEVQSAIPSGLSRKSPYLTHPIFNTYQTEHELLRYMHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPIDQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGASGEYAGLMVIRAYHLEIYGSSDLLLGYESFSVVIECNKPIVHSLSSARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIEELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIATGGIPAPEKPQPLGTISAAPWGSALILPISYTYIAMMGSNGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAAIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNADTNNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRVSKFWPSTGRVDNVYGDRNLICTLLPASQAVEEQAAATA 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00540 1093 Gene3D - 185 445 IPR015421 GO:0003824
Pste8g00540 1093 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 893 1031 - -
Pste8g00540 1093 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 185 445 - -
Pste8g00540 1093 Pfam Glycine cleavage system P-protein 749 855 IPR020581 GO:0004375|GO:0006546
Pste8g00540 1093 Pfam Glycine cleavage system P-protein 105 531 IPR020581 GO:0004375|GO:0006546
Pste8g00540 1093 Coils Coil 752 772 - -
Pste8g00540 1093 FunFam Glycine cleavage system P protein 438 527 - -
Pste8g00540 1093 Gene3D - 613 869 IPR015421 GO:0003824
Pste8g00540 1093 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 88 677 IPR020581 GO:0004375|GO:0006546
Pste8g00540 1093 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 96 1084 IPR003437 GO:0004375|GO:0006544
Pste8g00540 1093 CDD GDC-P 154 531 IPR020581 GO:0004375|GO:0006546
Pste8g00540 1093 SUPERFAMILY PLP-dependent transferases 105 531 IPR015424 -
Pste8g00540 1093 Gene3D Aspartate Aminotransferase, domain 1 174 527 IPR015422 GO:0003824
Pste8g00540 1093 Gene3D Aspartate Aminotransferase, domain 1 892 1031 IPR015422 GO:0003824
Pste8g00540 1093 CDD GDC-P 574 1000 IPR020581 GO:0004375|GO:0006546
Pste8g00540 1093 SUPERFAMILY PLP-dependent transferases 566 1078 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00540 Pste-Chr8 2801629 2808575 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00540 8 2801629 2808575 Pste2g01291 2 14213513 14219785 PCT