Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00440 CTCAAAGTCACTCACCTCACCTCACCCACCCTGATCTGATCCGAACCTGAGGTCCGGGTGGTGACAACCAGGCTCGGACCTGACTGAGCCTCTCGAAAAAGCCAAGACAGACACTCTCGAAAATAATGGAGCCTCCCAAAGCAAAGAAAGAGAGAGAGAGAGAAAGTGAAACAGGGTTTTAGAGAGAGAGAGGAAAAAAAAGAACAGCGATAGATGATGGGTCAGATCGTGCGGAGGAAGAAGAAGGGCCGTCCCTCCAAGGCAGATCTGGCTCGCCGCTCCGGCGAATCTCCGGCAGCCTCGCAGCCCGACCTTCGACGGAGCCGGCGGCGGCGGAATGTGCGCTACAACATCGACTACGACGATTACCTTGACGAGGAGGACGAGGACGAAGAAGAGGACGAGAGGAGGAGAGAGAAGAAAAAGTTGAAGCTTGTGGTGAAGCTGAACAACCACGAGGAGGAAGACGAGGATGAAGAGGACAGCGCGCCGAGTCGCAGAGGGGCGCGTGGAGTTCACGCACCCGATGATAAGGGGGAAGATGATGAGGACGAAGAAGAAGGGGAAGAGGAAGAGGAGGAAGAAGACGAGGGAAATGAGGAGGCGGATGAACCGGAAGAAGAGCGTGAGGTAAAGGGTAGAAAAGTGGATTCCAAAGGGCTCCACTCTGTTCCAGTGTTAGGAACTCCATCTAAGCTTTCTTCTGGGATTCCGTTGCCTGACAAAAGGACCCTGGAATTGATCCTTGACAAGCTTCAGAAGAAGGATACATATGGTGTGTATGCGGAGCCAGTGGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCAATGGACTTTGCCACAGTGAGGAAGAAGTTGGCAAATGGATCGTATCCTACGTTGGAACAATTTGAGAGTGATGTATTTTTGATTTGCTCAAATGCAATGCAATACAATGCGGCGGAGACTATATACCACAAACAGGCACGATCAATACAAGAACTAGCAAGGAAAAAGTTTGAAAAGTTAAGGATTGACTTTGAGCGTTCTCAGAGTGAACTGAAGTCGGAACAAAAGACAAGATCCAATTCCCTGGTTAAGAAGCTAGCAAAGAAGCCTTTGGGTTATGCTTCACAGGAACCTGTTGGATCTGATTTTTCTTCAGGTGCAACTCTTGCTACTATTGGAGATGTACTACCAACATCCCATCAAATGCAAGGTGTTGTATGCGAAAGGCCTAGCAGTATTGATGGGCTTGTGGAGGGAAATGCTTTCTTGATTGATTCAAATCAAGAGAAAGCAGAAGACTATATATCAGGGAGGGGTCTGTTCTCCAAGTTGGGAAGGAAATCATCTACCCAAGATATTGAACGTCGTGCAACTTATAATATGTCCAGTCTACCAGTTAATAGATCAGATTCCATATTTACAACATTTGAGGGTGAAGTTAAGCAGCTAGTTACTGTTGGACTACAAGCTGAATATTCTTATGCCAGGAGTTTGGCTCGTTTTGCTGCAACTCTAGGACCTACTGCTTGGAAAATTGCCTCCCAGAGGATTCAGCAGGCACTGCCACCTGGCTGTAAATTTGGCCGTGGTTGGGTTGGAGAGTATGAACCACTTCCAACCCCAGTATTAAAGCTTGATAATCGTGCTCAGCAACAACCTAATTTGGCGACTATGCCACAGTCTACTAATGAATTAATAAAGGTTGACAAAAATTGTAAGAATGTGGAATCCTCCATGGAACATCCTGTTAATGGACCAATGCATGAGGGAAAGCATCTTTCAGTTTGCTCTAGTAGTGGGCTTACATCCGATGGAAAATCATCTTTGTTTGGTTCTGCTGGACCAAGACCCAATTCTCATGCCAATCTCTTTTATCAGAAGCCTAATGTTCAAACCAGGAACCTCAACAAGTCTGAGAACAAGGGTTTGAAACAAGTGGAATTGAACTCTTTACCCTTGAGTGATCAGAATAATACCAGTCTAGTAACCAAGCTTACAAGTAGTACTCCTGCAGCAACAGCAGTGCCTAAGCCTAGAGAATTGGTACCAAGTAACATTAACATTTTACCGTCTGTGACGTTCAAGCAGCCAGATACTAATGGAGTTGTTAGTGGAGAGTTGTCCAATGGAAAAGTGAGGAATCCTAATTTAAATAGACGGATGACTGGTCCATCATCTGAGAGTACATCAAATCAAACAGGCAGAGCTACTCCCTTTGTTACCCATGGGCAGGAGCAGACTCTTAGTGACCCAGTTCAGTTGATGAGGATGTTAGCTGAAAAGTCACAAAAGCAACAGACTTCTAGTTCGTCCAATCATTCCCCTGTTGACACTCCACCAGTTACACCGTCAGTTCCATCAGTACGGAGGGAAGACTCAAGCAATGCTTCTGCAGCAGCTGCCCGAGCATGGATGTCTGTAGGGGCAGCAGGTTTTAAACAAGGACCTGAAAATTCTAGTTCACCAAAAAATCAGATTTCTGCAGATTCATTATACAATCCAGCCCGAGAGTTCCATCCGCCTTTTTCACGAATTAGGGGAGAGTTTCCTTCTGGTGGAATGGCTTTCCAGTCTGAGAAGAACAATTTTCCATTCCAGGCTCTTGTACCCCAACCTATGCATCCAGTTGGTGTTTCACAGTTTGCAAATCGACCAATGGTTTTCTCTCAAGCATCAGCTTCTGACCTATCAAGATTTCAAATACCAGCTTGGAGAGGTATCCGTCCACCTAATCAACCAAGACAGAAACAGGAAACACTTCCTCCTGACTTGAATATTGGTTTCCAATCTCCTGGGTCTCCTGCAAAACAGTCATCTGGTGTGCTGGTTGACTCCCAGCAACCAGACCTGGCTTTGCAACTATGACATGGCATTGTATTTCCGGTGTGGATGTTTCCACAAGAATTTGACTGATTATGGAATTTCGGCTCCTGTTGGTTGTCAATTTTGATAAAAAAAAGCCTTGCATAGATGAGGATAAGGCTACCATTTTCTACTTTTGGAAGAGATGAAATGGTTACCGTGTGCTTGGGAATATTGTTTTCCCTAGGATGCTTATGTTGGGAATTTTATGGTTTTCTTAAGTAGGATTTGGCACAAAGTAAATCCAAATGAGTTTGCTTAGTTTCAGAAGACTTGGATGGATTTAGCAGAACACAACTTCACAACTTTCCATCTTTTCCAGATGAGGATTACCGAGTAAATGGAGCATGTCTGTGTTTCTATCCTGGAGTTAAAACCATGTAAAGCCTTTAGGAGTCGATCATGATCAAGCGTTACTTAGATTTTTCAATTAGCGGGCCAAAAATCCTGTTGATGATGCCTTGTACATTCTTTACAAATGGTTGAAATTCGGTTGCCTAGATATTGATTTTCATTAGATGATTACTTGTTTATCTGGATTGATGGGAAGGCATAACTTCTTAGTTCTTAATGCTGCTATTATTCTGTACATGTCTCCAATGCAATACCTCAACATGCTTTTCCTTGTTTTACCTGA 3499 0.4444 MMGQIVRRKKKGRPSKADLARRSGESPAASQPDLRRSRRRRNVRYNIDYDDYLDEEDEDEEEDERRREKKKLKLVVKLNNHEEEDEDEEDSAPSRRGARGVHAPDDKGEDDEDEEEGEEEEEEEDEGNEEADEPEEEREVKGRKVDSKGLHSVPVLGTPSKLSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFESDVFLICSNAMQYNAAETIYHKQARSIQELARKKFEKLRIDFERSQSELKSEQKTRSNSLVKKLAKKPLGYASQEPVGSDFSSGATLATIGDVLPTSHQMQGVVCERPSSIDGLVEGNAFLIDSNQEKAEDYISGRGLFSKLGRKSSTQDIERRATYNMSSLPVNRSDSIFTTFEGEVKQLVTVGLQAEYSYARSLARFAATLGPTAWKIASQRIQQALPPGCKFGRGWVGEYEPLPTPVLKLDNRAQQQPNLATMPQSTNELIKVDKNCKNVESSMEHPVNGPMHEGKHLSVCSSSGLTSDGKSSLFGSAGPRPNSHANLFYQKPNVQTRNLNKSENKGLKQVELNSLPLSDQNNTSLVTKLTSSTPAATAVPKPRELVPSNINILPSVTFKQPDTNGVVSGELSNGKVRNPNLNRRMTGPSSESTSNQTGRATPFVTHGQEQTLSDPVQLMRMLAEKSQKQQTSSSSNHSPVDTPPVTPSVPSVRREDSSNASAAAARAWMSVGAAGFKQGPENSSSPKNQISADSLYNPAREFHPPFSRIRGEFPSGGMAFQSEKNNFPFQALVPQPMHPVGVSQFANRPMVFSQASASDLSRFQIPAWRGIRPPNQPRQKQETLPPDLNIGFQSPGSPAKQSSGVLVDSQQPDLALQL 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00440 883 SMART bromo_6 163 271 IPR001487 GO:0005515
Pste8g00440 883 MobiDBLite consensus disorder prediction 1 165 - -
Pste8g00440 883 MobiDBLite consensus disorder prediction 91 106 - -
Pste8g00440 883 MobiDBLite consensus disorder prediction 834 883 - -
Pste8g00440 883 Coils Coil 53 73 - -
Pste8g00440 883 CDD Bromodomain 170 266 - -
Pste8g00440 883 Pfam Bromodomain 176 256 IPR001487 GO:0005515
Pste8g00440 883 MobiDBLite consensus disorder prediction 841 883 - -
Pste8g00440 883 MobiDBLite consensus disorder prediction 625 675 - -
Pste8g00440 883 MobiDBLite consensus disorder prediction 1 16 - -
Pste8g00440 883 SUPERFAMILY Bromodomain 159 269 IPR036427 GO:0005515
Pste8g00440 883 ProSiteProfiles Bromodomain profile. 182 252 IPR001487 GO:0005515
Pste8g00440 883 MobiDBLite consensus disorder prediction 63 81 - -
Pste8g00440 883 MobiDBLite consensus disorder prediction 688 707 - -
Pste8g00440 883 PRINTS Bromodomain signature 215 233 IPR001487 GO:0005515
Pste8g00440 883 PRINTS Bromodomain signature 199 215 IPR001487 GO:0005515
Pste8g00440 883 PRINTS Bromodomain signature 233 252 IPR001487 GO:0005515
Pste8g00440 883 MobiDBLite consensus disorder prediction 688 729 - -
Pste8g00440 883 PANTHER BROMODOMAIN CONTAINING PROTEIN 7 882 - -
Pste8g00440 883 MobiDBLite consensus disorder prediction 107 135 - -
Pste8g00440 883 ProSitePatterns Bromodomain signature. 188 244 IPR018359 -
Pste8g00440 883 Gene3D - 104 291 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00440 Pste-Chr8 2315193 2321867 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00440 8 2315193 2321867 Pste8g00440 8 2315193 2321867 ECH
Pste7g01298 7 11756449 11763311 Pste8g00440 8 2315193 2321867 PCT