Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00427 AAAAATGTTGCAGCGCCTGAGGCAACACCGAAACGATTTTCAGAGCCACAAAGCTGGTCCAACTCCAAAGTGCAATGATCGTCGAGGTTTGAGACGTAGGTTCGGAGGTAGTCGACCGGAGCACAGGCGAGGAGGATTTTAAGCTCGTTCAGCGCTTCCAACCTTGAAGGGAAGTAGTGGAGACCCGCCCGATTTAGCTTGAGCACCAGCTCTTTCTACAAGAGGACCTGTTTGGTTCCACCATCTTCTCCAGGTTTGAATTCCCAAAGAAGAAGAACAGATACCTGACAACGTAATCATGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCCGGCAGCCCGTCTCCTTGGTTGCTAGGTCAGTCAGTTCAGCGAATTCGGTCTGGCCCCTGTGTTTCTGCTAGAGTTTCTTCCACTGTGGAGAAAGAGGATACTGATGATTACTCAACTGTTATTTCTGGAATAGTGTCATATATGCTGTTCTTAGTTCTCCCACAAATAAGGCAATCTTCATATTTATTCCCTCAAAATAAAACCATTGTATTTCATTCAGGTGGCTCTAGATTTGTCAGAAACTTCAGTAATATAACACCTGGATGCTGGATTAATTCGAAGCCTATGAGGGTGGTTTTTCATCCAGAGACAACCATTCGAACATGGGGACGTCCATTTTCTTCAGAAAGTGGTGACACAGTTGATGTTGTGGTCCCTCCTCTCGCTGAATCTATCTCTGATGGAACTCTGGCAAAATTTTTGAAGAGGGCTGGTGACAAGGTTAATATTGATGAGCCAATTGCTCAAATTGAAACAGATAAGGTGACAATTGATGTTTCAAGTCCCGAGTCAGGCGTGATTGTGAAGCTTCTAGCCAATGAAGGGGATACTGTTGAGCCAGGTAACAAGATAGCAATCATTTCAAGGTCTGCTGATGCTACAACTCATGTTGCCCCATCTGAGACTACATCTGAGAAAGCTGCTTCCCAGCCAACCCAAAAGGTTAGCGAGGAGAAGAAAGAACCCAAAGTTGAATCTCCTCCTGCTCAACCTGCACAGAAGCCCAAACTACCTCCTGCTACACTGAGTTCTCCTACCGAGCCTCAGCTTCCTCCTAAAGAAAGAGAAAGACGAGTTCCTATGACAAGGCTTAGGAAACGAGTTGCTACACGGCTGAAGGATTCACAAAACACATTTGCTATGCTGACAACCTTCAATGAAGTTGATATGACTAATTTGATGAAGCTTCGTGCTGATTATAAGGATGCTTTTGTTGAAAAGCATGGAGTCAAATTGGGGCTTATGTCTGGGTTTGTCAAAGCTGCTGTCAATGCACTCCAACATCAGCCTATTGTCAATGCAGTCATTGATGGGGATGATATTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGGGTCTTGTTGTGCCAGTTATACGCAATGCTGATACCATGAACTTTGCTGATATAGAAAAGCAGATCAATGCTTTTGCAAAGAAGGCAAATGATGGAACTTTATCGATTGATGAAATGGCCGGAGGAACTCTTACCATATCCAATGGTGGTGTTTATGGAAGTCTTTTGAGTACCCCAATTATAAACCCACCTCAGTCAGCAATCTTGGGTATGCATTCCATAGTGAGCCGTCCGACAGTTGTTGGAGGAAATATTGTCCCAAGACCAATGATGTACGTTGCTCTAACATATGATCATAGAATTATTGATGGAAGAGAGGCAGTGTTCTTTCTGAGACGCATCAAAGATATTGTTGAGGATCCTCGCAGGCTTCTGCTTGATATTTGAAGTGAAGCCTCTATTTTTAATGGAGTAAATTAAACCTCAAAATTCACATACCATAATGGATACCCTTTTGTTTGGGTTTTGAATTGCGGCTGCCCGTAATTTAATCTGTAATGAGCAAACTCTTTAGGATCATATCCCAATTTCCGTTGGATATTAATTCAGCATGTTTGAGCTTTTTCTACCCACAATTCCTCATTTAATATGATGAGGGTCAGTTTTTGTCTCCGAAATTGTATGAAACGACTAAAAACTATATTGTAGGGATTGTCCTAAAGTAATAATGGGATTTCTTTTCCATGGCACTATATGCTGCAATATATTTTCGCGGGTGA 2142 0.4248 MFGVVRRRVASGSPSPWLLGQSVQRIRSGPCVSARVSSTVEKEDTDDYSTVISGIVSYMLFLVLPQIRQSSYLFPQNKTIVFHSGGSRFVRNFSNITPGCWINSKPMRVVFHPETTIRTWGRPFSSESGDTVDVVVPPLAESISDGTLAKFLKRAGDKVNIDEPIAQIETDKVTIDVSSPESGVIVKLLANEGDTVEPGNKIAIISRSADATTHVAPSETTSEKAASQPTQKVSEEKKEPKVESPPAQPAQKPKLPPATLSSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRADYKDAFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADTMNFADIEKQINAFAKKANDGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNIVPRPMMYVALTYDHRIIDGREAVFFLRRIKDIVEDPRRLLLDI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00427 503 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 273 501 IPR001078 GO:0016746
Pste8g00427 503 Pfam Biotin-requiring enzyme 133 205 IPR000089 -
Pste8g00427 503 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 103 502 - -
Pste8g00427 503 CDD lipoyl_domain 132 205 - -
Pste8g00427 503 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 156 185 IPR003016 -
Pste8g00427 503 MobiDBLite consensus disorder prediction 211 229 - -
Pste8g00427 503 Gene3D - 130 208 - -
Pste8g00427 503 NCBIfam dihydrolipoyllysine-residue succinyltransferase 266 502 IPR006255 GO:0004149|GO:0006099|GO:0045252
Pste8g00427 503 Gene3D - 259 499 IPR023213 -
Pste8g00427 503 MobiDBLite consensus disorder prediction 208 281 - -
Pste8g00427 503 SUPERFAMILY Single hybrid motif 131 222 IPR011053 -
Pste8g00427 503 ProSiteProfiles Biotinyl/lipoyl domain profile. 131 206 IPR000089 -
Pste8g00427 503 SUPERFAMILY CoA-dependent acyltransferases 273 502 - -
Pste8g00427 503 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 266 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00427 Pste-Chr8 2245996 2261383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00427 108 501 Acyl Lipid Metabolism Gene Families AT1G54220 29.004 3.46e-40 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00427 8 2245996 2261383 Pste8g00427 8 2245996 2261383 ECH