Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00403 GAAAAGAAAATGAAAATACGGTGTGGGACAGTGTGCCTGGTTTCTCTGATAACAATATTCTTCCTCCCCCTTTGTGAATCCTTCAACTATAGGGAAGCACTGTCCCAGAGCCTCCTCTATTTCGAGTCACAGCGTTCAGGTCGATTACCCCACAATCAAAGGGTCGATTGGCGTCACCATTCTGCCCTCACGGATGGCCTAGAACAAGGGGTGGACTTGGTCGGAGGCTACTATGATGCAGGGGACAATGTCAAATTTGGCCTACCAATGGCATTCACCGTAACACTCCTCTCATGGGCTGCTATTCAGTACGGACAACAAATCTCCGCTGCCGGCGAGTATGCTCACGCTCTTCAGGCCATCAAGTGGGGCACCGATTATTTCATCAAGGCCCACACACAACCAAATGTTCTTTGGGTTCAGGTGGGTGACGGCGATACTGATCACTACTGTTGGCAGCGGCCGGAGGACATGACAACGTCACGGAGAGCTTACAAGGTTGATGCGAACAACCCCGGGTCGGATGTCGCCGGCGAGACGGCGGCAGCATTGGCAGCGGCGTCCATTTTGTTTAGGAGAACAAACCCACATTACTCTCAACTGCTTCTGCATCATGCACAACAGTTGTTTAAGTTTGGTGACAAGTACAAGGGCAAGTATGATGAGAGTGTTGGAGTGGCTAAAGGTTATTATGCTTCGGTTAGTGGGTACATGGATGAGTTGCTTTGGGCATCCGTTTGGCTATATAGAGCCACCCAAAGGGAGGAATATTTAAGCTATTTTTTGGAAAATGCTTATGACTTTGGTGGGACCACTTGGGCCATCACTGAATTCAGCTGGGATGTTAAATATGCTGGTCTTCAAGCTCTTGCTTCCACGTTTCTTATGGAAGAAAAGAAGCACAAGAAACATGAAGTGATACTGAAACAGTATCGTTCAAAAGCGGAGCACTACCTGTGTGCGTGCCTGAACCTCAACAACGTGAGTAACGTGGAGCGCACCCCAGGAGGGTTACTGTACGTCCGCCAGTGGAACAACATGCAATACGTAGCTACGGCGTCGTTTCTTCTCACTGTCTACTCTGATCATCTGCTAGCCACAGATCAGAAGCTGCATTGCCACAATGGGGATGTGGGCCCCCACGAAGTGTTTGCCTTTGTAAAATCACAGGTTGATTACATCCTGGGTTCAAATCCAATGGGTATGAGCTACTTGGTAGGCTATGGTCCCAATTTCCCGCGGAGGGTGCACCATAGGGGTGCATCTACTGAATCATATGGGGAAAATAAGGGTTTTATTGGGTGTACTCAGGGTTACGATAACTGGTATGGACGCGTTGAACCCAATCCAAATGTCCTCATTGGGGCCCTTGTGGGTGGGCCTGATATCAATGACCAATTTAAAGATGATAGACGAAATTACATTCAGACAGAGGCTTGCACATACAATACCGCAGCACTGGTAGGGGTTTTTGCTAGATTGTATCATGAATACCCTTTTATAGCTTCTAGCTAA 1515 0.4818 EKKMKIRCGTVCLVSLITIFFLPLCESFNYREALSQSLLYFESQRSGRLPHNQRVDWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTVTLLSWAAIQYGQQISAAGEYAHALQAIKWGTDYFIKAHTQPNVLWVQVGDGDTDHYCWQRPEDMTTSRRAYKVDANNPGSDVAGETAAALAAASILFRRTNPHYSQLLLHHAQQLFKFGDKYKGKYDESVGVAKGYYASVSGYMDELLWASVWLYRATQREEYLSYFLENAYDFGGTTWAITEFSWDVKYAGLQALASTFLMEEKKHKKHEVILKQYRSKAEHYLCACLNLNNVSNVERTPGGLLYVRQWNNMQYVATASFLLTVYSDHLLATDQKLHCHNGDVGPHEVFAFVKSQVDYILGSNPMGMSYLVGYGPNFPRRVHHRGASTESYGENKGFIGCTQGYDNWYGRVEPNPNVLIGALVGGPDINDQFKDDRRNYIQTEACTYNTAALVGVFARLYHEYPFIASS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00403 504 FunFam Endoglucanase 26 499 - -
Pste8g00403 504 Pfam Glycosyl hydrolase family 9 30 490 IPR001701 GO:0004553|GO:0005975
Pste8g00403 504 SUPERFAMILY Six-hairpin glycosidases 27 498 IPR008928 GO:0005975
Pste8g00403 504 PANTHER ENDO-1,4-BETA-GLUCANASE 22 495 - -
Pste8g00403 504 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 393 419 IPR018221 -
Pste8g00403 504 Gene3D - 26 497 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00403 Pste-Chr8 2094515 2097659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00403 13 493 Glycoside Hydrolase AT2G32990 72.245 0.0 744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00403 8 2094515 2097659 Pste8g00403 8 2094515 2097659 ECH