Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00400 AAACAGAGCATGCCTTCTCTCACACTCTTCCTCATCCTCATCTCATTCGTTTTTTCATCATCAGAAGCGGGATCCATCGGAATTAACTATGGTAGGATTGCGAACGACCTACCTACGCCGGAGAAAGTGGTGGAACTGCTGAAGAAAGAGGGTTTGAAGCGTGTGAAGCTGTACGACACGGATGCGAGCGTCTTAAGAGCGTTTGCAAAGTCGGGAATGAAGGTGGTGGTGGCCATGCCAAACGAGGTTCTGGGAAAAGCCGCTGCCGACCAGTCCTTCACAGACGCGTGGGTAGAAGCGAATATATCGAGGTACTATCCAGCCACAGAGATCGAAGGCATAGCTGTGGGGAACGAAGTGTTCGTGGACCCAAACAACAGCACCAAGTTCCTTGTAGCAGCCATGAAGAACGTGCACGCCTCTCTAAGAAAGTACAACCTAGAAACAAATATAAAAATCTCTTCACCGATGGCACTTTCGGCGCTGCAGACATCCTTCCCGTCGTCGGCGGGTTCATTCAAAAGCGAACTGGTAGAACCAGTTATTAAACCCATGCTGGATTTACTACGCCAAACAGGATCCTACCTAATGGTCAACGCCTATCCCTTCTTCGCATACGCTGATAACTCGGATAAGATCTCCTTGGACTACGCCCTCTTCAAGGAAAACCCAGGCGTGGTCGATTCCGGTAATGGTTTAAAATACACAAACCTGTTGGACGCTCAAATCGACGCCGTTTTTGCTGCCATGTCGGCGCTTCAATACGACGACGTTAAGATAACTGTCTCGGAAACGGGTTGGCCCTCGGCGGGGGACTCGAAGGAAATTGGAGCAAGCCCGGAGAATGCGGCGCTCTATAACGGGAACTTGGTGCGGCGGGTGTTGACTGGGAGTGGGACTCCCCTGAGGCCCAACGACTCAGTGGACGTGTTCCTCTTCGCGCTTTTTAATGAGAACGAGAAAACGGGCCCAACATCCGAGAGGAACTACGGGCTGTTCTATCCGAGTGAGAAGAAGGTATATGAGATTCCGCTGACGGAGGAGGGGACGAAGGGCGTGGGGAGGAGCCAGGTTCCGGTGAGTGGAGAAGTTTCGGCGACGTCCCTCCGCGGCCAGACCTGGTGCGTCGCCAATGCCGCTTCTTCCCAGAATCAGCTCCAGGATGCTCTTAATTACGCTTGCGGAGAGGGTGGGGCCGATTGCACTCCCATTCAACCTGGTGCAACCTGTTTCAATCCTAACACCTTGGAGGCCCACGCTTCCTACGCCTTCAACAGTTACTATCAGAAGAAGGCACGTGCTGCCGGCACATGCCATTTTGGTGGCTCCGCTTTTGTCGTCACCCACCCTCCTAGTCAGTATACTTCTCCTCCTCTTCTTATTATTATTATTTTTCACTCTTCCCCACTATTCACACCACTCATTCCATCTTTTCTTCTTTTTGTGTTTTCAGAGTACGGCACTTGCCATTTCCCCACAGGATACTGA 1488 0.5168 KQSMPSLTLFLILISFVFSSSEAGSIGINYGRIANDLPTPEKVVELLKKEGLKRVKLYDTDASVLRAFAKSGMKVVVAMPNEVLGKAAADQSFTDAWVEANISRYYPATEIEGIAVGNEVFVDPNNSTKFLVAAMKNVHASLRKYNLETNIKISSPMALSALQTSFPSSAGSFKSELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYADNSDKISLDYALFKENPGVVDSGNGLKYTNLLDAQIDAVFAAMSALQYDDVKITVSETGWPSAGDSKEIGASPENAALYNGNLVRRVLTGSGTPLRPNDSVDVFLFALFNENEKTGPTSERNYGLFYPSEKKVYEIPLTEEGTKGVGRSQVPVSGEVSATSLRGQTWCVANAASSQNQLQDALNYACGEGGADCTPIQPGATCFNPNTLEAHASYAFNSYYQKKARAAGTCHFGGSAFVVTHPPSQYTSPPLLIIIIFHSSPLFTPLIPSFLLFVFSEYGTCHFPTGY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00400 495 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
Pste8g00400 495 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 444 IPR044965 GO:0004553|GO:0005975
Pste8g00400 495 SMART X8_cls 373 457 IPR012946 -
Pste8g00400 495 FunFam Glucan endo-1,3-beta-glucosidase 4 368 458 - -
Pste8g00400 495 Gene3D - 367 458 - -
Pste8g00400 495 Gene3D Glycosidases 24 351 - -
Pste8g00400 495 FunFam Glucan endo-1,3-beta-glucosidase 3 25 348 - -
Pste8g00400 495 Pfam X8 domain 373 444 IPR012946 -
Pste8g00400 495 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00400 Pste-Chr8 2071525 2073110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00400 18 453 Glycoside Hydrolase AT5G55180 68.721 0.0 632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00400 8 2071525 2073110 Pste8g00400 8 2071525 2073110 ECH