Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00393 ATGGAGCTGTGCACTCGAACCGTCACAAGTTTTCTTCTTTTGAACCCCTCTTTCTCTTCAAACTCTCTTCTTCTTCCTCGTCCCAACATTTGTACACCCTTCAAATTCAATTCCCTTAAGCTCTCATCTTTTTCGCCCCATATTCACCGCTTTCTCTCTCCTCCCACTTCTTCTCCTTTCACACTCTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCAGTTGCAGTTGCCGAAGAACAGGACCATCTTCCAGCAGAATTGAAGGTCACCGAAACAGAGCAACCCAATTCCAGAGTTAGATTGCATGTGGAGGTGCCACCATTGGTATGTGAGGATTGTTACAAAAGGGTCATAGCAGAGTTTATGAAGCAGGCAAAGATCCCTGGATTTCGTCCTGGAAAGAAAGTTCCAGAAAGCATTCTTATTAGTTATGTTGGGAGCAAAAATGTTCACAATGCTACTATCGAATCTATATTGAGGAGGACACTTTCGCATGCTATGACATCGGTTACTGGAAGGGCTTTGCAGGACTCTGTACAAATAGTGACTAAGTTTTCTGACATGGAGGAGACATATTCTTCTCTTGGGTCTCTTAGATATGATGTCCTTGTTGATATTGCTCCAGAAATCAAATGGATTCCTGATAATAATACATACAAAAATTTAAAGATTGTTGTTGAGATAGATAGTGATATAGATGCTCACAAAGCATCTGAACAAGAATTTAGAAGGCGATACAAGTCAATTGGCGCATTGAAAGTGGTTACTGACAGAGGACTACAGGTGACTAAATTTAATTTATGCCAGTCTTCTGGCTTTAATTTTGACACAGAAGATGGTGACAAAGTATTACCCGGTTTCCTTGATTCTATAATTGGAATCCAACGAGGCGAATCAAAGTCCTTTCCTCTTGTATTTCCTGAAACATGGAAGCAAGAAAATCTCCGTGGTGTTCATGCTCAATTTACTGTTGAATGCAGAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTATTGCTGATAAGCTTCTCCCTGGATGCACCACAGTGGAGCAGGTCAAAGACTTCTTGTTACAGAGATGCCTAGAAGTGGAGCAAACAGCTAGGGAACAAGCTACTGATAATGCTATCTTAGATCAGATTTCTAAGATGATAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGGCAGCTTTATGGAGCCAACCTATTAGAAATACAGGCAAAAATGAAACTAAATGAGCAGCAGCTGGCTTCTCTGTCAAGTCCAAAGGCTGTGAACGAATATCTTGAGCATCAGAAGGAAAATATAACAAATTTGATAAAACAGAATCTGGCAGTTGGTGATATATATAGGCGGGAAAATCTGCAGTTTGCTTCTGAGGACCTCCTCAAAGAGGTTGAGAATTCCATTGCTGAATTTAAACGTCAAAAACAAGAATATGATGAGGAACGGGTGAAGGAACAGGTTCAAGAAATATTAGAAGGGGCTAAAGTGCTTGAATGGTTGAGAGAACACGCAGAGATTCAGTATGTAACTAAATGAGGAAGGAGCACTAGCCAAAACAAATCAGAAACATGATATTGCAGGTTCATTTGAAAGAATTTTGTTTTGTGAGAAAATAAACTATTCTTATTGAATTTTTTTAAAAAAAAATATCAAGAATAGAACAATGTATTACAAGTTTGTACATTGAGACTGATGATAAATTAATAGTAGATAGATAGCACTAACAACAAACAGTATTGAAAAACAC 1819 0.3848 MELCTRTVTSFLLLNPSFSSNSLLLPRPNICTPFKFNSLKLSSFSPHIHRFLSPPTSSPFTLSASSSSSSSSSSSSSSSSSSSSSSASSVAVAEEQDHLPAELKVTETEQPNSRVRLHVEVPPLVCEDCYKRVIAEFMKQAKIPGFRPGKKVPESILISYVGSKNVHNATIESILRRTLSHAMTSVTGRALQDSVQIVTKFSDMEETYSSLGSLRYDVLVDIAPEIKWIPDNNTYKNLKIVVEIDSDIDAHKASEQEFRRRYKSIGALKVVTDRGLQVTKFNLCQSSGFNFDTEDGDKVLPGFLDSIIGIQRGESKSFPLVFPETWKQENLRGVHAQFTVECRELFYRDLPELDDSIADKLLPGCTTVEQVKDFLLQRCLEVEQTAREQATDNAILDQISKMIEVDIPQSLFEEQGRQLYGANLLEIQAKMKLNEQQLASLSSPKAVNEYLEHQKENITNLIKQNLAVGDIYRRENLQFASEDLLKEVENSIAEFKRQKQEYDEERVKEQVQEILEGAKVLEWLREHAEIQYVTK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00393 535 FunFam Trigger factor 267 351 - -
Pste8g00393 535 SUPERFAMILY FKBP-like 293 354 - -
Pste8g00393 535 Hamap Trigger factor [tig]. 103 531 IPR005215 GO:0015031
Pste8g00393 535 Coils Coil 481 512 - -
Pste8g00393 535 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 353 533 IPR027304 -
Pste8g00393 535 FunFam Chloroplast trigger factor 324 530 - -
Pste8g00393 535 Pfam Bacterial trigger factor protein (TF) C-terminus 367 524 IPR008880 GO:0006457|GO:0015031
Pste8g00393 535 SUPERFAMILY Trigger factor ribosome-binding domain 103 230 IPR036611 GO:0006457|GO:0015031
Pste8g00393 535 Gene3D - 351 535 IPR037041 GO:0006457|GO:0015031
Pste8g00393 535 Gene3D - 243 350 IPR046357 GO:0003755
Pste8g00393 535 Gene3D - 103 242 IPR036611 GO:0006457|GO:0015031
Pste8g00393 535 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 58 517 IPR005215 GO:0015031
Pste8g00393 535 FunFam Trigger factor 103 226 - -
Pste8g00393 535 MobiDBLite consensus disorder prediction 63 91 - -
Pste8g00393 535 Pfam Bacterial trigger factor protein (TF) 104 243 IPR008881 GO:0006457|GO:0015031
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00393 8 2027887 2033581 Pste8g00393 8 2027887 2033581 ECH