Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00342 ATGATTGAGCCACGTGGTCAGCGATGGGTAAAGGTAAATGTGAATTGGAGTAGAGGGAAGAATGAACAGGTTCCTGTCACTTGCATCATGGAATCCCCACAGTCGGTTGTCTCTCCATTTTTGGGTGAAGCTGATATTTTCACACGTCCATTGTCTAAGGACATCGAACCCAATGGAAAGGAAGCAGCCATGTCTAATCCGGAGGAATTCATTGGTGTTGTCGATGTTTACATTCATCAGGCCAGGGACATTCATAATATCTGCATATACCACAAGCAAGATGTTTACGCTAAGATTTGCTTGACTAGTAATCCTGAGAACACTGTCTCTACCAAGACTATCAATGGAGGAGGAAGGAACCCCGTCTTTAATGAGAATCTGCGTCTAAACGTTAGGACTGTTGATTCTGCTGTCAAATGTGAAATTTGGATGTTGAGTAGGGTTAAGAATTATCTTGAAGATCAGTTGCTTGGTTTTGTTCTGGTGCCGTTGTCTCAAGTACTTGTTAAGGATGGCAAATTAGAGAAAGAGTTCTCTCTTTCCTCAACTGATCTATTCCATTCCCCAGCAGGTTTTGTTCAATTGTCTCTCGCTTACACTGGCTCTTCGCCTGATGTTATGGCAATTTCTGCAATGCCTACTGAGTTACCCGCCAGTGTCACTGAAAAAGACTCTGAATCATGCGAGTCACTGGTCAGAGATTTAGACAAAATTGAATTCCCTGATCCAAAAATTGTAAATGAAGACCGCTTGATGGTTTCAGAATATTTTGGCATTTCATGTGAGGAGAGTCAGTGTTCTGATAGCTTGACCACTACTGATACTGAAAATCTTAGTTCCGAAGCAGGTGTTCAATTAGTGGAAAGCTTCTCAGCATGCAGTGTTGAATCTGTCCAACCTCCTAAGGTTGATTCTCCACCTAACAGTGTGTCAACAAATGGGGTTTCATCTCCTTCGGTGGCTGCAAGTTCAGACTCATCTGATGTTGCTGCTTCCAAGTCTCCCAATCCAGAACAAGTTTCTGGTACTAAAGAGAAAAATGGGGATGCCAAAGATGGTGAGAGTGATTCCTCAAATGCGGTACTGAATGAGTCATTCCCTAAGCCTCTCGTGACAGTTAACATTGAACCAGAGCCAAATGTGGTGCAGCAGGATTTTGTAGACATGTACATGAAAAGTATGCAACAATTCACCGAGTCATTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCTGAACAGAAGATACAGACACCAAAGAGCAGCAACTCCCGGGTGTTTTACGGTAGCAGAGCTTTCTTCTGAACTTTTGGTTTCCTTTGGTTCATGGGAATACTTTCAGGTGACTTAGATTTTAGAACCAAAACTGATATCAGTAGTGAAATGAAATAATGCGCCAACCAGTGTGATTGTCTCTTTTGTACTCGTTGATCTGTTATAGGTAACAGGGAATCTTAACTTTGTACTCTCACAGGCTTGGTCGTATCTTAACTGCTACATGAACTTTTTCTGTCTTAATCTTATTTCCCTGTGTTTCTTTTTGTTTTGGATGTCAATATTTGTGAAAGCTGATTTCATTCATCCAGCAAAAGGTT 1625 0.4166 MIEPRGQRWVKVNVNWSRGKNEQVPVTCIMESPQSVVSPFLGEADIFTRPLSKDIEPNGKEAAMSNPEEFIGVVDVYIHQARDIHNICIYHKQDVYAKICLTSNPENTVSTKTINGGGRNPVFNENLRLNVRTVDSAVKCEIWMLSRVKNYLEDQLLGFVLVPLSQVLVKDGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGSSPDVMAISAMPTELPASVTEKDSESCESLVRDLDKIEFPDPKIVNEDRLMVSEYFGISCEESQCSDSLTTTDTENLSSEAGVQLVESFSACSVESVQPPKVDSPPNSVSTNGVSSPSVAASSDSSDVAASKSPNPEQVSGTKEKNGDAKDGESDSSNAVLNESFPKPLVTVNIEPEPNVVQQDFVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKIQTPKSSNSRVFYGSRAFF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00342 444 MobiDBLite consensus disorder prediction 297 364 - -
Pste8g00342 444 Gene3D C2 domain 68 217 IPR035892 -
Pste8g00342 444 MobiDBLite consensus disorder prediction 297 343 - -
Pste8g00342 444 CDD C2 74 180 - -
Pste8g00342 444 SMART C2_3c 73 176 IPR000008 -
Pste8g00342 444 Pfam C2 domain 73 178 IPR000008 -
Pste8g00342 444 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 68 202 IPR035892 -
Pste8g00342 444 ProSiteProfiles C2 domain profile. 55 178 IPR000008 -
Pste8g00342 444 PANTHER EXPRESSED PROTEIN 61 444 - -
Pste8g00342 444 MobiDBLite consensus disorder prediction 412 438 - -
Pste8g00342 444 MobiDBLite consensus disorder prediction 408 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00342 Pste-Chr8 1833013 1838463 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00342 8 1833013 1838463 Pste8g00342 8 1833013 1838463 ECH
Pste7g01388 7 12598463 12599749 Pste8g00342 8 1833013 1838463 PCT