Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00341 GTTGGTTCCCGAGGGAAAAGTGTTCTTCAACTTCACCATTCCAGCTTCCTTTCGGAGTACACTACACTAGTAGAAACATCAAACACCTTCTCTGCACGCAAAAACCGCGAAAACTAGAAAGTGAATCGAAGATGCAGAGATTCAAAGCTCTGCTTCCGCAAAGTAGGTCCTCACTTGGCATTCTCTGTTCTCATCGTCAACCTTTCTCTGCTCAACCAAATTACACAGAGCACAACGACGACGATTCTCAGGAACAGATTTTAGTTGAAGGAAGAGCGAAATCGCGAGCAGCTATTCTCAACAGGCCGTCTTCGCTGAATTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCCTGGGAAGAGAACTCTGATATTGGCTTTGTTTTGATGAAGGGTAGTGGTAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGCTGTATCACTCACTCAATGAAGGAAATACTGATGAAGCTGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTCCAAGGGACATATCTTAAACCACATGTTGCCATATTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTTTACCAGGGATGTTCCGAGTGGTAACTGATAAGACTATTTTTTCTCACCCAGATGCTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATAATTTGTCTCGTTTACCTGGCTACTTAGGGGAATATTTGGCCCTTACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCGGCCTTGCCACTCATTATTCACTAAATGCAAGGCTTGCTATGCTTGAAGAACGCCTTGGTAAACTGATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTTACAGGATTGATACTATAGATAGATGTTTCAGTCACGAAACTGTGGAGGAAATTATTGAATCTTTGGAGAAAGAGGCTGCTGAGTCTTCTGATGAGTGGTTCTCGACTACTCTAAGGAGATTAAGAGAAGCCTCCCCGTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACTCTTGATAAATGTCTAGTACGTGAGTACCGCATGTCCCTTCGAGGAATATCTAAGCATGTCTCCTCTGATTTCTTCGAGGGTGTTCGAGCAAGAATGGTTGATAAAGATTTTGCACCGAAGTGGGACCCACCTAGTTTAAAAGATATATCAGAGGACATGGTTGATTACTATTTCTCTCCATTAAGCGCAGTTGAGTCTGAACTGGTACTGCCAACGGCTTTACGAGAACCTTACATGTGAAACTAGCATGCCTCTAAGCAATGCTCTTCACTAACTAGCAAGGATTTTATTTAATAATAATTCCGGATAAAGAAGCGTTGATGCGTTTGACAGATGCACCATGAACTATCGCATTCACCTGCTTTTGACAAAACTTCCACCCCCCAACTGTTCCTGTTGTACTATCTGTCGGGTTATCGGATGAGCTCTCTAATGTTTATCTTTGTCCTTAATATGTGGTGTAGTGTAATGTTGGCCCCATAAATATAAGTGAAAGGATCATATCTGCTTTCGTTGTTTGCTCTCATTTCGATTATCTTGAAAAGCCAGCGCTGTCGTGTACTGAAAACACGAATCAAGGGCTTGGTGACATCGTCAGACAAAGAAACATACCATGGCCATGTAAGTTTGAAGTCAAGGAAGACTGTCCACTGTAATGTGGTTGAATAAACATCTGAAGTACTTATTTAGTAAAATTTTTTTAATTATTTTTTTGGTTTATGAAATGACTTAT 1845 0.4108 MQRFKALLPQSRSSLGILCSHRQPFSAQPNYTEHNDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYHSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTIFSHPDAQIGFHPDAGASYNLSRLPGYLGEYLALTGDKLNGVEMIACGLATHYSLNARLAMLEERLGKLITDEPSVVEASLAQYGDLVYPDRSSVLYRIDTIDRCFSHETVEEIIESLEKEAAESSDEWFSTTLRRLREASPLSLKVTLQSIREGRFETLDKCLVREYRMSLRGISKHVSSDFFEGVRARMVDKDFAPKWDPPSLKDISEDMVDYYFSPLSAVESELVLPTALREPYM 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00341 406 Coils Coil 276 296 - -
Pste8g00341 406 Gene3D - 36 400 - -
Pste8g00341 406 SUPERFAMILY ClpP/crotonase 48 371 IPR029045 -
Pste8g00341 406 CDD crotonase-like 56 220 - -
Pste8g00341 406 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
Pste8g00341 406 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 37 401 - -
Pste8g00341 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 37 400 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00341 Pste-Chr8 1829839 1839522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00341 20 406 Acyl Lipid Metabolism Gene Families AT4G31810 71.282 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00341 8 1829839 1839522 Pste8g00341 8 1829839 1839522 ECH