Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00338 AATACTAGTCTGTCTCTAATTAAAAGCACTTCTAACCCCCCACAACCGCACTCGATTCCCATTCAAGGCCTAACAACATTTCGTGCTCCTTAATTTCAAGCGCCATCATCATTAGTATCATATCAGAATCATAATCTTGGTGTGATCTTCTGGGTGTTTCAATTTCAACCATTTGGGTTGATAACATGATGATTCGATTTCCATTGGTGGTTCTTGTGTTGATAATTGGTGCCTTGAGATGCAGAATGGCTAGAGCTGAACAAAGTCCTGGTTCTGGGAATGTTTACACGCTAGCTTCAGTTAGGGAGGATTTGGTTAGGCAAGAAGATACCATCATTTATGGTCTCATTGAGAGAGCTAAGTTTCCCAGCAATTCTCACACCTATGATGAAAAGTATGCTCAAATCCCACACTTCTGTGGCTCATTGGTGGAATTCGTTGTTAAGAATACAGAGGCCCTTCAAGCTAAGGCTGGAAGATACAAAAACCCTGAAGAAAACGCCTTCTTCCCAGAAAACTTATCACCATCAATTGTGCCATCTTACCCCTTCAAACAGTTTCTGCATCCGGGAGCTGCTTCAATTAACATAAACAAGTCCATATGGAAAATGTATTTCCAAGATTTACTTCCATTGCTTGCTACTCCGGGTGATGATGGCAACTATGCTCAAACTGCAGCTAATGATCTTTCATTATTGCAGGCCATCTCTAGAAGGGTCCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATTCTCCTGAAGATTACGAGCCTTTAATTCGAGCTAAGGATAAAGAAGGATTGATGAAATTGTTGACATTTACAAGCGTTGAAGAGAGTGTGAGGAAGAGGGTTGAGAAGAAGGCCTCAGTGTTTGGGCAGGAAGTGAGTCTTGAGAGTGTTGATAATGACAATAAAAAACGCAAGTTTGATCCAACAGTGGCTTCTAGCTTGTACAAAAATTGGGTCATACCTCTTACCAAGGAGGTTCAGGTTGAGTACCTCTTGCGCCGTCTAGACTGAAGGCATTGCAATGCAGTTAGAATTTAGAAATAATGGAAGATGAACATGATGTTGTTGTTCAAATGATTAAGCTCTTCAGTGATACCTTATTGCCAATTTCATGTAGCTGTTGTCTTTTGATTCAAAAATGTTATTTGCTGCTTTAGATTGTTACGTTTATTTTCATCGGCACTATTAGATGAGATTTTTTCACCTTAACTAATAGTCTTGAGTTGGTTAAAATATTTCAGATGGGAGAATTTTATTGAGGGTCTTAGTCAATTCAAGCAAAATTATCTTTTAAAATGATAAATGTTATCTATGAAAAAGTATGACCTTTTAATGAAAACATTTTCAT 1365 0.3846 MMIRFPLVVLVLIIGALRCRMARAEQSPGSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNSHTYDEKYAQIPHFCGSLVEFVVKNTEALQAKAGRYKNPEENAFFPENLSPSIVPSYPFKQFLHPGAASININKSIWKMYFQDLLPLLATPGDDGNYAQTAANDLSLLQAISRRVHYGKFVAEVKFRDSPEDYEPLIRAKDKEGLMKLLTFTSVEESVRKRVEKKASVFGQEVSLESVDNDNKKRKFDPTVASSLYKNWVIPLTKEVQVEYLLRRLD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00338 280 FunFam Chorismate mutase 28 280 - -
Pste8g00338 280 SUPERFAMILY Chorismate mutase II 31 280 IPR036263 GO:0046417
Pste8g00338 280 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 30 280 IPR037039 GO:0004106|GO:0009073
Pste8g00338 280 PANTHER CHORISMATE MUTASE 29 280 IPR008238 GO:0004106|GO:0009073
Pste8g00338 280 PIRSF Chor_mut_AroQ_eu 22 280 IPR008238 GO:0004106|GO:0009073
Pste8g00338 280 NCBIfam chorismate mutase 35 280 IPR008238 GO:0004106|GO:0009073
Pste8g00338 280 ProSiteProfiles Chorismate mutase domain profile. 27 280 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00338 Pste-Chr8 1825117 1827890 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00338 8 1825117 1827890 Pste8g00338 8 1825117 1827890 ECH
Pste8g00338 8 1825117 1827890 Pste2g01535 2 16419429 16421460 PCT