Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00310 ATGGAACAGGAATACTGGGGTTAACGTTGTTTTAGCACAGCCATGGCTTCGTTTCTTCCTGCCACAACAGAGTCACTTGCTCTGGCAATGGATGCAGATGAACCGTCTGAGAAAATCTCAATTCTATATCGAATACTTGATGATCCTTCTTCTTCTGCAGATGCCCTGCGCATGAAAGAGCAAGCCATCACAAACCTCACTGAGCAACTCAGGACAGAGAATAGGGCAGAGGATCTGCGCTGCCTTCTTACTCAGTTGAGGCCCTTCTTTTCCTTGATTCCTAAGGCAAAAACTGCAAAGATTGTGAGGGGCATAATTGATTCTGTTGCTAAAATACCGGGGACTTCTGATCTACAAATCACACTCTGCAAAGAAATGGTGCAATGGACTCGTGCTGAGAAGCGTACCTTTCTGAGGCAGCGAGTTGAGGCAAGACTTGCAGCACTTCTTATGGAAAGTAAGGAATATTCTGAAGCTTTGACTCTCCTCAGTGGTCTGGTCAAGGAAGTTAGAAGGCTAGATGACAAGCTTCTACTTGTAGACATAGACTTGCTGGAAAGCAAGCTACACTTCTCCTTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACAGCTGCAAGAACAGCTGCCAATGCTATTTATGTCCCTCCAGTTCAACAAGGTGCCATAGATCTGCAGAGTGGGATTCTTCACGCAGAGGAGAAGGATTACAAAACGGCATATAGTTATTTCTTTGAAGCTTTTGAGTCTTTCAACGCACTTGATGACCCCAAGGCTGTTTTTAGCCTGAAATATATGTTGTTGTGTAAGATCATGGTGAGTCAAGCTGATGATGTGGCAGGAATTATATCTTCTAAAGCTGGCCTTCAATACCTAGGACCCGACTTGGATGCCATGAAAGCCGTCGCAGACGCTCATTCTAAGCGATCTCTTAAGTTATTTGAAGTCGCTCTGCGAGATTACAAGGCTCAGTTGGAGGAAGACCCAATTGTCCACAGGCACCTGTCATCCCTGTATGATACTCTCATGGAGCAGAACCTTTGCAGATTGATTGAACCATTTTCAAGGGTTGAGATTGCACACATTGCTGAACTAATTGAACTTCCTGTTGATCACGTGGAGCGAAAATTGTCTCAGATGATTTTGGACAAGAAGTTTGCTGGGACATTGGATCAAGGAGCTGGATGCCTTGTCATATTTGATGATCCCAAAACTGATGCAATATACCCTGCAACCTTAGAAACCATTTCTAACGTTGGGAAAGTCGTGGACAGTCTTTATGTTAGGTCTGCCAAGATAATGACATGAACACTCCGTCGGCTCACTTCATTTGGTAATTGCTACAATACTTTTTCATGTTCTCTTCACAATTTATTAGGATGTCATTTGTTTATTTTTCTTAATTTGTCAGACTTGGAAGAGCTTTTAGCTTTTGAATCCATTGGTCCTTGAACCACTTCAGGTGCTTCTGATTAAAAGATGTTTTGATGATCTGATCTTTATAGAAAATGTGAGCTTTGACTCACTTGTAGTCTGAAATTACACGTATTCACCTAGTGGATGAAGATTAGATAATTCGAATCTCGAATCC 1591 0.4261 MASFLPATTESLALAMDADEPSEKISILYRILDDPSSSADALRMKEQAITNLTEQLRTENRAEDLRCLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQITLCKEMVQWTRAEKRTFLRQRVEARLAALLMESKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPVQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALDDPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYLGPDLDAMKAVADAHSKRSLKLFEVALRDYKAQLEEDPIVHRHLSSLYDTLMEQNLCRLIEPFSRVEIAHIAELIELPVDHVERKLSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00310 421 Coils Coil 125 145 - -
Pste8g00310 421 ProSiteProfiles PCI domain profile. 222 390 IPR000717 -
Pste8g00310 421 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 319 402 IPR000717 -
Pste8g00310 421 Pfam PCI domain 284 385 IPR000717 -
Pste8g00310 421 FunFam 26S proteasome non-ATPase regulatory subunit 11 45 420 - -
Pste8g00310 421 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 16 127 IPR040773 -
Pste8g00310 421 SUPERFAMILY "Winged helix" DNA-binding domain 313 395 IPR036390 -
Pste8g00310 421 Pfam 26S proteasome subunit RPN6 C-terminal helix domain 392 417 IPR040780 -
Pste8g00310 421 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 33 417 - -
Pste8g00310 421 Gene3D - 45 420 - -
Pste8g00310 421 SMART PCI/PINT associated module 142 318 - -
Pste8g00310 421 SUPERFAMILY TPR-like 128 324 IPR011990 GO:0005515
Pste8g00310 421 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00310 Pste-Chr8 1676174 1679208 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02069 2 20864346 20865614 Pste8g00310 8 1676174 1679208 PCT