Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00304 ATGATGAGAAGGCACTCCCTTCTGACTTCAACACCCAAACGAGTTTCCCTTGTCTTTGTTGCTCACATCCACTCAAAAACTCATCCTCACACCCTTTTGGGTGTACCCAAACAAGTGTCCCAAACTCATAATCATTACCCCAAACCCAGTTTCAGTTTCAATCCCTTCTTGCATATTTTCAATCACAGGGTCAACACCTTACACACTGCACAACATGTTGAAGTGAATGAGGTTGTAGGAGATGTGTGGATGAGAATGCAAGAAGAAGCCACACTAGATGTGACTGTGGAACCTATTTTGTCCAGTTACTACAACACTTCCATTCTCTCTCACAGATCATTGCAGACCGCCTTGGCCAATCACCTTGCCACCAAACTCAGCAGTTCAAGCCTTCCTAGCAACACCCTTTGTGATCTTTTTGTGAAGGTTTTGGAAACGGATGAAGCCATCATGGATGCTGTGAAGAATGATCTGAGGGCAGTGAAGGAGCGAGACCCTGCTTGCACAAGCTACGTTCACTGCTTCCTGAATTTCAAAGGCTTTCTGGCATGCCAAGCTCATAGGGTGGCTAACAAATTGTGGCTACAGGGAAGGAAGGTTGTGGCTGTCATGATTCAGAACCGTGTTTCTGAAGTTTTTGCGGTGGATATCCATCCGGGGGCTAAGATTGGAAGTGGGATTTTGCTGGATCATGCAACTGGGATTGTGGTGGGAGAGACTGCTGTGATAGGGAACAATGTCTCAATTCTGCATAGTGTCACATTAGGAGGGACTGGTAAGGAATCTGGGAATAGGCACCCCAAGATTGGTGATGGGGTGCTGATAGGTGCAGGAACTTGTATATTGGGGAATATTACGGTTGGTGATGGAGCTAAGATCGGTGCTGGTTCGGTGGTCATCAAGGATGTGCCTCCAAGGACTACTGTTGTTGGGAACCCGGCTCATTTAGTAGGAGGGAAGCACAACCCTGTTAAGTTGGATAAGATTCCCAGCTTCACCATGGACCATACTTCACATATTGGTGAATTTTATGATTATTGTGTTTAG 1047 0.4613 MMRRHSLLTSTPKRVSLVFVAHIHSKTHPHTLLGVPKQVSQTHNHYPKPSFSFNPFLHIFNHRVNTLHTAQHVEVNEVVGDVWMRMQEEATLDVTVEPILSSYYNTSILSHRSLQTALANHLATKLSSSSLPSNTLCDLFVKVLETDEAIMDAVKNDLRAVKERDPACTSYVHCFLNFKGFLACQAHRVANKLWLQGRKVVAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGIVVGETAVIGNNVSILHSVTLGGTGKESGNRHPKIGDGVLIGAGTCILGNITVGDGAKIGAGSVVIKDVPPRTTVVGNPAHLVGGKHNPVKLDKIPSFTMDHTSHIGEFYDYCV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00304 348 SMART SATase_N_2_a 82 186 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pste8g00304 348 SUPERFAMILY Trimeric LpxA-like enzymes 81 317 IPR011004 -
Pste8g00304 348 PANTHER SERINE ACETYLTRANSFERASE 71 347 - -
Pste8g00304 348 CDD LbH_SAT 213 313 IPR045304 -
Pste8g00304 348 FunFam Serine acetyltransferase 216 341 - -
Pste8g00304 348 Gene3D serine acetyltransferase, domain 1 64 215 IPR042122 -
Pste8g00304 348 NCBIfam serine O-acetyltransferase 154 314 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pste8g00304 348 Pfam Serine acetyltransferase, N-terminal 82 186 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pste8g00304 348 Coils Coil 144 164 - -
Pste8g00304 348 Pfam Bacterial transferase hexapeptide (six repeats) 266 300 IPR001451 -
Pste8g00304 348 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 275 303 IPR018357 GO:0016740
Pste8g00304 348 Gene3D Hexapeptide repeat proteins 216 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00304 Pste-Chr8 1659128 1660174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00304 82 344 Miscellaneous Gene Families AT2G17640 52.471 3.74e-89 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00304 8 1659128 1660174 Pste8g00304 8 1659128 1660174 ECH
Pste7g01419 7 13012781 13013935 Pste8g00304 8 1659128 1660174 PCT