Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00292 ATGGGAGTGGGAACCACAGAAGATTGGCCTCACCTTGAATATGCATTTGCAGAGTTCACTCGAGCTTTGCTGGCTGACCTCACCAACGGTCGCTCGCCGCTCGTTCTTATCGATCGCTTCCGAAGCTACTGCACGCTTCCCAACTCCAACTGCTTTTGTGCCTCGGATTTGGCGTGCGGAAAGGAAGTTCTCACACTCCGCAGCAAATCCCACGCTCACAGACTAGTCGTCATGTTCAGAGTGATGCTGATAGTTCAGAAACTTTTGCAAGAGAACAGGCATAGTTCCAAGAGAGACATTTATTACACGTATCCTTCTGTTTTTCTGGATCAGTCAGTGGTGGATCAAGCAATTAATGATATATGTATTCTTATGCAGTGCAGTCGCCATAACCTTAATGTGGTTTCCGCAGGGAACGGATTAGTCATGGGCTGGATAAGATTCTCTGAAGGAGAAAGGGTATTTGACTGCATTAGTTCTCCCAACACTGCCCATCCTGTCCCTGTACATGTTGAAGAAGTTCAAGTGAATGATGAGAAACATTGCTTGACATTGTGCATAGATATCATTAGTGTTGCCCGTTACATATTAGTTGTTGAGAAAGAATCAGTTTTCCAAAGACTAGCAAACGACCAATTCTGCAATGCAAATCATTGTATTGTCATCACTGGAAGAGGCTATCCAGATATTCCTACCAGAAGGTTTCTGCGACTTCTGGTTGAAAATTTGGGCCTACCTGCTTATTGCTTGGTAGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCCATGCAAATGGCTTACAACACGAAACATCTTCGTGTCCCCGAGATACACTGGCTTGGAGCTTTTCCTTCAGATTCTGAGAGATATTTTGTTCCAAAGCAGTGTCTCCTTCCTTTGACTGCTGAAGACAAAAGAAAAGTTGAAGCCATGCTACTTAGATGCTACCTTCAAAGGGAGGTACCACAATGGAGGTTGGAGCTAAAGCTGATACTGCAACAAGGAGTGAAGTTTGAGATTGAAGCCTTATCTGTGCACGCACTTTCATTCTTGTCAGAGTCTTACATACCATCTAAAATTGAAGGTAACCTTATAATGTAGCATGTTTGACATTAATGTGTAAGCTCTATACAAGCAACCGGGCTAAGGCTATGACCCTGTCCTGTCTCTGCT 1191 0.4374 MGVGTTEDWPHLEYAFAEFTRALLADLTNGRSPLVLIDRFRSYCTLPNSNCFCASDLACGKEVLTLRSKSHAHRLVVMFRVMLIVQKLLQENRHSSKRDIYYTYPSVFLDQSVVDQAINDICILMQCSRHNLNVVSAGNGLVMGWIRFSEGERVFDCISSPNTAHPVPVHVEEVQVNDEKHCLTLCIDIISVARYILVVEKESVFQRLANDQFCNANHCIVITGRGYPDIPTRRFLRLLVENLGLPAYCLVDCDPYGFDILTTYRFGSMQMAYNTKHLRVPEIHWLGAFPSDSERYFVPKQCLLPLTAEDKRKVEAMLLRCYLQREVPQWRLELKLILQQGVKFEIEALSVHALSFLSESYIPSKIEGNLIM 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00292 372 FunFam DNA topoisomerase 6 subunit A 138 372 - -
Pste8g00292 372 CDD TOPRIM_TopoIIB_SPO 194 356 IPR034136 -
Pste8g00292 372 Gene3D - 17 137 IPR036388 -
Pste8g00292 372 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 18 367 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 SUPERFAMILY DNA topoisomerase IV, alpha subunit 72 367 IPR036078 GO:0003677|GO:0005694
Pste8g00292 372 PRINTS SPO11 homologue signature 103 123 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pste8g00292 372 PRINTS SPO11 homologue signature 257 276 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pste8g00292 372 PRINTS SPO11 homologue signature 292 316 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pste8g00292 372 PRINTS SPO11 homologue signature 353 372 IPR013048 GO:0003677|GO:0003918|GO:0042138
Pste8g00292 372 PRINTS DNA topoisomerase VI subunit A family signature 97 108 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 PRINTS DNA topoisomerase VI subunit A family signature 129 144 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 PRINTS DNA topoisomerase VI subunit A family signature 111 128 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 PRINTS DNA topoisomerase VI subunit A family signature 252 268 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 PRINTS DNA topoisomerase VI subunit A family signature 196 213 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 PRINTS DNA topoisomerase VI subunit A family signature 220 241 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pste8g00292 372 Pfam Type IIB DNA topoisomerase 74 134 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Pste8g00292 372 Gene3D - 139 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00292 Pste-Chr8 1599845 1603412 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00292 8 1599845 1603412 Pste8g00292 8 1599845 1603412 ECH